RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 LST1O00453 97 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 ATP6V1G1O75348 118 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 CXorf1O96002 111 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 LTAP01374 205 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 APOA1P02647 267 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 SPRR1AP35321 89 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 HIST1H2BAQ96A08 127 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 WDR61Q9GZS3 305 aaKnown RBP0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 KCNQ1DNQ9H478 68 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 TMEM167BQ9NRX6 74 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 ERG28Q9UKR5 140 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 TNFSF18Q9UNG2 199 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 TRBV20OR9-2A0A075B6H5 130 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 A0A087WSZ3 146 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 TRBV6-5A0A0K0K1A5 114 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 TRBV27A0A0K0K1C4 114 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 A0A0U1RRA0 63 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 LOC389332A0A1B0GUA5 103 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 F8WEM9 126 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 ATP6V1G2O95670 118 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 MT1EP04732 61 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 IGLC6P0CF74 106 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 MT1GP13640 62 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 FAUP35544 74 aaKnown RBP0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 HINT1P49773 126 aaPredicted RBP0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 LINC00158P58513 81 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 VBP1P61758 197 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 MRPS36P82909 103 aaKnown RBP0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 ADAMTSL4-AS1Q5T5F5 129 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 LYRM7Q5U5X0 104 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 CST9LP1Q5W188 147 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 COX8CQ7Z4L0 72 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 BAGE2Q86Y30 109 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 BOD1L2Q8IYS8 172 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 MT1MQ8N339 61 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 TMEM141Q96I45 108 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 SIGMAR1Q99720 223 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 SMIM2Q9BVW6 85 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 KRTAP4-3Q9BYR4 195 aa0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 NXT2Q9NPJ8 142 aaKnown RBP0.61□□□□□ -2.31
SYNGAP1-215ENST00000636443 BORCS7-ASMTA0A0B4J1R7 106 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 IGLV5-39A0A0G2JS06 123 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 A0A1W2PRE2 83 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 C5orf52A6NGY3 159 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 A8MUN3 132 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 SMKR1H3BMG3 65 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 PPP1R2P9O14990 202 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 TCAPO15273 167 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 PPP1R17O96001 155 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 SPINK8P0C7L1 97 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 STAG3L2P0CL84 134 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 STAG3L3P0CL85 134 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 DDTP30046 118 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 RPS19P39019 145 aaKnown RBP0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 POLR2KP53803 58 aaKnown RBP0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 LINC00313P59037 77 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 LSM3P62310 102 aaKnown RBP0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 HERVK_113P63121 156 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 SEC11AP67812 179 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 SSBP1Q04837 148 aaKnown RBP0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 PMVKQ15126 192 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 S100A7L2Q5SY68 101 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 BORCS7Q96B45 105 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 DSCR8Q96T75 97 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 SMIM3Q9BZL3 60 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 RBM38Q9H0Z9 239 aaKnown RBP0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 VCXQ9H320 206 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 VCX2Q9H322 139 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 CST9LQ9H4G1 147 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 NHP2Q9NX24 153 aaKnown RBP0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 CRIPTQ9P021 101 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 CDKN2A-AS1Q9UH64 79 aa0.6□□□□□ -2.31
SYNGAP1-215ENST00000636443 IGLV4-3A0A075B6K6 122 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 TRAV23DV6A0A075B6W5 121 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 TRBV7-7A0A0K0K1E9 115 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 TEX49A0A1B0GTD5 131 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 CCDC160A6NGH7 325 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 FAM74A7A6NL05 159 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 COLCA2A8K830 154 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 SMIM1B2RUZ4 78 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 RGS5O15539 181 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 PFDN1O60925 122 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 SIX6O95475 246 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 S100A9P06702 114 aaKnown RBP0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 H2AFB2P0C5Z0 115 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 SPRR1BP22528 89 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 MRPS10P82664 201 aaKnown RBP0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 COX17Q14061 63 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 PDZD11Q5EBL8 140 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 CSAG1Q6PB30 78 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 ENKURQ8TC29 256 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 ACTR3CQ9C0K3 210 aaPredicted RBP0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 BLOC1S6Q9UL45 172 aa0.59□□□□□ -2.31
SYNGAP1-215ENST00000636443 SCO2A0A1W2PP80 73 aa0.58□□□□□ -2.32
SYNGAP1-215ENST00000636443 PPBPP02775 128 aa0.58□□□□□ -2.32
SYNGAP1-215ENST00000636443 GNGT1P63211 74 aa0.58□□□□□ -2.32
SYNGAP1-215ENST00000636443 KRTAP19-7Q3SYF9 63 aa0.58□□□□□ -2.32
SYNGAP1-215ENST00000636443 ANKRD39Q53RE8 183 aa0.58□□□□□ -2.32
SYNGAP1-215ENST00000636443 RPL7L1Q6DKI1 246 aaKnown RBP0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms