RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 SMIM1B2RUZ4 78 aa9.59□□□□□ -0.87
LINC00339-208ENST00000634934 PRSS2P07478 247 aa9.59□□□□□ -0.87
LINC00339-208ENST00000634934 COX6A2Q02221 97 aa9.59□□□□□ -0.87
LINC00339-208ENST00000634934 SFTA2Q6UW10 78 aa9.59□□□□□ -0.87
LINC00339-208ENST00000634934 Q6ZRN7 208 aaPredicted RBP9.59□□□□□ -0.87
LINC00339-208ENST00000634934 Q6Q795 121 aa9.58□□□□□ -0.88
LINC00339-208ENST00000634934 C5orf38Q86SI9 138 aa9.58□□□□□ -0.88
LINC00339-208ENST00000634934 COX7A2LO14548 114 aa9.57□□□□□ -0.88
LINC00339-208ENST00000634934 LINC00308Q8TCZ7 52 aa9.57□□□□□ -0.88
LINC00339-208ENST00000634934 IGHV3OR16-9A0A0B4J2B5 98 aa9.56□□□□□ -0.88
LINC00339-208ENST00000634934 XGP55808 180 aa9.56□□□□□ -0.88
LINC00339-208ENST00000634934 DNAH17Q9UFH2 4485 aa9.56□□□□□ -0.88
LINC00339-208ENST00000634934 LECT2O14960 151 aa9.56□□□□□ -0.88
LINC00339-208ENST00000634934 RTL8CO15255 209 aa9.56□□□□□ -0.88
LINC00339-208ENST00000634934 MALP21145 153 aa9.56□□□□□ -0.88
LINC00339-208ENST00000634934 NTN5Q8WTR8 489 aaPredicted RBP9.54□□□□□ -0.88
LINC00339-208ENST00000634934 HECTD4Q9Y4D8 3996 aa9.54□□□□□ -0.88
LINC00339-208ENST00000634934 A0A087WZ39 114 aa9.53□□□□□ -0.88
LINC00339-208ENST00000634934 USP17L23D6RBM5 183 aa9.53□□□□□ -0.88
LINC00339-208ENST00000634934 TRACP01848 142 aa9.53□□□□□ -0.88
LINC00339-208ENST00000634934 MT-ATP8P03928 68 aa9.53□□□□□ -0.88
LINC00339-208ENST00000634934 C2orf82Q6UX34 121 aa9.53□□□□□ -0.88
LINC00339-208ENST00000634934 PKD1P98161 4303 aa9.52□□□□□ -0.88
LINC00339-208ENST00000634934 H7C2G1 150 aa9.52□□□□□ -0.88
LINC00339-208ENST00000634934 CFAP161Q6P656 301 aa9.52□□□□□ -0.88
LINC00339-208ENST00000634934 LINC01561Q8N1V8 128 aa9.52□□□□□ -0.88
LINC00339-208ENST00000634934 ACYP1P07311 99 aa9.51□□□□□ -0.89
LINC00339-208ENST00000634934 CKS1BP61024 79 aa9.51□□□□□ -0.89
LINC00339-208ENST00000634934 TNP2Q05952 138 aa9.51□□□□□ -0.89
LINC00339-208ENST00000634934 LRCOL1A6NCL2 159 aa9.51□□□□□ -0.89
LINC00339-208ENST00000634934 A0A087WTM6 91 aa9.5□□□□□ -0.89
LINC00339-208ENST00000634934 HIGD2BQ4VC39 106 aa9.5□□□□□ -0.89
LINC00339-208ENST00000634934 C15orf56Q8N910 161 aa9.5□□□□□ -0.89
LINC00339-208ENST00000634934 TRAV13-2A0A0B4J235 113 aa9.49□□□□□ -0.89
LINC00339-208ENST00000634934 C14orf177Q52M58 125 aa9.48□□□□□ -0.89
LINC00339-208ENST00000634934 LINC00336Q6ZUF6 198 aa9.48□□□□□ -0.89
LINC00339-208ENST00000634934 TOMM7Q9P0U1 55 aa9.48□□□□□ -0.89
LINC00339-208ENST00000634934 TEX49A0A1B0GTD5 131 aa9.47□□□□□ -0.89
LINC00339-208ENST00000634934 ZNF561-AS1K7EIQ3 104 aa9.47□□□□□ -0.89
LINC00339-208ENST00000634934 RPL28P46779 137 aaKnown RBP9.47□□□□□ -0.89
LINC00339-208ENST00000634934 SPAG11BQ08648 103 aa9.47□□□□□ -0.89
LINC00339-208ENST00000634934 SOSTDC1Q6X4U4 206 aa9.47□□□□□ -0.89
LINC00339-208ENST00000634934 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
LINC00339-208ENST00000634934 GVQW2A0A096LPI5 108 aaPredicted RBP9.46□□□□□ -0.89
LINC00339-208ENST00000634934 SNCGO76070 127 aa9.46□□□□□ -0.89
LINC00339-208ENST00000634934 MEIG1Q5JSS6 88 aa9.46□□□□□ -0.89
LINC00339-208ENST00000634934 Q8N814 137 aa9.46□□□□□ -0.89
LINC00339-208ENST00000634934 COX7B2Q8TF08 81 aa9.46□□□□□ -0.89
LINC00339-208ENST00000634934 DNAH11Q96DT5 4516 aa9.46□□□□□ -0.9
LINC00339-208ENST00000634934 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.46□□□□□ -0.9
LINC00339-208ENST00000634934 CLEC2BQ92478 149 aa9.45□□□□□ -0.9
LINC00339-208ENST00000634934 PKHD1P08F94 4074 aa9.44□□□□□ -0.9
LINC00339-208ENST00000634934 GAGE2BQ13066 116 aa9.44□□□□□ -0.9
LINC00339-208ENST00000634934 GAGE2EQ4V326 116 aa9.44□□□□□ -0.9
LINC00339-208ENST00000634934 C6orf226Q5I0X4 101 aa9.44□□□□□ -0.9
LINC00339-208ENST00000634934 SDIM1Q6ZPB5 146 aa9.44□□□□□ -0.9
LINC00339-208ENST00000634934 IMUPQ9GZP8 106 aa9.44□□□□□ -0.9
LINC00339-208ENST00000634934 GAGE2DQ9UEU5 116 aa9.44□□□□□ -0.9
LINC00339-208ENST00000634934 Q8IZM0 81 aa9.43□□□□□ -0.9
LINC00339-208ENST00000634934 DAND5Q8N907 189 aa9.43□□□□□ -0.9
LINC00339-208ENST00000634934 TRBV7-7A0A0K0K1E9 115 aa9.42□□□□□ -0.9
LINC00339-208ENST00000634934 A0A1B0GVY2 172 aa9.42□□□□□ -0.9
LINC00339-208ENST00000634934 KIAA0087Q14695 138 aa9.42□□□□□ -0.9
LINC00339-208ENST00000634934 CAMK2N2Q96S95 79 aa9.42□□□□□ -0.9
LINC00339-208ENST00000634934 H0YGX0 51 aa9.41□□□□□ -0.9
LINC00339-208ENST00000634934 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC00339-208ENST00000634934 NPC2P61916 151 aa9.41□□□□□ -0.9
LINC00339-208ENST00000634934 BIRC6Q9NR09 4857 aa9.41□□□□□ -0.9
LINC00339-208ENST00000634934 INAFM2P0DMQ5 153 aa9.41□□□□□ -0.9
LINC00339-208ENST00000634934 C2orf48Q96LS8 159 aa9.41□□□□□ -0.9
LINC00339-208ENST00000634934 SLPIP03973 132 aa9.4□□□□□ -0.91
LINC00339-208ENST00000634934 SYCNQ0VAF6 134 aa9.4□□□□□ -0.91
LINC00339-208ENST00000634934 UNQ6190/PRO20217Q6UXQ8 127 aa9.39□□□□□ -0.91
LINC00339-208ENST00000634934 IGLV5-52A0A0A0MRZ9 124 aa9.38□□□□□ -0.91
LINC00339-208ENST00000634934 KRTAP10-2P60368 255 aa9.38□□□□□ -0.91
LINC00339-208ENST00000634934 CNBPP62633 177 aaKnown RBP9.38□□□□□ -0.91
LINC00339-208ENST00000634934 Q6ZRU5 148 aa9.38□□□□□ -0.91
LINC00339-208ENST00000634934 MIR7-3HGQ8N6C7 128 aa9.38□□□□□ -0.91
LINC00339-208ENST00000634934 SND1-IT1Q9HBX3 110 aa9.38□□□□□ -0.91
LINC00339-208ENST00000634934 IGKV2-28A0A075B6P5 120 aa9.37□□□□□ -0.91
LINC00339-208ENST00000634934 A0A1B0GX51 115 aa9.37□□□□□ -0.91
LINC00339-208ENST00000634934 F8WDY8 70 aa9.37□□□□□ -0.91
LINC00339-208ENST00000634934 IGKV2D-28P01615 120 aa9.37□□□□□ -0.91
LINC00339-208ENST00000634934 CXCL5P42830 114 aa9.37□□□□□ -0.91
LINC00339-208ENST00000634934 NDUFV3P56181 108 aaKnown RBP9.37□□□□□ -0.91
LINC00339-208ENST00000634934 C10orf25Q5T742 122 aa9.37□□□□□ -0.91
LINC00339-208ENST00000634934 ANAPC13Q9BS18 74 aa9.37□□□□□ -0.91
LINC00339-208ENST00000634934 DNAH5Q8TE73 4624 aa9.36□□□□□ -0.91
LINC00339-208ENST00000634934 COX17Q14061 63 aa9.36□□□□□ -0.91
LINC00339-208ENST00000634934 LINC00337Q8N6G1 96 aa9.36□□□□□ -0.91
LINC00339-208ENST00000634934 OBSCN-AS1Q96MR7 158 aa9.36□□□□□ -0.91
LINC00339-208ENST00000634934 DYNC1H1Q14204 4646 aaKnown RBP9.35□□□□□ -0.91
LINC00339-208ENST00000634934 BAALC-AS2P0C853 105 aa9.35□□□□□ -0.91
LINC00339-208ENST00000634934 LINC00643Q86TS7 51 aa9.35□□□□□ -0.91
LINC00339-208ENST00000634934 C6orf48Q9UBA6 75 aa9.35□□□□□ -0.91
LINC00339-208ENST00000634934 C22orf24Q9Y442 160 aa9.35□□□□□ -0.91
LINC00339-208ENST00000634934 NDUFC2O95298 119 aa9.34□□□□□ -0.91
LINC00339-208ENST00000634934 C9orf116Q5BN46 136 aaPredicted RBP9.33□□□□□ -0.92
LINC00339-208ENST00000634934 C9orf163Q8N9P6 203 aa9.33□□□□□ -0.92
LINC00339-208ENST00000634934 LINC00158P58513 81 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms