RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ATP6V1G1O75348 118 aa13.41□□□□□ -0.26
SF1-220ENST00000626028 DPM2O94777 84 aa13.4□□□□□ -0.26
SF1-220ENST00000626028 FABP4P15090 132 aa13.4□□□□□ -0.26
SF1-220ENST00000626028 PLEKHB2Q96CS7 222 aa13.4□□□□□ -0.26
SF1-220ENST00000626028 NDUFA12Q9UI09 145 aa13.4□□□□□ -0.26
SF1-220ENST00000626028 MAP1LC3CQ9BXW4 147 aa13.39□□□□□ -0.27
SF1-220ENST00000626028 IGKV2-28A0A075B6P5 120 aa13.38□□□□□ -0.27
SF1-220ENST00000626028 LEPROTO15243 131 aa13.38□□□□□ -0.27
SF1-220ENST00000626028 IGKV2D-28P01615 120 aa13.38□□□□□ -0.27
SF1-220ENST00000626028 HERVK_113P61574 105 aa13.38□□□□□ -0.27
SF1-220ENST00000626028 MEIG1Q5JSS6 88 aa13.38□□□□□ -0.27
SF1-220ENST00000626028 KRTAP13-1Q8IUC0 172 aa13.38□□□□□ -0.27
SF1-220ENST00000626028 HIST1H2BKO60814 126 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 IGKCP01834 107 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 HIST1H2BJP06899 126 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 HIST1H2BOP23527 126 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 HIST1H2BBP33778 126 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 UBE2AP49459 152 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 HIST1H2BDP58876 126 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 HIST1H2BCP62807 126 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 HIST2H2BEQ16778 126 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.37□□□□□ -0.27
SF1-220ENST00000626028 HIST1H2BHQ93079 126 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 HIST1H2BNQ99877 126 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 HIST1H2BMQ99879 126 aa13.37□□□□□ -0.27
SF1-220ENST00000626028 SMIM13P0DJ93 91 aa13.36□□□□□ -0.27
SF1-220ENST00000626028 NMUP48645 174 aa13.36□□□□□ -0.27
SF1-220ENST00000626028 SCO1O75880 301 aa13.35□□□□□ -0.27
SF1-220ENST00000626028 M0R378 163 aa13.34□□□□□ -0.27
SF1-220ENST00000626028 MIR7-3HGQ8N6C7 128 aa13.34□□□□□ -0.27
SF1-220ENST00000626028 Q8NDZ9 215 aa13.34□□□□□ -0.27
SF1-220ENST00000626028 TMEM126AQ9H061 195 aa13.34□□□□□ -0.27
SF1-220ENST00000626028 IGKV2D-26A0A0A0MRZ7 120 aa13.33□□□□□ -0.28
SF1-220ENST00000626028 A0A0U1RRA0 63 aa13.33□□□□□ -0.28
SF1-220ENST00000626028 J3QQQ9 107 aa13.33□□□□□ -0.28
SF1-220ENST00000626028 LOC107984156A0A0G2JMH3 177 aa13.31□□□□□ -0.28
SF1-220ENST00000626028 TSPEAR-AS2P59090 65 aa13.31□□□□□ -0.28
SF1-220ENST00000626028 ARL17AQ8IVW1 177 aa13.31□□□□□ -0.28
SF1-220ENST00000626028 BOD1L2Q8IYS8 172 aa13.3□□□□□ -0.28
SF1-220ENST00000626028 SYS1-DBNDD2H3BUS1 97 aa13.29□□□□□ -0.28
SF1-220ENST00000626028 CRYGAP11844 174 aa13.29□□□□□ -0.28
SF1-220ENST00000626028 LGALS3P17931 250 aaKnown RBP13.29□□□□□ -0.28
SF1-220ENST00000626028 PMCHL2Q9BQD1 86 aa13.29□□□□□ -0.28
SF1-220ENST00000626028 TMEM238C9JI98 176 aa13.28□□□□□ -0.28
SF1-220ENST00000626028 FAM19A1Q7Z5A9 133 aa13.28□□□□□ -0.28
SF1-220ENST00000626028 FAM229BQ4G0N7 80 aa13.27□□□□□ -0.29
SF1-220ENST00000626028 COA6Q5JTJ3 125 aaKnown RBP13.27□□□□□ -0.29
SF1-220ENST00000626028 E9PLD3 99 aa13.26□□□□□ -0.29
SF1-220ENST00000626028 PRYO14603 147 aa13.25□□□□□ -0.29
SF1-220ENST00000626028 PRLHP81277 87 aa13.25□□□□□ -0.29
SF1-220ENST00000626028 LINC01545Q5VT33 79 aa13.24□□□□□ -0.29
SF1-220ENST00000626028 PET117Q6UWS5 81 aa13.24□□□□□ -0.29
SF1-220ENST00000626028 KCNQ1DNQ9H478 68 aa13.24□□□□□ -0.29
SF1-220ENST00000626028 A0A087X002 238 aa13.22□□□□□ -0.29
SF1-220ENST00000626028 TRBV10-2A0A0K0K1G8 114 aa13.22□□□□□ -0.29
SF1-220ENST00000626028 S100A12P80511 92 aa13.22□□□□□ -0.29
SF1-220ENST00000626028 MIEN1Q9BRT3 115 aa13.22□□□□□ -0.29
SF1-220ENST00000626028 UBR4Q5T4S7 5183 aa13.21□□□□□ -0.29
SF1-220ENST00000626028 LINC00337Q8N6G1 96 aa13.21□□□□□ -0.29
SF1-220ENST00000626028 NDUFC2O95298 119 aa13.2□□□□□ -0.3
SF1-220ENST00000626028 SPRR1AP35321 89 aa13.2□□□□□ -0.3
SF1-220ENST00000626028 TYMSOSQ8TAI1 123 aa13.2□□□□□ -0.3
SF1-220ENST00000626028 NCR3O14931 201 aa13.19□□□□□ -0.3
SF1-220ENST00000626028 DAND5Q8N907 189 aa13.18□□□□□ -0.3
SF1-220ENST00000626028 SPANXB1Q9NS25 103 aaPredicted RBP13.18□□□□□ -0.3
SF1-220ENST00000626028 A0A0J9YXY3 114 aa13.17□□□□□ -0.3
SF1-220ENST00000626028 LRP2P98164 4655 aa13.15□□□□□ -0.3
SF1-220ENST00000626028 TRBV10-3A0A0K0K1G6 114 aa13.15□□□□□ -0.3
SF1-220ENST00000626028 C3orf79P0CE67 100 aa13.15□□□□□ -0.3
SF1-220ENST00000626028 CTAG1AP78358 180 aa13.15□□□□□ -0.3
SF1-220ENST00000626028 HIGD2AQ9BW72 106 aa13.15□□□□□ -0.3
SF1-220ENST00000626028 ZNF706Q9Y5V0 76 aaPredicted RBP13.15□□□□□ -0.3
SF1-220ENST00000626028 KRTAP4-16G5E9R7 235 aaPredicted RBP13.14□□□□□ -0.31
SF1-220ENST00000626028 ANAPC11Q9NYG5 84 aa13.14□□□□□ -0.31
SF1-220ENST00000626028 ETDCA0A1B0GVM5 59 aa13.13□□□□□ -0.31
SF1-220ENST00000626028 TIMM17BO60830 172 aa13.13□□□□□ -0.31
SF1-220ENST00000626028 AKR1D1P51857 326 aa13.13□□□□□ -0.31
SF1-220ENST00000626028 KRTAP13-2Q52LG2 175 aa13.13□□□□□ -0.31
SF1-220ENST00000626028 DDTP30046 118 aa13.12□□□□□ -0.31
SF1-220ENST00000626028 C20orf202A1L168 122 aa13.11□□□□□ -0.31
SF1-220ENST00000626028 S100A1P23297 94 aa13.1□□□□□ -0.31
SF1-220ENST00000626028 ADAMTSL4-AS1Q5T5F5 129 aa13.1□□□□□ -0.31
SF1-220ENST00000626028 CBY1Q9Y3M2 126 aa13.1□□□□□ -0.31
SF1-220ENST00000626028 IGLV6-57P01721 117 aa13.09□□□□□ -0.31
SF1-220ENST00000626028 KRTDAPP60985 99 aa13.09□□□□□ -0.31
SF1-220ENST00000626028 S100A7L2Q5SY68 101 aa13.09□□□□□ -0.31
SF1-220ENST00000626028 SPRR4Q96PI1 79 aa13.09□□□□□ -0.31
SF1-220ENST00000626028 SOSTDC1Q6X4U4 206 aa13.07□□□□□ -0.32
SF1-220ENST00000626028 LITAFQ99732 161 aa13.07□□□□□ -0.32
SF1-220ENST00000626028 ZNF815PA8K554 130 aa13.06□□□□□ -0.32
SF1-220ENST00000626028 LINC00304Q8N9R0 145 aa13.06□□□□□ -0.32
SF1-220ENST00000626028 B5MCH6 92 aa13.05□□□□□ -0.32
SF1-220ENST00000626028 SPANXCQ9NY87 97 aa13.05□□□□□ -0.32
SF1-220ENST00000626028 SMCR5Q8TEV8 140 aa13.04□□□□□ -0.32
SF1-220ENST00000626028 TSPAN13O95857 204 aa13.03□□□□□ -0.32
SF1-220ENST00000626028 Q6ZRX8 168 aa13.03□□□□□ -0.32
SF1-220ENST00000626028 LINC00308Q8TCZ7 52 aa13.03□□□□□ -0.32
SF1-220ENST00000626028 TRAV23DV6A0A075B6W5 121 aa13.02□□□□□ -0.33
SF1-220ENST00000626028 EIF4EBP3O60516 100 aaPredicted RBP13.02□□□□□ -0.33
SF1-220ENST00000626028 JOSD1Q15040 202 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms