RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 FAM19A4Q96LR4 140 aa12.26□□□□□ -0.45
CACNA1A-227ENST00000636549 OBSCN-AS1Q96MR7 158 aa12.26□□□□□ -0.45
CACNA1A-227ENST00000636549 A0A1B0GUV1 79 aa12.24□□□□□ -0.45
CACNA1A-227ENST00000636549 ACACBO00763 2458 aa12.24□□□□□ -0.45
CACNA1A-227ENST00000636549 AMELXQ99217 191 aa12.24□□□□□ -0.45
CACNA1A-227ENST00000636549 URB1-AS1Q96HZ7 61 aa12.22□□□□□ -0.45
CACNA1A-227ENST00000636549 ANKHD1Q8IWZ3 2542 aaKnown RBP12.22□□□□□ -0.45
CACNA1A-227ENST00000636549 Q8NBF4 154 aa12.21□□□□□ -0.45
CACNA1A-227ENST00000636549 KIF25-AS1Q9Y6Z4 181 aa12.21□□□□□ -0.45
CACNA1A-227ENST00000636549 A0A0G2JQZ4 141 aa12.21□□□□□ -0.46
CACNA1A-227ENST00000636549 A0A1W2PNN7 141 aa12.21□□□□□ -0.46
CACNA1A-227ENST00000636549 M0R2T5 61 aa12.19□□□□□ -0.46
CACNA1A-227ENST00000636549 COL27A1Q8IZC6 1860 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-227ENST00000636549 CCDC168Q8NDH2 2452 aa12.18□□□□□ -0.46
CACNA1A-227ENST00000636549 K7EQZ3 153 aa12.17□□□□□ -0.46
CACNA1A-227ENST00000636549 IGLV5-37A0A075B6J1 123 aa12.17□□□□□ -0.46
CACNA1A-227ENST00000636549 MUC22E2RYF6 1773 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-227ENST00000636549 DOPEY1Q5JWR5 2465 aa12.17□□□□□ -0.46
CACNA1A-227ENST00000636549 ZNF575Q86XF7 245 aa12.16□□□□□ -0.46
CACNA1A-227ENST00000636549 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-227ENST00000636549 PIEZO2Q9H5I5 2752 aa12.15□□□□□ -0.46
CACNA1A-227ENST00000636549 F8WDY8 70 aa12.14□□□□□ -0.47
CACNA1A-227ENST00000636549 TTC28Q96AY4 2481 aa12.12□□□□□ -0.47
CACNA1A-227ENST00000636549 C4orf26Q17RF5 130 aa12.12□□□□□ -0.47
CACNA1A-227ENST00000636549 C11orf72Q8NBR9 251 aa12.12□□□□□ -0.47
CACNA1A-227ENST00000636549 FAM218AQ96MZ4 157 aa12.11□□□□□ -0.47
CACNA1A-227ENST00000636549 YPEL4Q96NS1 127 aa12.11□□□□□ -0.47
CACNA1A-227ENST00000636549 CNFNQ9BYD5 112 aa12.11□□□□□ -0.47
CACNA1A-227ENST00000636549 LINC00304Q8N9R0 145 aa12.1□□□□□ -0.47
CACNA1A-227ENST00000636549 BCE1O60756 84 aa12.1□□□□□ -0.47
CACNA1A-227ENST00000636549 TM2D3Q9BRN9 247 aa12.1□□□□□ -0.47
CACNA1A-227ENST00000636549 LINC01600Q96MT4 127 aa12.1□□□□□ -0.47
CACNA1A-227ENST00000636549 TRAV22A0A0B4J277 110 aa12.08□□□□□ -0.48
CACNA1A-227ENST00000636549 KRTAP10-11P60412 298 aa12.08□□□□□ -0.48
CACNA1A-227ENST00000636549 PTPRBP23467 1997 aa12.06□□□□□ -0.48
CACNA1A-227ENST00000636549 TP53AIP1Q9HCN2 124 aa12.06□□□□□ -0.48
CACNA1A-227ENST00000636549 Q6ZRX8 168 aa12.06□□□□□ -0.48
CACNA1A-227ENST00000636549 CXCL6P80162 114 aa12.05□□□□□ -0.48
CACNA1A-227ENST00000636549 CSNK1G2-AS1Q8NCQ2 148 aa12.04□□□□□ -0.48
CACNA1A-227ENST00000636549 ELOF1P60002 83 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-227ENST00000636549 LINC00310P59036 64 aa12.03□□□□□ -0.48
CACNA1A-227ENST00000636549 CRIPTQ9P021 101 aa12.03□□□□□ -0.48
CACNA1A-227ENST00000636549 CACNA1AO00555 2505 aa12.03□□□□□ -0.48
CACNA1A-227ENST00000636549 IGLV5-39A0A0G2JS06 123 aa12.02□□□□□ -0.49
CACNA1A-227ENST00000636549 C8orf87E5RJ46 101 aa12□□□□□ -0.49
CACNA1A-227ENST00000636549 NAV2Q8IVL1 2488 aa12□□□□□ -0.49
CACNA1A-227ENST00000636549 C15orf56Q8N910 161 aa12□□□□□ -0.49
CACNA1A-227ENST00000636549 A0A096LNJ9 63 aa11.99□□□□□ -0.49
CACNA1A-227ENST00000636549 Q8N1X5 172 aa11.99□□□□□ -0.49
CACNA1A-227ENST00000636549 Q8NAQ8 132 aa11.98□□□□□ -0.49
CACNA1A-227ENST00000636549 RBM12B-AS1Q9P1G2 102 aa11.98□□□□□ -0.49
CACNA1A-227ENST00000636549 IGLV1-50A0A075B6I6 118 aa11.97□□□□□ -0.49
CACNA1A-227ENST00000636549 K7EIL1 84 aa11.97□□□□□ -0.49
CACNA1A-227ENST00000636549 IGHV3OR16-9A0A0B4J2B5 98 aa11.97□□□□□ -0.49
CACNA1A-227ENST00000636549 IGF2RP11717 2491 aa11.95□□□□□ -0.5
CACNA1A-227ENST00000636549 TRBV7-4A0A0J9YYF1 115 aa11.95□□□□□ -0.5
CACNA1A-227ENST00000636549 LINC01561Q8N1V8 128 aa11.95□□□□□ -0.5
CACNA1A-227ENST00000636549 LRRK2Q5S007 2527 aa11.95□□□□□ -0.5
CACNA1A-227ENST00000636549 Q6ZQT0 140 aa11.94□□□□□ -0.5
CACNA1A-227ENST00000636549 MRPL34Q9BQ48 92 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-227ENST00000636549 MYO18BQ8IUG5 2567 aa11.93□□□□□ -0.5
CACNA1A-227ENST00000636549 IGLV5-48A0A075B6I7 105 aa11.92□□□□□ -0.5
CACNA1A-227ENST00000636549 VPREB1P12018 145 aa11.91□□□□□ -0.5
CACNA1A-227ENST00000636549 IGLV5-45A0A087WSX0 123 aa11.91□□□□□ -0.5
CACNA1A-227ENST00000636549 COA5Q86WW8 74 aa11.91□□□□□ -0.5
CACNA1A-227ENST00000636549 NCOR2Q9Y618 2525 aa11.9□□□□□ -0.5
CACNA1A-227ENST00000636549 LINC00528Q8N1L1 170 aa11.87□□□□□ -0.51
CACNA1A-227ENST00000636549 C2CD3Q4AC94 2353 aa11.86□□□□□ -0.51
CACNA1A-227ENST00000636549 A8MWP4 228 aa11.86□□□□□ -0.51
CACNA1A-227ENST00000636549 MYO9AB2RTY4 2548 aa11.84□□□□□ -0.51
CACNA1A-227ENST00000636549 GVQW2A0A096LPI5 108 aaPredicted RBP11.83□□□□□ -0.52
CACNA1A-227ENST00000636549 A8MUN3 132 aa11.83□□□□□ -0.52
CACNA1A-227ENST00000636549 COL4A2P08572 1712 aa11.82□□□□□ -0.52
CACNA1A-227ENST00000636549 IGFL1Q6UW32 110 aa11.81□□□□□ -0.52
CACNA1A-227ENST00000636549 EP400Q96L91 3159 aa11.81□□□□□ -0.52
CACNA1A-227ENST00000636549 MIR22HGQ0VDD5 57 aa11.81□□□□□ -0.52
CACNA1A-227ENST00000636549 A0A087WTM6 91 aa11.81□□□□□ -0.52
CACNA1A-227ENST00000636549 GOLGB1Q14789 3259 aaKnown RBP11.8□□□□□ -0.52
CACNA1A-227ENST00000636549 KRTAP10-3P60369 221 aa11.8□□□□□ -0.52
CACNA1A-227ENST00000636549 JMJD1CQ15652 2540 aa11.8□□□□□ -0.52
CACNA1A-227ENST00000636549 WDR87Q6ZQQ6 2873 aa11.79□□□□□ -0.52
CACNA1A-227ENST00000636549 CASC10Q5T4H9 136 aa11.78□□□□□ -0.52
CACNA1A-227ENST00000636549 Q6ZSA8 131 aa11.78□□□□□ -0.52
CACNA1A-227ENST00000636549 LOC101927531A0A1B0GV80 90 aa11.77□□□□□ -0.52
CACNA1A-227ENST00000636549 H3BNG1 76 aa11.77□□□□□ -0.53
CACNA1A-227ENST00000636549 PRO0628Q9UI54 55 aa11.77□□□□□ -0.53
CACNA1A-227ENST00000636549 PLA2G2DQ9UNK4 145 aa11.77□□□□□ -0.53
CACNA1A-227ENST00000636549 ZNF861PO60384 105 aa11.75□□□□□ -0.53
CACNA1A-227ENST00000636549 C8orf17Q9NRJ1 99 aa11.75□□□□□ -0.53
CACNA1A-227ENST00000636549 CAMK2N1Q7Z7J9 78 aa11.75□□□□□ -0.53
CACNA1A-227ENST00000636549 COX8CQ7Z4L0 72 aa11.74□□□□□ -0.53
CACNA1A-227ENST00000636549 ZFYVE26Q68DK2 2539 aa11.73□□□□□ -0.53
CACNA1A-227ENST00000636549 UQCR11O14957 56 aa11.72□□□□□ -0.53
CACNA1A-227ENST00000636549 PSORS1C2Q9UIG4 136 aa11.72□□□□□ -0.53
CACNA1A-227ENST00000636549 FN1P02751 2386 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-227ENST00000636549 LINC00336Q6ZUF6 198 aa11.71□□□□□ -0.54
CACNA1A-227ENST00000636549 TLN1Q9Y490 2541 aaKnown RBP11.71□□□□□ -0.54
CACNA1A-227ENST00000636549 SMCPP49901 116 aaPredicted RBP11.71□□□□□ -0.54
CACNA1A-227ENST00000636549 IGLV7-43P04211 117 aa11.69□□□□□ -0.54
CACNA1A-227ENST00000636549 A0A1B0GVX0 72 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms