RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 C2orf48Q96LS8 159 aa8.16□□□□□ -1.1
COL11A1-211ENST00000635193 VPREB1P12018 145 aa8.16□□□□□ -1.1
COL11A1-211ENST00000635193 PLA2G2AP14555 144 aa8.16□□□□□ -1.1
COL11A1-211ENST00000635193 Q6ZQT0 140 aa8.16□□□□□ -1.1
COL11A1-211ENST00000635193 SPINK1P00995 79 aa8.15□□□□□ -1.1
COL11A1-211ENST00000635193 F8WDY8 70 aa8.15□□□□□ -1.1
COL11A1-211ENST00000635193 M0R2N4 97 aa8.15□□□□□ -1.11
COL11A1-211ENST00000635193 OXLD1Q5BKU9 147 aa8.15□□□□□ -1.11
COL11A1-211ENST00000635193 FLNBO75369 2602 aaKnown RBP8.14□□□□□ -1.11
COL11A1-211ENST00000635193 LOC110117498A0A087WWA1 95 aa8.14□□□□□ -1.11
COL11A1-211ENST00000635193 A0A1B0GU69 56 aa8.14□□□□□ -1.11
COL11A1-211ENST00000635193 Q6ZRU5 148 aa8.13□□□□□ -1.11
COL11A1-211ENST00000635193 Q6ZTC4 211 aa8.13□□□□□ -1.11
COL11A1-211ENST00000635193 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
COL11A1-211ENST00000635193 LYPD5Q6UWN5 251 aa8.13□□□□□ -1.11
COL11A1-211ENST00000635193 RETNLBQ9BQ08 111 aa8.13□□□□□ -1.11
COL11A1-211ENST00000635193 KRTAP10-9P60411 292 aa8.12□□□□□ -1.11
COL11A1-211ENST00000635193 MTORP42345 2549 aa8.12□□□□□ -1.11
COL11A1-211ENST00000635193 C16orf95Q9H693 158 aa8.11□□□□□ -1.11
COL11A1-211ENST00000635193 CIRBP-AS1Q8TBR5 109 aa8.1□□□□□ -1.11
COL11A1-211ENST00000635193 A0A1B0GW54 56 aa8.1□□□□□ -1.11
COL11A1-211ENST00000635193 C8orf87E5RJ46 101 aa8.1□□□□□ -1.11
COL11A1-211ENST00000635193 LINC00336Q6ZUF6 198 aa8.1□□□□□ -1.11
COL11A1-211ENST00000635193 H3BPC8 53 aa8.09□□□□□ -1.11
COL11A1-211ENST00000635193 TP53AIP1Q9HCN2 124 aa8.08□□□□□ -1.12
COL11A1-211ENST00000635193 LITAFQ99732 161 aa8.08□□□□□ -1.12
COL11A1-211ENST00000635193 SMR3AQ99954 134 aa8.07□□□□□ -1.12
COL11A1-211ENST00000635193 X6R8D5 127 aa8.07□□□□□ -1.12
COL11A1-211ENST00000635193 PTPRBP23467 1997 aa8.07□□□□□ -1.12
COL11A1-211ENST00000635193 A8MUN3 132 aa8.07□□□□□ -1.12
COL11A1-211ENST00000635193 ACYP2P14621 99 aa8.07□□□□□ -1.12
COL11A1-211ENST00000635193 ERC2-IT1O76042 136 aa8.06□□□□□ -1.12
COL11A1-211ENST00000635193 FSHBP01225 129 aa8.06□□□□□ -1.12
COL11A1-211ENST00000635193 PRLHP81277 87 aa8.06□□□□□ -1.12
COL11A1-211ENST00000635193 ELOF1P60002 83 aaKnown RBP8.06□□□□□ -1.12
COL11A1-211ENST00000635193 CD164Q04900 197 aa8.06□□□□□ -1.12
COL11A1-211ENST00000635193 ATP11AUNQ6ZP68 121 aa8.05□□□□□ -1.12
COL11A1-211ENST00000635193 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
COL11A1-211ENST00000635193 HTTP42858 3142 aa8.05□□□□□ -1.12
COL11A1-211ENST00000635193 C6orf48Q9UBA6 75 aa8.04□□□□□ -1.12
COL11A1-211ENST00000635193 Q8NBF4 154 aa8.03□□□□□ -1.12
COL11A1-211ENST00000635193 CYP4F30PQ9H0H9 118 aa8.03□□□□□ -1.12
COL11A1-211ENST00000635193 PKD1L2Q7Z442 2459 aa8.03□□□□□ -1.12
COL11A1-211ENST00000635193 KLKP1Q107X0 134 aa8.03□□□□□ -1.12
COL11A1-211ENST00000635193 TRAV22A0A0B4J277 110 aa8.02□□□□□ -1.13
COL11A1-211ENST00000635193 LINC01556Q5JQF7 62 aa8.02□□□□□ -1.13
COL11A1-211ENST00000635193 ACANP16112 2415 aa8.01□□□□□ -1.13
COL11A1-211ENST00000635193 LY6G6CO95867 125 aa8.01□□□□□ -1.13
COL11A1-211ENST00000635193 MKI67P46013 3256 aaKnown RBP8□□□□□ -1.13
COL11A1-211ENST00000635193 NUPR2A6NF83 97 aa8□□□□□ -1.13
COL11A1-211ENST00000635193 C7orf65Q6ZTY9 151 aa8□□□□□ -1.13
COL11A1-211ENST00000635193 IGKV2D-30A0A075B6S6 120 aa8□□□□□ -1.13
COL11A1-211ENST00000635193 IGKV2-30P06310 120 aa8□□□□□ -1.13
COL11A1-211ENST00000635193 RANBP2P49792 3224 aaKnown RBP7.99□□□□□ -1.13
COL11A1-211ENST00000635193 LINC00167Q96N53 147 aa7.98□□□□□ -1.13
COL11A1-211ENST00000635193 H7BZZ5 65 aa7.98□□□□□ -1.13
COL11A1-211ENST00000635193 KLK9Q2XQG4 91 aa7.97□□□□□ -1.13
COL11A1-211ENST00000635193 LINC00476Q8WZB0 136 aa7.97□□□□□ -1.13
COL11A1-211ENST00000635193 CHD7Q9P2D1 2997 aa7.96□□□□□ -1.14
COL11A1-211ENST00000635193 COA5Q86WW8 74 aa7.96□□□□□ -1.14
COL11A1-211ENST00000635193 MUC4Q99102 2169 aa7.96□□□□□ -1.14
COL11A1-211ENST00000635193 COL27A1Q8IZC6 1860 aaPredicted RBP7.96□□□□□ -1.14
COL11A1-211ENST00000635193 IGLV5-52A0A0A0MRZ9 124 aa7.95□□□□□ -1.14
COL11A1-211ENST00000635193 KTN1-AS1Q86SY8 53 aa7.95□□□□□ -1.14
COL11A1-211ENST00000635193 TRBV7-4A0A0J9YYF1 115 aa7.95□□□□□ -1.14
COL11A1-211ENST00000635193 Q6ZRX8 168 aa7.95□□□□□ -1.14
COL11A1-211ENST00000635193 C5orf42Q9H799 3197 aa7.94□□□□□ -1.14
COL11A1-211ENST00000635193 PRRC2CQ9Y520 2896 aaKnown RBP7.94□□□□□ -1.14
COL11A1-211ENST00000635193 BRCA2P51587 3418 aa7.94□□□□□ -1.14
COL11A1-211ENST00000635193 LOC101927531A0A1B0GV80 90 aa7.93□□□□□ -1.14
COL11A1-211ENST00000635193 SPINT4Q6UDR6 99 aa7.93□□□□□ -1.14
COL11A1-211ENST00000635193 WIPF1O43516 503 aa7.93□□□□□ -1.14
COL11A1-211ENST00000635193 LAMA3Q16787 3333 aa7.93□□□□□ -1.14
COL11A1-211ENST00000635193 RPL37AP61513 92 aaKnown RBP7.93□□□□□ -1.14
COL11A1-211ENST00000635193 EIF4EBP3O60516 100 aaPredicted RBP7.92□□□□□ -1.14
COL11A1-211ENST00000635193 K7EQZ3 153 aa7.92□□□□□ -1.14
COL11A1-211ENST00000635193 IGLV8-61A0A075B6I0 122 aa7.91□□□□□ -1.14
COL11A1-211ENST00000635193 MDFIQ99750 246 aa7.91□□□□□ -1.14
COL11A1-211ENST00000635193 ST20-AS1Q8NBB2 130 aa7.9□□□□□ -1.14
COL11A1-211ENST00000635193 COL4A2P08572 1712 aa7.9□□□□□ -1.15
COL11A1-211ENST00000635193 IGLV6-57P01721 117 aa7.9□□□□□ -1.15
COL11A1-211ENST00000635193 LCA10Q71F78 164 aa7.89□□□□□ -1.15
COL11A1-211ENST00000635193 GVQW2A0A096LPI5 108 aaPredicted RBP7.88□□□□□ -1.15
COL11A1-211ENST00000635193 H3BNG1 76 aa7.88□□□□□ -1.15
COL11A1-211ENST00000635193 MOBPQ13875 183 aa7.87□□□□□ -1.15
COL11A1-211ENST00000635193 UQCR11O14957 56 aa7.87□□□□□ -1.15
COL11A1-211ENST00000635193 LINC01600Q96MT4 127 aa7.87□□□□□ -1.15
COL11A1-211ENST00000635193 HECTD1Q9ULT8 2610 aa7.87□□□□□ -1.15
COL11A1-211ENST00000635193 A8MWP4 228 aa7.86□□□□□ -1.15
COL11A1-211ENST00000635193 F8P00451 2351 aa7.85□□□□□ -1.15
COL11A1-211ENST00000635193 PCSK5Q92824 1860 aa7.85□□□□□ -1.15
COL11A1-211ENST00000635193 PRR15Q8IV56 129 aa7.85□□□□□ -1.15
COL11A1-211ENST00000635193 CHD9Q3L8U1 2897 aa7.84□□□□□ -1.15
COL11A1-211ENST00000635193 Q6ZRP5 223 aa7.84□□□□□ -1.16
COL11A1-211ENST00000635193 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.16
COL11A1-211ENST00000635193 C1orf134Q5TEV5 83 aa7.83□□□□□ -1.16
COL11A1-211ENST00000635193 PHF5AQ7RTV0 110 aaKnown RBP7.82□□□□□ -1.16
COL11A1-211ENST00000635193 EPM2AB3EWF7 344 aa7.82□□□□□ -1.16
COL11A1-211ENST00000635193 Q8NAQ8 132 aa7.81□□□□□ -1.16
COL11A1-211ENST00000635193 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms