RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 IGLV7-43P04211 117 aa9.52□□□□□ -0.89
LINC00339-209ENST00000635450 SND1-IT1Q9HBX3 110 aa9.52□□□□□ -0.89
LINC00339-209ENST00000635450 ATP6V1G1O75348 118 aa9.51□□□□□ -0.89
LINC00339-209ENST00000635450 HERV-K104P63124 156 aa9.51□□□□□ -0.89
LINC00339-209ENST00000635450 MEIG1Q5JSS6 88 aa9.51□□□□□ -0.89
LINC00339-209ENST00000635450 PMCHL2Q9BQD1 86 aa9.51□□□□□ -0.89
LINC00339-209ENST00000635450 NDUFA12Q9UI09 145 aa9.51□□□□□ -0.89
LINC00339-209ENST00000635450 IGLV5-37A0A075B6J1 123 aa9.5□□□□□ -0.89
LINC00339-209ENST00000635450 MYMXA0A1B0GTQ4 84 aa9.5□□□□□ -0.89
LINC00339-209ENST00000635450 LINC00587B1AMM8 73 aa9.5□□□□□ -0.89
LINC00339-209ENST00000635450 LEPROTO15243 131 aa9.5□□□□□ -0.89
LINC00339-209ENST00000635450 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
LINC00339-209ENST00000635450 A0A0U1RRA0 63 aa9.49□□□□□ -0.89
LINC00339-209ENST00000635450 SYS1-DBNDD2H3BUS1 97 aa9.49□□□□□ -0.89
LINC00339-209ENST00000635450 KRTAP10-8P60410 259 aa9.49□□□□□ -0.89
LINC00339-209ENST00000635450 RPL24P83731 157 aaKnown RBP9.49□□□□□ -0.89
LINC00339-209ENST00000635450 DIRC1Q969H9 104 aa9.49□□□□□ -0.89
LINC00339-209ENST00000635450 LINC00167Q96N53 147 aa9.49□□□□□ -0.89
LINC00339-209ENST00000635450 COA6Q5JTJ3 125 aaKnown RBP9.48□□□□□ -0.89
LINC00339-209ENST00000635450 GAGE10A6NGK3 116 aa9.47□□□□□ -0.89
LINC00339-209ENST00000635450 RPL37AP8A6NKH3 93 aa9.47□□□□□ -0.89
LINC00339-209ENST00000635450 SMIM13P0DJ93 91 aa9.47□□□□□ -0.89
LINC00339-209ENST00000635450 J3QQQ9 107 aa9.46□□□□□ -0.9
LINC00339-209ENST00000635450 LGALS3P17931 250 aaKnown RBP9.46□□□□□ -0.9
LINC00339-209ENST00000635450 PET117Q6UWS5 81 aa9.46□□□□□ -0.9
LINC00339-209ENST00000635450 VPREB1P12018 145 aa9.45□□□□□ -0.9
LINC00339-209ENST00000635450 NMUP48645 174 aa9.45□□□□□ -0.9
LINC00339-209ENST00000635450 H0Y9J4 135 aa9.44□□□□□ -0.9
LINC00339-209ENST00000635450 TSPEAR-AS2P59090 65 aa9.44□□□□□ -0.9
LINC00339-209ENST00000635450 LINC01545Q5VT33 79 aa9.44□□□□□ -0.9
LINC00339-209ENST00000635450 MIR7-3HGQ8N6C7 128 aa9.44□□□□□ -0.9
LINC00339-209ENST00000635450 ZNF861PO60384 105 aa9.43□□□□□ -0.9
LINC00339-209ENST00000635450 BCE1O60756 84 aa9.43□□□□□ -0.9
LINC00339-209ENST00000635450 IGKV2-28A0A075B6P5 120 aa9.42□□□□□ -0.9
LINC00339-209ENST00000635450 E9PLD3 99 aa9.42□□□□□ -0.9
LINC00339-209ENST00000635450 IGKV2D-28P01615 120 aa9.42□□□□□ -0.9
LINC00339-209ENST00000635450 C3orf79P0CE67 100 aa9.42□□□□□ -0.9
LINC00339-209ENST00000635450 RPL28P46779 137 aaKnown RBP9.41□□□□□ -0.9
LINC00339-209ENST00000635450 KRTDAPP60985 99 aa9.41□□□□□ -0.9
LINC00339-209ENST00000635450 BOD1L2Q8IYS8 172 aa9.41□□□□□ -0.9
LINC00339-209ENST00000635450 IGLV1-50A0A075B6I6 118 aa9.39□□□□□ -0.91
LINC00339-209ENST00000635450 C20orf202A1L168 122 aa9.39□□□□□ -0.91
LINC00339-209ENST00000635450 UBE2AP49459 152 aa9.39□□□□□ -0.91
LINC00339-209ENST00000635450 LPAP08519 4548 aa9.39□□□□□ -0.91
LINC00339-209ENST00000635450 M0R378 163 aa9.38□□□□□ -0.91
LINC00339-209ENST00000635450 Q8NDZ9 215 aa9.38□□□□□ -0.91
LINC00339-209ENST00000635450 MIEN1Q9BRT3 115 aa9.38□□□□□ -0.91
LINC00339-209ENST00000635450 PRR26Q8N8Z3 221 aa9.37□□□□□ -0.91
LINC00339-209ENST00000635450 S100A2P29034 98 aa9.36□□□□□ -0.91
LINC00339-209ENST00000635450 DAND5Q8N907 189 aa9.36□□□□□ -0.91
LINC00339-209ENST00000635450 TMEM126AQ9H061 195 aa9.36□□□□□ -0.91
LINC00339-209ENST00000635450 IGKV2D-26A0A0A0MRZ7 120 aa9.35□□□□□ -0.91
LINC00339-209ENST00000635450 A0A0J9YXY3 114 aa9.35□□□□□ -0.91
LINC00339-209ENST00000635450 NCR3O14931 201 aa9.35□□□□□ -0.91
LINC00339-209ENST00000635450 S100A6P06703 90 aa9.35□□□□□ -0.91
LINC00339-209ENST00000635450 KRTAP1-4P0C5Y4 121 aa9.35□□□□□ -0.91
LINC00339-209ENST00000635450 AKR1D1P51857 326 aa9.35□□□□□ -0.91
LINC00339-209ENST00000635450 FAM19A1Q7Z5A9 133 aa9.35□□□□□ -0.91
LINC00339-209ENST00000635450 RNF213Q63HN8 5207 aa9.34□□□□□ -0.91
LINC00339-209ENST00000635450 TMEM238C9JI98 176 aa9.34□□□□□ -0.91
LINC00339-209ENST00000635450 LOC107984156A0A0G2JMH3 177 aa9.33□□□□□ -0.92
LINC00339-209ENST00000635450 S100A12P80511 92 aa9.33□□□□□ -0.92
LINC00339-209ENST00000635450 ARL17AQ8IVW1 177 aa9.33□□□□□ -0.92
LINC00339-209ENST00000635450 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
LINC00339-209ENST00000635450 PRYO14603 147 aa9.31□□□□□ -0.92
LINC00339-209ENST00000635450 PRLHP81277 87 aa9.31□□□□□ -0.92
LINC00339-209ENST00000635450 KRTAP13-1Q8IUC0 172 aa9.31□□□□□ -0.92
LINC00339-209ENST00000635450 HIST3H2BBQ8N257 126 aa9.31□□□□□ -0.92
LINC00339-209ENST00000635450 RPL13AP40429 203 aaKnown RBP9.3□□□□□ -0.92
LINC00339-209ENST00000635450 NPC2P61916 151 aa9.3□□□□□ -0.92
LINC00339-209ENST00000635450 TRBV10-2A0A0K0K1G8 114 aa9.29□□□□□ -0.92
LINC00339-209ENST00000635450 NDUFC2O95298 119 aa9.29□□□□□ -0.92
LINC00339-209ENST00000635450 ATOH7Q8N100 152 aa9.29□□□□□ -0.92
LINC00339-209ENST00000635450 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
LINC00339-209ENST00000635450 TRBV10-3A0A0K0K1G6 114 aa9.28□□□□□ -0.92
LINC00339-209ENST00000635450 TIMM17BO60830 172 aa9.28□□□□□ -0.92
LINC00339-209ENST00000635450 ADAMTSL4-AS1Q5T5F5 129 aa9.28□□□□□ -0.92
LINC00339-209ENST00000635450 HIST1H2BLQ99880 126 aa9.28□□□□□ -0.92
LINC00339-209ENST00000635450 DDTP30046 118 aa9.27□□□□□ -0.93
LINC00339-209ENST00000635450 S100A7L2Q5SY68 101 aa9.27□□□□□ -0.93
LINC00339-209ENST00000635450 KCNQ1DNQ9H478 68 aa9.27□□□□□ -0.93
LINC00339-209ENST00000635450 SNRPEP62304 92 aaKnown RBP9.26□□□□□ -0.93
LINC00339-209ENST00000635450 ANKRD39Q53RE8 183 aa9.26□□□□□ -0.93
LINC00339-209ENST00000635450 SOSTDC1Q6X4U4 206 aa9.26□□□□□ -0.93
LINC00339-209ENST00000635450 SCGB1D4Q6XE38 83 aa9.26□□□□□ -0.93
LINC00339-209ENST00000635450 HIGD2AQ9BW72 106 aa9.26□□□□□ -0.93
LINC00339-209ENST00000635450 TTTY13Q9BZ97 58 aa9.26□□□□□ -0.93
LINC00339-209ENST00000635450 ETDCA0A1B0GVM5 59 aa9.25□□□□□ -0.93
LINC00339-209ENST00000635450 LINC00337Q8N6G1 96 aa9.25□□□□□ -0.93
LINC00339-209ENST00000635450 CRYGAP11844 174 aa9.24□□□□□ -0.93
LINC00339-209ENST00000635450 LINC00308Q8TCZ7 52 aa9.24□□□□□ -0.93
LINC00339-209ENST00000635450 LITAFQ99732 161 aa9.24□□□□□ -0.93
LINC00339-209ENST00000635450 HSBP1L1C9JCN9 74 aa9.23□□□□□ -0.93
LINC00339-209ENST00000635450 SPRR1AP35321 89 aa9.23□□□□□ -0.93
LINC00339-209ENST00000635450 EIF4EBP3O60516 100 aaPredicted RBP9.22□□□□□ -0.93
LINC00339-209ENST00000635450 SPANXCQ9NY87 97 aa9.22□□□□□ -0.93
LINC00339-209ENST00000635450 FAM229BQ4G0N7 80 aa9.21□□□□□ -0.94
LINC00339-209ENST00000635450 COPS9Q8WXC6 57 aa9.21□□□□□ -0.94
LINC00339-209ENST00000635450 CBY1Q9Y3M2 126 aa9.21□□□□□ -0.94
LINC00339-209ENST00000635450 A0A087X002 238 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms