RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 TMEM254Q8TBM7 123 aa4.84□□□□□ -1.63
CHD2-208ENST00000626874 SETD2Q9BYW2 2564 aaPredicted RBP4.83□□□□□ -1.64
CHD2-208ENST00000626874 A0A087WYN8 130 aa4.83□□□□□ -1.64
CHD2-208ENST00000626874 LOC101927531A0A1B0GV80 90 aa4.83□□□□□ -1.64
CHD2-208ENST00000626874 RBM12B-AS1Q9P1G2 102 aa4.83□□□□□ -1.64
CHD2-208ENST00000626874 FASNP49327 2511 aaKnown RBP4.83□□□□□ -1.64
CHD2-208ENST00000626874 COL4A3Q01955 1670 aa4.82□□□□□ -1.64
CHD2-208ENST00000626874 SPATA3Q8NHX4 192 aa4.82□□□□□ -1.64
CHD2-208ENST00000626874 LINC00694P0DN24 101 aa4.82□□□□□ -1.64
CHD2-208ENST00000626874 C2orf91Q6ZV80 131 aa4.81□□□□□ -1.64
CHD2-208ENST00000626874 C11orf72Q8NBR9 251 aa4.81□□□□□ -1.64
CHD2-208ENST00000626874 LINC00167Q96N53 147 aa4.81□□□□□ -1.64
CHD2-208ENST00000626874 CDIP1Q9H305 208 aa4.81□□□□□ -1.64
CHD2-208ENST00000626874 PRM2P04554 102 aa4.81□□□□□ -1.64
CHD2-208ENST00000626874 FLG2Q5D862 2391 aaPredicted RBP4.81□□□□□ -1.64
CHD2-208ENST00000626874 LINC00315P59091 139 aa4.81□□□□□ -1.64
CHD2-208ENST00000626874 PRR3P79522 188 aaKnown RBP4.8□□□□□ -1.64
CHD2-208ENST00000626874 Q96NJ1 140 aa4.8□□□□□ -1.64
CHD2-208ENST00000626874 GVQW2A0A096LPI5 108 aaPredicted RBP4.79□□□□□ -1.64
CHD2-208ENST00000626874 Q6ZPA2 131 aa4.79□□□□□ -1.64
CHD2-208ENST00000626874 Q6ZRX8 168 aa4.79□□□□□ -1.64
CHD2-208ENST00000626874 USP9YO00507 2555 aaPredicted RBP4.79□□□□□ -1.64
CHD2-208ENST00000626874 DNAH10OSP0CZ25 163 aa4.79□□□□□ -1.64
CHD2-208ENST00000626874 CDSNQ15517 529 aa4.78□□□□□ -1.64
CHD2-208ENST00000626874 SPTBN4Q9H254 2564 aa4.78□□□□□ -1.64
CHD2-208ENST00000626874 PSPHP1O15172 72 aa4.78□□□□□ -1.64
CHD2-208ENST00000626874 ELOF1P60002 83 aaKnown RBP4.78□□□□□ -1.64
CHD2-208ENST00000626874 LINC00304Q8N9R0 145 aa4.78□□□□□ -1.64
CHD2-208ENST00000626874 CRIPTQ9P021 101 aa4.78□□□□□ -1.64
CHD2-208ENST00000626874 EPM2AB3EWF7 344 aa4.77□□□□□ -1.65
CHD2-208ENST00000626874 VPREB1P12018 145 aa4.77□□□□□ -1.65
CHD2-208ENST00000626874 DEFB116Q30KQ4 102 aa4.77□□□□□ -1.65
CHD2-208ENST00000626874 SSBP3-AS1Q7Z2R9 100 aa4.77□□□□□ -1.65
CHD2-208ENST00000626874 IGLV5-39A0A0G2JS06 123 aa4.77□□□□□ -1.65
CHD2-208ENST00000626874 CRIP3Q6Q6R5 217 aa4.77□□□□□ -1.65
CHD2-208ENST00000626874 IGHV3OR16-9A0A0B4J2B5 98 aa4.77□□□□□ -1.65
CHD2-208ENST00000626874 TRBV7-4A0A0J9YYF1 115 aa4.77□□□□□ -1.65
CHD2-208ENST00000626874 SOSTDC1Q6X4U4 206 aa4.76□□□□□ -1.65
CHD2-208ENST00000626874 POLQO75417 2590 aa4.76□□□□□ -1.65
CHD2-208ENST00000626874 LOC110117498A0A087WWA1 95 aa4.76□□□□□ -1.65
CHD2-208ENST00000626874 LINC00476Q8WZB0 136 aa4.76□□□□□ -1.65
CHD2-208ENST00000626874 ADAMTSL4-AS1Q5T5F5 129 aa4.75□□□□□ -1.65
CHD2-208ENST00000626874 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
CHD2-208ENST00000626874 CCDC179H3BU77 68 aa4.75□□□□□ -1.65
CHD2-208ENST00000626874 KRTAP24-1Q3LI83 254 aa4.75□□□□□ -1.65
CHD2-208ENST00000626874 Q6ZSN1 163 aa4.74□□□□□ -1.65
CHD2-208ENST00000626874 A8MWP4 228 aa4.74□□□□□ -1.65
CHD2-208ENST00000626874 PHF5AQ7RTV0 110 aaKnown RBP4.74□□□□□ -1.65
CHD2-208ENST00000626874 SMIM29Q86T20 159 aa4.74□□□□□ -1.65
CHD2-208ENST00000626874 SERTAD4-AS1Q5TG53 156 aa4.74□□□□□ -1.65
CHD2-208ENST00000626874 LINC00588Q9Y4M8 146 aa4.73□□□□□ -1.65
CHD2-208ENST00000626874 IGLV5-45A0A087WSX0 123 aa4.73□□□□□ -1.65
CHD2-208ENST00000626874 ST20-AS1Q8NBB2 130 aa4.73□□□□□ -1.65
CHD2-208ENST00000626874 PCSK5Q92824 1860 aa4.73□□□□□ -1.65
CHD2-208ENST00000626874 MRPL34Q9BQ48 92 aaKnown RBP4.72□□□□□ -1.65
CHD2-208ENST00000626874 C9orf163Q8N9P6 203 aa4.72□□□□□ -1.65
CHD2-208ENST00000626874 LINC01546A6NGU7 62 aa4.72□□□□□ -1.65
CHD2-208ENST00000626874 Q8NAQ8 132 aa4.72□□□□□ -1.65
CHD2-208ENST00000626874 UQCR11O14957 56 aa4.72□□□□□ -1.65
CHD2-208ENST00000626874 TSPEAR-AS2P59090 65 aa4.72□□□□□ -1.65
CHD2-208ENST00000626874 LINC00846Q9NV44 126 aa4.72□□□□□ -1.65
CHD2-208ENST00000626874 GAS8-AS1O95177 125 aa4.71□□□□□ -1.66
CHD2-208ENST00000626874 COL4A2P08572 1712 aa4.71□□□□□ -1.66
CHD2-208ENST00000626874 ZNF861PO60384 105 aa4.71□□□□□ -1.66
CHD2-208ENST00000626874 A0A087WVE0 104 aa4.7□□□□□ -1.66
CHD2-208ENST00000626874 CHTF8P0CG12 524 aa4.7□□□□□ -1.66
CHD2-208ENST00000626874 WDR87Q6ZQQ6 2873 aa4.7□□□□□ -1.66
CHD2-208ENST00000626874 A8MTW9 85 aa4.7□□□□□ -1.66
CHD2-208ENST00000626874 FAM19A4Q96LR4 140 aa4.7□□□□□ -1.66
CHD2-208ENST00000626874 CYP4F30PQ9H0H9 118 aa4.7□□□□□ -1.66
CHD2-208ENST00000626874 IGLV5-37A0A075B6J1 123 aa4.69□□□□□ -1.66
CHD2-208ENST00000626874 A0A1W2PPR1 153 aa4.69□□□□□ -1.66
CHD2-208ENST00000626874 C10orf142B7Z368 130 aa4.69□□□□□ -1.66
CHD2-208ENST00000626874 ERC2-IT1O76042 136 aa4.69□□□□□ -1.66
CHD2-208ENST00000626874 LINC01600Q96MT4 127 aa4.69□□□□□ -1.66
CHD2-208ENST00000626874 USP24Q9UPU5 2620 aa4.68□□□□□ -1.66
CHD2-208ENST00000626874 Q6ZQT0 140 aa4.68□□□□□ -1.66
CHD2-208ENST00000626874 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
CHD2-208ENST00000626874 APLNQ9ULZ1 77 aa4.66□□□□□ -1.66
CHD2-208ENST00000626874 RPS28P62857 69 aaKnown RBP4.66□□□□□ -1.66
CHD2-208ENST00000626874 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
CHD2-208ENST00000626874 IGLV6-57P01721 117 aa4.66□□□□□ -1.66
CHD2-208ENST00000626874 PLA2G2DQ9UNK4 145 aa4.65□□□□□ -1.66
CHD2-208ENST00000626874 LINC00483Q53H64 154 aa4.65□□□□□ -1.66
CHD2-208ENST00000626874 KCNQ1DNQ9H478 68 aa4.65□□□□□ -1.67
CHD2-208ENST00000626874 PSORS1C2Q9UIG4 136 aa4.64□□□□□ -1.67
CHD2-208ENST00000626874 A0A1B0GVX0 72 aa4.64□□□□□ -1.67
CHD2-208ENST00000626874 A0A087WTM6 91 aa4.64□□□□□ -1.67
CHD2-208ENST00000626874 HRES1P13985 223 aa4.63□□□□□ -1.67
CHD2-208ENST00000626874 IGLV1-50A0A075B6I6 118 aa4.63□□□□□ -1.67
CHD2-208ENST00000626874 Q9UF83 564 aa4.63□□□□□ -1.67
CHD2-208ENST00000626874 IGLV8-61A0A075B6I0 122 aa4.63□□□□□ -1.67
CHD2-208ENST00000626874 TLX1NBP0CAT3 122 aa4.63□□□□□ -1.67
CHD2-208ENST00000626874 OBSCN-AS1Q96MR7 158 aa4.63□□□□□ -1.67
CHD2-208ENST00000626874 Q6ZSA8 131 aa4.62□□□□□ -1.67
CHD2-208ENST00000626874 CEP295Q9C0D2 2601 aa4.62□□□□□ -1.67
CHD2-208ENST00000626874 K7EIL1 84 aa4.62□□□□□ -1.67
CHD2-208ENST00000626874 IGLV7-43P04211 117 aa4.62□□□□□ -1.67
CHD2-208ENST00000626874 URB1-AS1Q96HZ7 61 aa4.62□□□□□ -1.67
CHD2-208ENST00000626874 CDC42SE1Q9NRR8 79 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms