RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 CRIP3Q6Q6R5 217 aa10.76□□□□□ -0.69
UBE3A-227ENST00000638011 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
UBE3A-227ENST00000638011 GAS8-AS1O95177 125 aa10.76□□□□□ -0.69
UBE3A-227ENST00000638011 LCA10Q71F78 164 aa10.75□□□□□ -0.69
UBE3A-227ENST00000638011 C9orf116Q5BN46 136 aaPredicted RBP10.74□□□□□ -0.69
UBE3A-227ENST00000638011 A0A096LNJ9 63 aa10.74□□□□□ -0.69
UBE3A-227ENST00000638011 PRR3P79522 188 aaKnown RBP10.74□□□□□ -0.69
UBE3A-227ENST00000638011 Q6ZQT0 140 aa10.74□□□□□ -0.69
UBE3A-227ENST00000638011 C6orf223Q8N319 242 aa10.73□□□□□ -0.69
UBE3A-227ENST00000638011 SSBP3-AS1Q7Z2R9 100 aa10.73□□□□□ -0.69
UBE3A-227ENST00000638011 MAST4O15021 2626 aa10.73□□□□□ -0.69
UBE3A-227ENST00000638011 PRR15Q8IV56 129 aa10.72□□□□□ -0.69
UBE3A-227ENST00000638011 NBEAL1Q6ZS30 2694 aa10.72□□□□□ -0.69
UBE3A-227ENST00000638011 Q8NBF4 154 aa10.71□□□□□ -0.69
UBE3A-227ENST00000638011 MDFIQ99750 246 aa10.7□□□□□ -0.7
UBE3A-227ENST00000638011 CENPEQ02224 2701 aa10.7□□□□□ -0.7
UBE3A-227ENST00000638011 ATRQ13535 2644 aa10.7□□□□□ -0.7
UBE3A-227ENST00000638011 IGLV5-45A0A087WSX0 123 aa10.7□□□□□ -0.7
UBE3A-227ENST00000638011 C1orf229Q6ZS94 237 aaPredicted RBP10.69□□□□□ -0.7
UBE3A-227ENST00000638011 LINC01600Q96MT4 127 aa10.67□□□□□ -0.7
UBE3A-227ENST00000638011 TRBV7-4A0A0J9YYF1 115 aa10.67□□□□□ -0.7
UBE3A-227ENST00000638011 CENPFP49454 3210 aa10.67□□□□□ -0.7
UBE3A-227ENST00000638011 TM2D3Q9BRN9 247 aa10.66□□□□□ -0.7
UBE3A-227ENST00000638011 FHL2Q14192 279 aa10.66□□□□□ -0.7
UBE3A-227ENST00000638011 Q9UF83 564 aa10.66□□□□□ -0.7
UBE3A-227ENST00000638011 LUZP6Q538Z0 58 aa10.65□□□□□ -0.7
UBE3A-227ENST00000638011 FAM19A4Q96LR4 140 aa10.65□□□□□ -0.7
UBE3A-227ENST00000638011 MGAM2Q2M2H8 2515 aa10.65□□□□□ -0.7
UBE3A-227ENST00000638011 IGLV5-52A0A0A0MRZ9 124 aa10.65□□□□□ -0.7
UBE3A-227ENST00000638011 FSHBP01225 129 aa10.65□□□□□ -0.7
UBE3A-227ENST00000638011 FAM229AH3BQW9 127 aa10.65□□□□□ -0.7
UBE3A-227ENST00000638011 SMCPP49901 116 aaPredicted RBP10.65□□□□□ -0.7
UBE3A-227ENST00000638011 WIPF1O43516 503 aa10.64□□□□□ -0.71
UBE3A-227ENST00000638011 LINC01556Q5JQF7 62 aa10.64□□□□□ -0.71
UBE3A-227ENST00000638011 IGLV4-60A0A075B6I1 120 aa10.64□□□□□ -0.71
UBE3A-227ENST00000638011 PLA2G1BP04054 148 aaKnown RBP10.64□□□□□ -0.71
UBE3A-227ENST00000638011 KIAA0087Q14695 138 aa10.63□□□□□ -0.71
UBE3A-227ENST00000638011 C11orf71Q6IPW1 123 aa10.63□□□□□ -0.71
UBE3A-227ENST00000638011 MIR22HGQ0VDD5 57 aa10.62□□□□□ -0.71
UBE3A-227ENST00000638011 COA5Q86WW8 74 aa10.62□□□□□ -0.71
UBE3A-227ENST00000638011 LINC00313P59037 77 aa10.62□□□□□ -0.71
UBE3A-227ENST00000638011 DEFB116Q30KQ4 102 aa10.62□□□□□ -0.71
UBE3A-227ENST00000638011 IGHV3OR16-9A0A0B4J2B5 98 aa10.61□□□□□ -0.71
UBE3A-227ENST00000638011 A8MWP4 228 aa10.59□□□□□ -0.71
UBE3A-227ENST00000638011 Q6ZRX8 168 aa10.59□□□□□ -0.71
UBE3A-227ENST00000638011 LY6G6DO95868 133 aa10.59□□□□□ -0.71
UBE3A-227ENST00000638011 LINC01006Q8NI28 216 aa10.59□□□□□ -0.71
UBE3A-227ENST00000638011 IGLV1-51P01701 117 aa10.58□□□□□ -0.72
UBE3A-227ENST00000638011 SPANXA2-OT1Q8N9U9 137 aa10.58□□□□□ -0.72
UBE3A-227ENST00000638011 A8MTW9 85 aa10.58□□□□□ -0.72
UBE3A-227ENST00000638011 DMBT1Q9UGM3 2413 aaPredicted RBP10.58□□□□□ -0.72
UBE3A-227ENST00000638011 CFAP46Q8IYW2 2715 aa10.56□□□□□ -0.72
UBE3A-227ENST00000638011 LINC00336Q6ZUF6 198 aa10.56□□□□□ -0.72
UBE3A-227ENST00000638011 ODF3L2Q3SX64 289 aa10.56□□□□□ -0.72
UBE3A-227ENST00000638011 Q8NA96 180 aa10.56□□□□□ -0.72
UBE3A-227ENST00000638011 SMCR5Q8TEV8 140 aa10.54□□□□□ -0.72
UBE3A-227ENST00000638011 C22orf24Q9Y442 160 aa10.53□□□□□ -0.72
UBE3A-227ENST00000638011 A8MUN3 132 aa10.52□□□□□ -0.72
UBE3A-227ENST00000638011 PLA2G5P39877 138 aa10.52□□□□□ -0.73
UBE3A-227ENST00000638011 STAB1Q9NY15 2570 aa10.52□□□□□ -0.73
UBE3A-227ENST00000638011 LINC00476Q8WZB0 136 aa10.52□□□□□ -0.73
UBE3A-227ENST00000638011 CDC42SE1Q9NRR8 79 aa10.51□□□□□ -0.73
UBE3A-227ENST00000638011 LYPD5Q6UWN5 251 aa10.5□□□□□ -0.73
UBE3A-227ENST00000638011 IGLV8-61A0A075B6I0 122 aa10.5□□□□□ -0.73
UBE3A-227ENST00000638011 Q6ZRU5 148 aa10.5□□□□□ -0.73
UBE3A-227ENST00000638011 H3BNG1 76 aa10.49□□□□□ -0.73
UBE3A-227ENST00000638011 KIF25-AS1Q9Y6Z4 181 aa10.49□□□□□ -0.73
UBE3A-227ENST00000638011 NOTCH1P46531 2555 aa10.48□□□□□ -0.73
UBE3A-227ENST00000638011 EPM2AB3EWF7 344 aa10.48□□□□□ -0.73
UBE3A-227ENST00000638011 H7BZZ5 65 aa10.48□□□□□ -0.73
UBE3A-227ENST00000638011 FAM218AQ96MZ4 157 aa10.48□□□□□ -0.73
UBE3A-227ENST00000638011 IGLV6-57P01721 117 aa10.47□□□□□ -0.73
UBE3A-227ENST00000638011 LINC01554Q52M75 96 aa10.47□□□□□ -0.73
UBE3A-227ENST00000638011 GVQW2A0A096LPI5 108 aaPredicted RBP10.47□□□□□ -0.73
UBE3A-227ENST00000638011 LY6G6CO95867 125 aa10.47□□□□□ -0.73
UBE3A-227ENST00000638011 Q1T7F1 81 aa10.46□□□□□ -0.73
UBE3A-227ENST00000638011 M0R2N4 97 aa10.45□□□□□ -0.74
UBE3A-227ENST00000638011 C10orf99Q6UWK7 81 aa10.44□□□□□ -0.74
UBE3A-227ENST00000638011 LINC00167Q96N53 147 aa10.42□□□□□ -0.74
UBE3A-227ENST00000638011 EDN2P20800 178 aa10.42□□□□□ -0.74
UBE3A-227ENST00000638011 MRPL34Q9BQ48 92 aaKnown RBP10.42□□□□□ -0.74
UBE3A-227ENST00000638011 RPL37AP61513 92 aaKnown RBP10.41□□□□□ -0.74
UBE3A-227ENST00000638011 Q6ZRP5 223 aa10.41□□□□□ -0.74
UBE3A-227ENST00000638011 Q6ZSN1 163 aa10.41□□□□□ -0.74
UBE3A-227ENST00000638011 C16orf90A8MZG2 172 aa10.4□□□□□ -0.74
UBE3A-227ENST00000638011 C1orf134Q5TEV5 83 aa10.4□□□□□ -0.74
UBE3A-227ENST00000638011 INAFM1C9JVW0 142 aa10.39□□□□□ -0.75
UBE3A-227ENST00000638011 SPACA4Q8TDM5 124 aa10.39□□□□□ -0.75
UBE3A-227ENST00000638011 C16orf95Q9H693 158 aa10.39□□□□□ -0.75
UBE3A-227ENST00000638011 K7EQZ3 153 aa10.37□□□□□ -0.75
UBE3A-227ENST00000638011 FLNAP21333 2647 aaKnown RBP10.37□□□□□ -0.75
UBE3A-227ENST00000638011 CHD6Q8TD26 2715 aa10.36□□□□□ -0.75
UBE3A-227ENST00000638011 C18orf65Q6ZTR6 163 aa10.36□□□□□ -0.75
UBE3A-227ENST00000638011 A0A1W2PNU3 283 aaPredicted RBP10.34□□□□□ -0.75
UBE3A-227ENST00000638011 PRO3102Q9H379 93 aa10.34□□□□□ -0.75
UBE3A-227ENST00000638011 LINC00315P59091 139 aa10.32□□□□□ -0.76
UBE3A-227ENST00000638011 ITPR3Q14573 2671 aa10.32□□□□□ -0.76
UBE3A-227ENST00000638011 A0A0A0MQY5 61 aa10.32□□□□□ -0.76
UBE3A-227ENST00000638011 C19orf84I3L1E1 186 aa10.31□□□□□ -0.76
UBE3A-227ENST00000638011 AVPP01185 164 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms