RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 Q9UF83 564 aa8.82□□□□□ -1
SCN8A-209ENST00000627620 IGLV5-45A0A087WSX0 123 aa8.82□□□□□ -1
SCN8A-209ENST00000627620 hDV103S1A0JD37 113 aa8.82□□□□□ -1
SCN8A-209ENST00000627620 H3BNG1 76 aa8.81□□□□□ -1
SCN8A-209ENST00000627620 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
SCN8A-209ENST00000627620 IGKV2-30P06310 120 aa8.8□□□□□ -1
SCN8A-209ENST00000627620 SMIM29Q86T20 159 aa8.8□□□□□ -1
SCN8A-209ENST00000627620 CRYGAP11844 174 aa8.8□□□□□ -1
SCN8A-209ENST00000627620 MOBPQ13875 183 aa8.8□□□□□ -1
SCN8A-209ENST00000627620 ZNF462Q96JM2 2506 aa8.8□□□□□ -1
SCN8A-209ENST00000627620 CDIP1Q9H305 208 aa8.8□□□□□ -1
SCN8A-209ENST00000627620 KRTAP24-1Q3LI83 254 aa8.79□□□□□ -1
SCN8A-209ENST00000627620 SPACA4Q8TDM5 124 aa8.79□□□□□ -1
SCN8A-209ENST00000627620 MUC4Q99102 2169 aa8.78□□□□□ -1
SCN8A-209ENST00000627620 FAM218AQ96MZ4 157 aa8.77□□□□□ -1.01
SCN8A-209ENST00000627620 ELOF1P60002 83 aaKnown RBP8.77□□□□□ -1.01
SCN8A-209ENST00000627620 PTPRBP23467 1997 aa8.76□□□□□ -1.01
SCN8A-209ENST00000627620 PHF5AQ7RTV0 110 aaKnown RBP8.76□□□□□ -1.01
SCN8A-209ENST00000627620 SPTBN4Q9H254 2564 aa8.75□□□□□ -1.01
SCN8A-209ENST00000627620 COL4A2P08572 1712 aa8.75□□□□□ -1.01
SCN8A-209ENST00000627620 MTORP42345 2549 aa8.74□□□□□ -1.01
SCN8A-209ENST00000627620 SMCPP49901 116 aaPredicted RBP8.74□□□□□ -1.01
SCN8A-209ENST00000627620 Q8NAQ8 132 aa8.74□□□□□ -1.01
SCN8A-209ENST00000627620 C7orf65Q6ZTY9 151 aa8.73□□□□□ -1.01
SCN8A-209ENST00000627620 Q6ZRX8 168 aa8.73□□□□□ -1.01
SCN8A-209ENST00000627620 CENPFP49454 3210 aa8.73□□□□□ -1.01
SCN8A-209ENST00000627620 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
SCN8A-209ENST00000627620 RTL8CO15255 209 aa8.73□□□□□ -1.01
SCN8A-209ENST00000627620 LINC00588Q9Y4M8 146 aa8.72□□□□□ -1.01
SCN8A-209ENST00000627620 TP53AIP1Q9HCN2 124 aa8.72□□□□□ -1.01
SCN8A-209ENST00000627620 LINC00476Q8WZB0 136 aa8.71□□□□□ -1.01
SCN8A-209ENST00000627620 EPM2AB3EWF7 344 aa8.71□□□□□ -1.02
SCN8A-209ENST00000627620 A0A1B0GW54 56 aa8.7□□□□□ -1.02
SCN8A-209ENST00000627620 C16orf90A8MZG2 172 aa8.7□□□□□ -1.02
SCN8A-209ENST00000627620 Q6ZQT0 140 aa8.7□□□□□ -1.02
SCN8A-209ENST00000627620 COL27A1Q8IZC6 1860 aaPredicted RBP8.69□□□□□ -1.02
SCN8A-209ENST00000627620 CHTF8P0CG12 524 aa8.69□□□□□ -1.02
SCN8A-209ENST00000627620 Q8NBF4 154 aa8.69□□□□□ -1.02
SCN8A-209ENST00000627620 ST20-AS1Q8NBB2 130 aa8.69□□□□□ -1.02
SCN8A-209ENST00000627620 PRO0461Q9UI25 63 aa8.68□□□□□ -1.02
SCN8A-209ENST00000627620 GVQW2A0A096LPI5 108 aaPredicted RBP8.68□□□□□ -1.02
SCN8A-209ENST00000627620 Q6ZRP5 223 aa8.67□□□□□ -1.02
SCN8A-209ENST00000627620 POLQO75417 2590 aa8.67□□□□□ -1.02
SCN8A-209ENST00000627620 LOC110117498A0A087WWA1 95 aa8.67□□□□□ -1.02
SCN8A-209ENST00000627620 KLK9Q2XQG4 91 aa8.66□□□□□ -1.02
SCN8A-209ENST00000627620 ACYP2P14621 99 aa8.66□□□□□ -1.02
SCN8A-209ENST00000627620 A0A1B0GU69 56 aa8.65□□□□□ -1.02
SCN8A-209ENST00000627620 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
SCN8A-209ENST00000627620 FASNP49327 2511 aaKnown RBP8.65□□□□□ -1.02
SCN8A-209ENST00000627620 BCE1O60756 84 aa8.65□□□□□ -1.02
SCN8A-209ENST00000627620 TYMSOSQ8TAI1 123 aa8.65□□□□□ -1.03
SCN8A-209ENST00000627620 LINC00313P59037 77 aa8.64□□□□□ -1.03
SCN8A-209ENST00000627620 ANKRD17O75179 2603 aaKnown RBP8.62□□□□□ -1.03
SCN8A-209ENST00000627620 DNAH10OSP0CZ25 163 aa8.62□□□□□ -1.03
SCN8A-209ENST00000627620 RPL37AP61513 92 aaKnown RBP8.62□□□□□ -1.03
SCN8A-209ENST00000627620 ACANP16112 2415 aa8.62□□□□□ -1.03
SCN8A-209ENST00000627620 LITAFQ99732 161 aa8.61□□□□□ -1.03
SCN8A-209ENST00000627620 FAM168BA1KXE4 195 aa8.6□□□□□ -1.03
SCN8A-209ENST00000627620 VPREB1P12018 145 aa8.6□□□□□ -1.03
SCN8A-209ENST00000627620 TRAV22A0A0B4J277 110 aa8.6□□□□□ -1.03
SCN8A-209ENST00000627620 H3BPC8 53 aa8.59□□□□□ -1.03
SCN8A-209ENST00000627620 SPAG11AQ6PDA7 123 aa8.59□□□□□ -1.03
SCN8A-209ENST00000627620 IGLV6-57P01721 117 aa8.59□□□□□ -1.03
SCN8A-209ENST00000627620 WWC2-AS2Q96NR7 200 aa8.58□□□□□ -1.04
SCN8A-209ENST00000627620 TM2D3Q9BRN9 247 aa8.58□□□□□ -1.04
SCN8A-209ENST00000627620 CSNK1G2-AS1Q8NCQ2 148 aa8.58□□□□□ -1.04
SCN8A-209ENST00000627620 TRBV7-4A0A0J9YYF1 115 aa8.56□□□□□ -1.04
SCN8A-209ENST00000627620 SERTAD4-AS1Q5TG53 156 aa8.56□□□□□ -1.04
SCN8A-209ENST00000627620 Q96NJ1 140 aa8.56□□□□□ -1.04
SCN8A-209ENST00000627620 IGLV1-50A0A075B6I6 118 aa8.54□□□□□ -1.04
SCN8A-209ENST00000627620 KRTAP10-11P60412 298 aa8.53□□□□□ -1.04
SCN8A-209ENST00000627620 PCSK5Q92824 1860 aa8.53□□□□□ -1.04
SCN8A-209ENST00000627620 A8MWP4 228 aa8.52□□□□□ -1.04
SCN8A-209ENST00000627620 PLA2G1BP04054 148 aaKnown RBP8.52□□□□□ -1.05
SCN8A-209ENST00000627620 PRO0628Q9UI54 55 aa8.52□□□□□ -1.05
SCN8A-209ENST00000627620 F8P00451 2351 aa8.51□□□□□ -1.05
SCN8A-209ENST00000627620 KCNQ1DNQ9H478 68 aa8.51□□□□□ -1.05
SCN8A-209ENST00000627620 ATP11AUNQ6ZP68 121 aa8.51□□□□□ -1.05
SCN8A-209ENST00000627620 K7EIL1 84 aa8.51□□□□□ -1.05
SCN8A-209ENST00000627620 K7EQZ3 153 aa8.5□□□□□ -1.05
SCN8A-209ENST00000627620 C8orf87E5RJ46 101 aa8.5□□□□□ -1.05
SCN8A-209ENST00000627620 LOC101927531A0A1B0GV80 90 aa8.5□□□□□ -1.05
SCN8A-209ENST00000627620 C4orf26Q17RF5 130 aa8.49□□□□□ -1.05
SCN8A-209ENST00000627620 IGLV8-61A0A075B6I0 122 aa8.49□□□□□ -1.05
SCN8A-209ENST00000627620 RPS28P62857 69 aaKnown RBP8.49□□□□□ -1.05
SCN8A-209ENST00000627620 MRPL34Q9BQ48 92 aaKnown RBP8.48□□□□□ -1.05
SCN8A-209ENST00000627620 LINC00528Q8N1L1 170 aa8.48□□□□□ -1.05
SCN8A-209ENST00000627620 C19orf73Q9NVV2 129 aa8.48□□□□□ -1.05
SCN8A-209ENST00000627620 PRR34Q9NV39 138 aa8.47□□□□□ -1.05
SCN8A-209ENST00000627620 A0A096LNT2 108 aa8.47□□□□□ -1.05
SCN8A-209ENST00000627620 C15orf56Q8N910 161 aa8.47□□□□□ -1.05
SCN8A-209ENST00000627620 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
SCN8A-209ENST00000627620 GIG44P09565 113 aaPredicted RBP8.46□□□□□ -1.06
SCN8A-209ENST00000627620 IGFL1Q6UW32 110 aa8.45□□□□□ -1.06
SCN8A-209ENST00000627620 KRTAP10-3P60369 221 aa8.45□□□□□ -1.06
SCN8A-209ENST00000627620 EPG5Q9HCE0 2579 aa8.44□□□□□ -1.06
SCN8A-209ENST00000627620 J3QL48 77 aa8.44□□□□□ -1.06
SCN8A-209ENST00000627620 C9orf129Q5T035 196 aaKnown RBP8.43□□□□□ -1.06
SCN8A-209ENST00000627620 DSCR10P59022 87 aa8.41□□□□□ -1.06
SCN8A-209ENST00000627620 ZNF861PO60384 105 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms