RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 HIST1H2BJP06899 126 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HIST1H2BOP23527 126 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HIST1H2BBP33778 126 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HIST1H2BDP58876 126 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 KRTAP10-8P60410 259 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HERVK_113P61574 105 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HIST1H2BCP62807 126 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HERV-K104P63124 156 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HIST2H2BEQ16778 126 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HIST1H2BHQ93079 126 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HIST1H2BNQ99877 126 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 HIST1H2BMQ99879 126 aa9.52□□□□□ -0.88
LINC00339-207ENST00000634712 MYMXA0A1B0GTQ4 84 aa9.51□□□□□ -0.89
LINC00339-207ENST00000634712 BCE1O60756 84 aa9.51□□□□□ -0.89
LINC00339-207ENST00000634712 IGKCP01834 107 aa9.51□□□□□ -0.89
LINC00339-207ENST00000634712 NDUFA12Q9UI09 145 aa9.51□□□□□ -0.89
LINC00339-207ENST00000634712 TNXBP22105 4242 aa9.51□□□□□ -0.89
LINC00339-207ENST00000634712 LEPROTO15243 131 aa9.5□□□□□ -0.89
LINC00339-207ENST00000634712 RPL28P46779 137 aaKnown RBP9.5□□□□□ -0.89
LINC00339-207ENST00000634712 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
LINC00339-207ENST00000634712 PMCHL2Q9BQD1 86 aa9.5□□□□□ -0.89
LINC00339-207ENST00000634712 SMIM13P0DJ93 91 aa9.5□□□□□ -0.89
LINC00339-207ENST00000634712 VPREB1P12018 145 aa9.5□□□□□ -0.89
LINC00339-207ENST00000634712 IGKV2-28A0A075B6P5 120 aa9.49□□□□□ -0.89
LINC00339-207ENST00000634712 IGKV2D-28P01615 120 aa9.49□□□□□ -0.89
LINC00339-207ENST00000634712 LGALS3P17931 250 aaKnown RBP9.47□□□□□ -0.89
LINC00339-207ENST00000634712 UBE2AP49459 152 aa9.47□□□□□ -0.89
LINC00339-207ENST00000634712 PRR26Q8N8Z3 221 aa9.47□□□□□ -0.89
LINC00339-207ENST00000634712 IGLV1-50A0A075B6I6 118 aa9.46□□□□□ -0.9
LINC00339-207ENST00000634712 J3QQQ9 107 aa9.46□□□□□ -0.9
LINC00339-207ENST00000634712 MIR7-3HGQ8N6C7 128 aa9.46□□□□□ -0.9
LINC00339-207ENST00000634712 SYS1-DBNDD2H3BUS1 97 aa9.45□□□□□ -0.9
LINC00339-207ENST00000634712 NMUP48645 174 aa9.44□□□□□ -0.9
LINC00339-207ENST00000634712 TSPEAR-AS2P59090 65 aa9.44□□□□□ -0.9
LINC00339-207ENST00000634712 BOD1L2Q8IYS8 172 aa9.44□□□□□ -0.9
LINC00339-207ENST00000634712 M0R378 163 aa9.43□□□□□ -0.9
LINC00339-207ENST00000634712 Q8NDZ9 215 aa9.43□□□□□ -0.9
LINC00339-207ENST00000634712 KRTAP1-4P0C5Y4 121 aa9.42□□□□□ -0.9
LINC00339-207ENST00000634712 PET117Q6UWS5 81 aa9.42□□□□□ -0.9
LINC00339-207ENST00000634712 FAM19A1Q7Z5A9 133 aa9.42□□□□□ -0.9
LINC00339-207ENST00000634712 TMEM126AQ9H061 195 aa9.42□□□□□ -0.9
LINC00339-207ENST00000634712 HMCN2Q8NDA2 5059 aa9.42□□□□□ -0.9
LINC00339-207ENST00000634712 TMEM238C9JI98 176 aa9.41□□□□□ -0.9
LINC00339-207ENST00000634712 RPL13AP40429 203 aaKnown RBP9.41□□□□□ -0.9
LINC00339-207ENST00000634712 E9PLD3 99 aa9.39□□□□□ -0.91
LINC00339-207ENST00000634712 NCR3O14931 201 aa9.39□□□□□ -0.91
LINC00339-207ENST00000634712 S100A1P23297 94 aa9.39□□□□□ -0.91
LINC00339-207ENST00000634712 COA6Q5JTJ3 125 aaKnown RBP9.39□□□□□ -0.91
LINC00339-207ENST00000634712 MIEN1Q9BRT3 115 aa9.39□□□□□ -0.91
LINC00339-207ENST00000634712 IGKV2D-26A0A0A0MRZ7 120 aa9.38□□□□□ -0.91
LINC00339-207ENST00000634712 LINC01545Q5VT33 79 aa9.38□□□□□ -0.91
LINC00339-207ENST00000634712 DAND5Q8N907 189 aa9.38□□□□□ -0.91
LINC00339-207ENST00000634712 C3orf79P0CE67 100 aa9.37□□□□□ -0.91
LINC00339-207ENST00000634712 KRTDAPP60985 99 aa9.37□□□□□ -0.91
LINC00339-207ENST00000634712 S100A12P80511 92 aa9.37□□□□□ -0.91
LINC00339-207ENST00000634712 PRLHP81277 87 aa9.37□□□□□ -0.91
LINC00339-207ENST00000634712 KRTAP13-1Q8IUC0 172 aa9.37□□□□□ -0.91
LINC00339-207ENST00000634712 CRYGAP11844 174 aa9.36□□□□□ -0.91
LINC00339-207ENST00000634712 LOC107984156A0A0G2JMH3 177 aa9.35□□□□□ -0.91
LINC00339-207ENST00000634712 A0A0J9YXY3 114 aa9.35□□□□□ -0.91
LINC00339-207ENST00000634712 C20orf202A1L168 122 aa9.35□□□□□ -0.91
LINC00339-207ENST00000634712 ARL17AQ8IVW1 177 aa9.35□□□□□ -0.91
LINC00339-207ENST00000634712 PRYO14603 147 aa9.34□□□□□ -0.91
LINC00339-207ENST00000634712 HIGD2AQ9BW72 106 aa9.33□□□□□ -0.92
LINC00339-207ENST00000634712 TRBV10-3A0A0K0K1G6 114 aa9.32□□□□□ -0.92
LINC00339-207ENST00000634712 TYMSOSQ8TAI1 123 aa9.32□□□□□ -0.92
LINC00339-207ENST00000634712 KCNQ1DNQ9H478 68 aa9.32□□□□□ -0.92
LINC00339-207ENST00000634712 ANAPC11Q9NYG5 84 aa9.32□□□□□ -0.92
LINC00339-207ENST00000634712 TRBV10-2A0A0K0K1G8 114 aa9.31□□□□□ -0.92
LINC00339-207ENST00000634712 ETDCA0A1B0GVM5 59 aa9.31□□□□□ -0.92
LINC00339-207ENST00000634712 NPC2P61916 151 aa9.31□□□□□ -0.92
LINC00339-207ENST00000634712 SPANXB1Q9NS25 103 aaPredicted RBP9.31□□□□□ -0.92
LINC00339-207ENST00000634712 A0A087X002 238 aa9.3□□□□□ -0.92
LINC00339-207ENST00000634712 ZNF815PA8K554 130 aa9.3□□□□□ -0.92
LINC00339-207ENST00000634712 NDUFC2O95298 119 aa9.3□□□□□ -0.92
LINC00339-207ENST00000634712 DDTP30046 118 aa9.3□□□□□ -0.92
LINC00339-207ENST00000634712 S100A7L2Q5SY68 101 aa9.3□□□□□ -0.92
LINC00339-207ENST00000634712 ADAMTSL4-AS1Q5T5F5 129 aa9.3□□□□□ -0.92
LINC00339-207ENST00000634712 AKR1D1P51857 326 aa9.29□□□□□ -0.92
LINC00339-207ENST00000634712 FAM229BQ4G0N7 80 aa9.29□□□□□ -0.92
LINC00339-207ENST00000634712 LINC00337Q8N6G1 96 aa9.29□□□□□ -0.92
LINC00339-207ENST00000634712 S100A2P29034 98 aa9.28□□□□□ -0.92
LINC00339-207ENST00000634712 TIMM17BO60830 172 aa9.27□□□□□ -0.93
LINC00339-207ENST00000634712 SPRR1AP35321 89 aa9.27□□□□□ -0.93
LINC00339-207ENST00000634712 S100A6P06703 90 aa9.26□□□□□ -0.93
LINC00339-207ENST00000634712 SOSTDC1Q6X4U4 206 aa9.26□□□□□ -0.93
LINC00339-207ENST00000634712 ZNF706Q9Y5V0 76 aaPredicted RBP9.26□□□□□ -0.93
LINC00339-207ENST00000634712 ATOH7Q8N100 152 aa9.25□□□□□ -0.93
LINC00339-207ENST00000634712 TTTY13Q9BZ97 58 aa9.25□□□□□ -0.93
LINC00339-207ENST00000634712 TSPAN13O95857 204 aa9.24□□□□□ -0.93
LINC00339-207ENST00000634712 SCGB1D4Q6XE38 83 aa9.24□□□□□ -0.93
LINC00339-207ENST00000634712 LINC00308Q8TCZ7 52 aa9.24□□□□□ -0.93
LINC00339-207ENST00000634712 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
LINC00339-207ENST00000634712 KRTAP13-2Q52LG2 175 aa9.24□□□□□ -0.93
LINC00339-207ENST00000634712 HIST3H2BBQ8N257 126 aa9.24□□□□□ -0.93
LINC00339-207ENST00000634712 LITAFQ99732 161 aa9.24□□□□□ -0.93
LINC00339-207ENST00000634712 SPANXCQ9NY87 97 aa9.24□□□□□ -0.93
LINC00339-207ENST00000634712 CBY1Q9Y3M2 126 aa9.24□□□□□ -0.93
LINC00339-207ENST00000634712 KRTAP4-16G5E9R7 235 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms