RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 C6orf226Q5I0X4 101 aa12.73□□□□□ -0.37
CLN5-219ENST00000637537 OR13C6PQ8NH95 151 aa12.73□□□□□ -0.37
CLN5-219ENST00000637537 PFN2P35080 140 aa12.72□□□□□ -0.37
CLN5-219ENST00000637537 C11orf45Q8TAV5 145 aa12.72□□□□□ -0.37
CLN5-219ENST00000637537 K7EIL1 84 aa12.72□□□□□ -0.37
CLN5-219ENST00000637537 Q6JHZ5 121 aa12.72□□□□□ -0.37
CLN5-219ENST00000637537 MIR7-3HGQ8N6C7 128 aa12.72□□□□□ -0.37
CLN5-219ENST00000637537 UPK3BQ9BT76 320 aa12.72□□□□□ -0.37
CLN5-219ENST00000637537 TMEM258P61165 79 aa12.71□□□□□ -0.37
CLN5-219ENST00000637537 CD164L2Q6UWJ8 174 aa12.71□□□□□ -0.37
CLN5-219ENST00000637537 WFDC10BQ8IUB3 73 aa12.71□□□□□ -0.37
CLN5-219ENST00000637537 TRAV13-2A0A0B4J235 113 aa12.71□□□□□ -0.37
CLN5-219ENST00000637537 LINC00158P58513 81 aa12.71□□□□□ -0.37
CLN5-219ENST00000637537 DPH3Q96FX2 82 aa12.71□□□□□ -0.37
CLN5-219ENST00000637537 OBSCN-AS1Q96MR7 158 aa12.71□□□□□ -0.37
CLN5-219ENST00000637537 SERP2Q8N6R1 65 aa12.7□□□□□ -0.38
CLN5-219ENST00000637537 MDFIQ99750 246 aa12.7□□□□□ -0.38
CLN5-219ENST00000637537 DEFB131BA0A096LNP1 70 aa12.7□□□□□ -0.38
CLN5-219ENST00000637537 DNAL4O96015 105 aa12.7□□□□□ -0.38
CLN5-219ENST00000637537 C9orf129Q5T035 196 aaKnown RBP12.69□□□□□ -0.38
CLN5-219ENST00000637537 HUWE1Q7Z6Z7 4374 aaKnown RBP12.69□□□□□ -0.38
CLN5-219ENST00000637537 ENHOQ6UWT2 76 aa12.68□□□□□ -0.38
CLN5-219ENST00000637537 IGKV3D-7A0A0C4DH55 119 aa12.67□□□□□ -0.38
CLN5-219ENST00000637537 LINC00337Q8N6G1 96 aa12.67□□□□□ -0.38
CLN5-219ENST00000637537 LINC00846Q9NV44 126 aa12.67□□□□□ -0.38
CLN5-219ENST00000637537 COL7A1Q02388 2944 aa12.67□□□□□ -0.38
CLN5-219ENST00000637537 CRPP02741 224 aa12.67□□□□□ -0.38
CLN5-219ENST00000637537 ESRGQ1W209 222 aa12.67□□□□□ -0.38
CLN5-219ENST00000637537 C14orf132Q9NPU4 83 aa12.67□□□□□ -0.38
CLN5-219ENST00000637537 H3BNG1 76 aa12.66□□□□□ -0.38
CLN5-219ENST00000637537 Q8IZM0 81 aa12.66□□□□□ -0.38
CLN5-219ENST00000637537 A0A087WYN8 130 aa12.66□□□□□ -0.38
CLN5-219ENST00000637537 IGKV2-28A0A075B6P5 120 aa12.65□□□□□ -0.38
CLN5-219ENST00000637537 IGKV2D-28P01615 120 aa12.65□□□□□ -0.38
CLN5-219ENST00000637537 LINC01561Q8N1V8 128 aa12.65□□□□□ -0.38
CLN5-219ENST00000637537 PRR34Q9NV39 138 aa12.65□□□□□ -0.38
CLN5-219ENST00000637537 KIAA0087Q14695 138 aa12.65□□□□□ -0.38
CLN5-219ENST00000637537 IBA57-AS1B1ANH7 110 aa12.64□□□□□ -0.39
CLN5-219ENST00000637537 OXTP01178 125 aa12.63□□□□□ -0.39
CLN5-219ENST00000637537 A0A087WVE0 104 aa12.63□□□□□ -0.39
CLN5-219ENST00000637537 USP17L23D6RBM5 183 aa12.63□□□□□ -0.39
CLN5-219ENST00000637537 SMIM11BQ8TCY0 68 aa12.63□□□□□ -0.39
CLN5-219ENST00000637537 TM2D3Q9BRN9 247 aa12.63□□□□□ -0.39
CLN5-219ENST00000637537 C9orf116Q5BN46 136 aaPredicted RBP12.62□□□□□ -0.39
CLN5-219ENST00000637537 H0YGX0 51 aa12.62□□□□□ -0.39
CLN5-219ENST00000637537 CCL18P55774 89 aa12.62□□□□□ -0.39
CLN5-219ENST00000637537 C6orf223Q8N319 242 aa12.62□□□□□ -0.39
CLN5-219ENST00000637537 SND1-IT1Q9HBX3 110 aa12.62□□□□□ -0.39
CLN5-219ENST00000637537 STAB2Q8WWQ8 2551 aa12.6□□□□□ -0.39
CLN5-219ENST00000637537 DSCR8Q96T75 97 aa12.6□□□□□ -0.39
CLN5-219ENST00000637537 C10orf25Q5T742 122 aa12.57□□□□□ -0.4
CLN5-219ENST00000637537 NCR3O14931 201 aa12.56□□□□□ -0.4
CLN5-219ENST00000637537 SPAG11BQ08648 103 aa12.56□□□□□ -0.4
CLN5-219ENST00000637537 LECT2O14960 151 aa12.56□□□□□ -0.4
CLN5-219ENST00000637537 Q5XG85 94 aa12.56□□□□□ -0.4
CLN5-219ENST00000637537 UNQ6190/PRO20217Q6UXQ8 127 aa12.56□□□□□ -0.4
CLN5-219ENST00000637537 LYSTQ99698 3801 aa12.54□□□□□ -0.4
CLN5-219ENST00000637537 TRAV10A0A0B4J240 114 aa12.53□□□□□ -0.4
CLN5-219ENST00000637537 CCKP06307 115 aa12.53□□□□□ -0.4
CLN5-219ENST00000637537 C4orf26Q17RF5 130 aa12.53□□□□□ -0.4
CLN5-219ENST00000637537 PRR3P79522 188 aaKnown RBP12.53□□□□□ -0.4
CLN5-219ENST00000637537 NDUFC2-KCTD14E9PQ53 114 aa12.51□□□□□ -0.41
CLN5-219ENST00000637537 SLPIP03973 132 aa12.5□□□□□ -0.41
CLN5-219ENST00000637537 HIGD2BQ4VC39 106 aa12.5□□□□□ -0.41
CLN5-219ENST00000637537 KRTAP26-1Q6PEX3 210 aa12.5□□□□□ -0.41
CLN5-219ENST00000637537 LINC01556Q5JQF7 62 aa12.49□□□□□ -0.41
CLN5-219ENST00000637537 ATP5EP2Q5VTU8 51 aa12.49□□□□□ -0.41
CLN5-219ENST00000637537 ORMDL1Q9P0S3 153 aa12.49□□□□□ -0.41
CLN5-219ENST00000637537 DNAH9Q9NYC9 4486 aa12.49□□□□□ -0.41
CLN5-219ENST00000637537 NDUFC2O95298 119 aa12.49□□□□□ -0.41
CLN5-219ENST00000637537 S100A7L2Q5SY68 101 aa12.49□□□□□ -0.41
CLN5-219ENST00000637537 LINC00588Q9Y4M8 146 aa12.48□□□□□ -0.41
CLN5-219ENST00000637537 COX17Q14061 63 aa12.48□□□□□ -0.41
CLN5-219ENST00000637537 GHRHP01286 108 aa12.47□□□□□ -0.41
CLN5-219ENST00000637537 HRCT1Q6UXD1 115 aa12.47□□□□□ -0.41
CLN5-219ENST00000637537 LINC00167Q96N53 147 aa12.47□□□□□ -0.41
CLN5-219ENST00000637537 IGKV2D-24A0A075B6R9 120 aa12.47□□□□□ -0.41
CLN5-219ENST00000637537 Q8NDZ9 215 aa12.47□□□□□ -0.41
CLN5-219ENST00000637537 C1orf43Q9BWL3 253 aa12.45□□□□□ -0.42
CLN5-219ENST00000637537 C6orf48Q9UBA6 75 aa12.44□□□□□ -0.42
CLN5-219ENST00000637537 TENM2Q9NT68 2774 aa12.44□□□□□ -0.42
CLN5-219ENST00000637537 JMJD7-PLA2G4BH0Y9G9 81 aa12.44□□□□□ -0.42
CLN5-219ENST00000637537 ZNF561-AS1K7EIQ3 104 aa12.43□□□□□ -0.42
CLN5-219ENST00000637537 DNAH10OSP0CZ25 163 aa12.43□□□□□ -0.42
CLN5-219ENST00000637537 C15orf56Q8N910 161 aa12.43□□□□□ -0.42
CLN5-219ENST00000637537 TRAV23DV6A0A075B6W5 121 aa12.42□□□□□ -0.42
CLN5-219ENST00000637537 TRBV10-3A0A0K0K1G6 114 aa12.42□□□□□ -0.42
CLN5-219ENST00000637537 FAM19A1Q7Z5A9 133 aa12.42□□□□□ -0.42
CLN5-219ENST00000637537 CSMD3Q7Z407 3707 aa12.41□□□□□ -0.42
CLN5-219ENST00000637537 EPM2AB3EWF7 344 aa12.41□□□□□ -0.42
CLN5-219ENST00000637537 CAMK2N2Q96S95 79 aa12.41□□□□□ -0.42
CLN5-219ENST00000637537 XAGE1AQ9HD64 81 aa12.4□□□□□ -0.42
CLN5-219ENST00000637537 Q6ZRU5 148 aa12.38□□□□□ -0.43
CLN5-219ENST00000637537 C20orf197Q8N268 126 aa12.38□□□□□ -0.43
CLN5-219ENST00000637537 Q8N814 137 aa12.38□□□□□ -0.43
CLN5-219ENST00000637537 FAM236DA0A1B0GTK5 79 aa12.37□□□□□ -0.43
CLN5-219ENST00000637537 TMEM256-PLSCR3K7ERE1 68 aa12.37□□□□□ -0.43
CLN5-219ENST00000637537 FAM236CP0DP71 79 aa12.37□□□□□ -0.43
CLN5-219ENST00000637537 DNHD1Q96M86 4753 aa12.37□□□□□ -0.43
CLN5-219ENST00000637537 GVQW2A0A096LPI5 108 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms