RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 TNP1P09430 55 aa-4.77□□□□□ -3.17
LMBR1-222ENST00000638959 IGLC6P0CF74 106 aa-4.77□□□□□ -3.17
LMBR1-222ENST00000638959 TRIQKQ629K1 86 aa-4.77□□□□□ -3.17
LMBR1-222ENST00000638959 ARMS2P0C7Q2 107 aa-4.78□□□□□ -3.17
LMBR1-222ENST00000638959 KCNRGQ8N5I3 272 aa-4.78□□□□□ -3.17
LMBR1-222ENST00000638959 WFDC9Q8NEX5 89 aa-4.78□□□□□ -3.17
LMBR1-222ENST00000638959 SCN7AQ01118 1682 aa-4.79□□□□□ -3.18
LMBR1-222ENST00000638959 ABCC10Q5T3U5 1492 aa-4.79□□□□□ -3.18
LMBR1-222ENST00000638959 A0A1B0GX51 115 aa-4.79□□□□□ -3.18
LMBR1-222ENST00000638959 EHBP1L1Q8N3D4 1523 aa-4.8□□□□□ -3.18
LMBR1-222ENST00000638959 KRTAP19-6Q3LI70 58 aa-4.8□□□□□ -3.18
LMBR1-222ENST00000638959 GID8Q9NWU2 228 aa-4.8□□□□□ -3.18
LMBR1-222ENST00000638959 TIAM2Q8IVF5 1701 aa-4.8□□□□□ -3.18
LMBR1-222ENST00000638959 GUCA1AP43080 201 aaPredicted RBP-4.81□□□□□ -3.18
LMBR1-222ENST00000638959 C12orf73Q69YU5 71 aa-4.81□□□□□ -3.18
LMBR1-222ENST00000638959 DEFB106AQ8N104 65 aa-4.81□□□□□ -3.18
LMBR1-222ENST00000638959 ZFHX4Q86UP3 3567 aa-4.81□□□□□ -3.18
LMBR1-222ENST00000638959 GNGT1P63211 74 aa-4.82□□□□□ -3.18
LMBR1-222ENST00000638959 TFAMQ00059 246 aaKnown RBP-4.82□□□□□ -3.18
LMBR1-222ENST00000638959 TCHHQ07283 1943 aa-4.83□□□□□ -3.18
LMBR1-222ENST00000638959 SNRNP25Q9BV90 132 aaKnown RBP-4.83□□□□□ -3.18
LMBR1-222ENST00000638959 FREM2Q5SZK8 3169 aa-4.83□□□□□ -3.18
LMBR1-222ENST00000638959 PCBD2Q9H0N5 130 aa-4.84□□□□□ -3.18
LMBR1-222ENST00000638959 MAGI2Q86UL8 1455 aa-4.84□□□□□ -3.18
LMBR1-222ENST00000638959 MMP24-AS1A0A0U1RRL7 71 aa-4.85□□□□□ -3.19
LMBR1-222ENST00000638959 H3BQF6 201 aa-4.85□□□□□ -3.19
LMBR1-222ENST00000638959 LINC00694P0DN24 101 aa-4.85□□□□□ -3.19
LMBR1-222ENST00000638959 SFTA2Q6UW10 78 aa-4.85□□□□□ -3.19
LMBR1-222ENST00000638959 DEFB107AQ8IZN7 70 aa-4.85□□□□□ -3.19
LMBR1-222ENST00000638959 ARL11Q969Q4 196 aa-4.85□□□□□ -3.19
LMBR1-222ENST00000638959 PREX1Q8TCU6 1659 aa-4.86□□□□□ -3.19
LMBR1-222ENST00000638959 CUX1P39880 1505 aa-4.86□□□□□ -3.19
LMBR1-222ENST00000638959 H0Y9P7 68 aa-4.86□□□□□ -3.19
LMBR1-222ENST00000638959 S100GP29377 79 aa-4.86□□□□□ -3.19
LMBR1-222ENST00000638959 ROCK1Q13464 1354 aa-4.87□□□□□ -3.19
LMBR1-222ENST00000638959 ABCC5O15440 1437 aa-4.88□□□□□ -3.19
LMBR1-222ENST00000638959 C3orf79P0CE67 100 aa-4.88□□□□□ -3.19
LMBR1-222ENST00000638959 TRAPPC2P0DI81 140 aa-4.88□□□□□ -3.19
LMBR1-222ENST00000638959 TRAPPC2BP0DI82 140 aa-4.88□□□□□ -3.19
LMBR1-222ENST00000638959 SPANXDQ9BXN6 97 aa-4.88□□□□□ -3.19
LMBR1-222ENST00000638959 OVOS2A0A0J9YW53 1432 aa-4.89□□□□□ -3.19
LMBR1-222ENST00000638959 OVOS2Q6IE36 1432 aa-4.89□□□□□ -3.19
LMBR1-222ENST00000638959 DIP2CQ9Y2E4 1556 aa-4.89□□□□□ -3.19
LMBR1-222ENST00000638959 LINC00158P58513 81 aa-4.89□□□□□ -3.19
LMBR1-222ENST00000638959 PRO3102Q9H379 93 aa-4.89□□□□□ -3.19
LMBR1-222ENST00000638959 LINC00474Q9P2X8 69 aa-4.89□□□□□ -3.19
LMBR1-222ENST00000638959 PLXNC1O60486 1568 aa-4.9□□□□□ -3.19
LMBR1-222ENST00000638959 UBE2L5PA0A1B0GUS4 154 aa-4.9□□□□□ -3.19
LMBR1-222ENST00000638959 J3QR89 54 aa-4.9□□□□□ -3.19
LMBR1-222ENST00000638959 SKA2Q8WVK7 121 aaPredicted RBP-4.9□□□□□ -3.19
LMBR1-222ENST00000638959 TARBP1Q13395 1621 aaKnown RBP-4.9□□□□□ -3.19
LMBR1-222ENST00000638959 DEFB4AO15263 64 aa-4.91□□□□□ -3.2
LMBR1-222ENST00000638959 UBE2L3P68036 154 aaKnown RBP-4.91□□□□□ -3.2
LMBR1-222ENST00000638959 MORN2Q502X0 79 aa-4.91□□□□□ -3.2
LMBR1-222ENST00000638959 KIF20BQ96Q89 1820 aa-4.91□□□□□ -3.2
LMBR1-222ENST00000638959 CPSF1Q10570 1443 aaKnown RBP-4.91□□□□□ -3.2
LMBR1-222ENST00000638959 PRUNE2Q8WUY3 3088 aa-4.91□□□□□ -3.2
LMBR1-222ENST00000638959 DBIP07108 87 aaKnown RBP-4.92□□□□□ -3.2
LMBR1-222ENST00000638959 Q56UQ5 140 aa-4.92□□□□□ -3.2
LMBR1-222ENST00000638959 CEP152O94986 1710 aa-4.92□□□□□ -3.2
LMBR1-222ENST00000638959 A2ML1A8K2U0 1454 aa-4.93□□□□□ -3.2
LMBR1-222ENST00000638959 RGPD8O14715 1765 aaPredicted RBP-4.93□□□□□ -3.2
LMBR1-222ENST00000638959 RGPD5Q99666 1765 aa-4.93□□□□□ -3.2
LMBR1-222ENST00000638959 TSPAN19P0C672 248 aa-4.93□□□□□ -3.2
LMBR1-222ENST00000638959 HSD52Q0P140 79 aa-4.93□□□□□ -3.2
LMBR1-222ENST00000638959 CCDC153Q494R4 210 aa-4.93□□□□□ -3.2
LMBR1-222ENST00000638959 PSMG4Q5JS54 123 aa-4.93□□□□□ -3.2
LMBR1-222ENST00000638959 AIF1LQ9BQI0 150 aa-4.93□□□□□ -3.2
LMBR1-222ENST00000638959 FYCO1Q9BQS8 1478 aa-4.94□□□□□ -3.2
LMBR1-222ENST00000638959 K7ERU9 68 aa-4.94□□□□□ -3.2
LMBR1-222ENST00000638959 SMIM21Q3B7S5 101 aa-4.94□□□□□ -3.2
LMBR1-222ENST00000638959 LSM10Q969L4 123 aaKnown RBP-4.94□□□□□ -3.2
LMBR1-222ENST00000638959 MANBALQ9NQG1 85 aa-4.94□□□□□ -3.2
LMBR1-222ENST00000638959 COX6CP09669 75 aa-4.95□□□□□ -3.2
LMBR1-222ENST00000638959 SPANXCQ9NY87 97 aa-4.95□□□□□ -3.2
LMBR1-222ENST00000638959 C7orf77A4D0Y5 90 aa-4.96□□□□□ -3.2
LMBR1-222ENST00000638959 COMMD6Q7Z4G1 85 aa-4.96□□□□□ -3.2
LMBR1-222ENST00000638959 DPH3Q96FX2 82 aa-4.96□□□□□ -3.2
LMBR1-222ENST00000638959 PPP3R2Q96LZ3 170 aa-4.96□□□□□ -3.2
LMBR1-222ENST00000638959 C12orf57Q99622 126 aa-4.96□□□□□ -3.2
LMBR1-222ENST00000638959 AP4S1Q9Y587 144 aa-4.96□□□□□ -3.2
LMBR1-222ENST00000638959 CEP170BQ9Y4F5 1589 aaPredicted RBP-4.96□□□□□ -3.2
LMBR1-222ENST00000638959 MRC2Q9UBG0 1479 aa-4.97□□□□□ -3.21
LMBR1-222ENST00000638959 SMIM3Q9BZL3 60 aa-4.98□□□□□ -3.21
LMBR1-222ENST00000638959 UBR3Q6ZT12 1888 aa-4.98□□□□□ -3.21
LMBR1-222ENST00000638959 TNRC6CQ9HCJ0 1690 aaKnown RBP-4.99□□□□□ -3.21
LMBR1-222ENST00000638959 TCEAL4Q96EI5 215 aa-4.99□□□□□ -3.21
LMBR1-222ENST00000638959 PDCD10Q9BUL8 212 aa-4.99□□□□□ -3.21
LMBR1-222ENST00000638959 CUL7Q14999 1698 aa-4.99□□□□□ -3.21
LMBR1-222ENST00000638959 SCGB1A1P11684 91 aa-5□□□□□ -3.21
LMBR1-222ENST00000638959 Q0VG73 95 aa-5□□□□□ -3.21
LMBR1-222ENST00000638959 COPS9Q8WXC6 57 aa-5□□□□□ -3.21
LMBR1-222ENST00000638959 VAMP8Q9BV40 100 aa-5□□□□□ -3.21
LMBR1-222ENST00000638959 SHROOM2Q13796 1616 aa-5.01□□□□□ -3.21
LMBR1-222ENST00000638959 A0A1B0GV72 72 aa-5.01□□□□□ -3.21
LMBR1-222ENST00000638959 DEFB130BP0DP73 79 aa-5.01□□□□□ -3.21
LMBR1-222ENST00000638959 DEFB130AP0DP74 79 aa-5.01□□□□□ -3.21
LMBR1-222ENST00000638959 SMCO1Q147U7 214 aa-5.01□□□□□ -3.21
LMBR1-222ENST00000638959 SERP2Q8N6R1 65 aa-5.01□□□□□ -3.21
LMBR1-222ENST00000638959 SERP1Q9Y6X1 66 aa-5.01□□□□□ -3.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms