RNA–Protein interactions for RNA: ENST00000624811.1

USH1C-211, Transcript of USH1 protein network component harmonin, humanhuman

Gene USH1C, Length 1,194 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-211ENST00000624811 TP73-AS1Q9UF72 201 aa8.15□□□□□ -1.1
USH1C-211ENST00000624811 RPL28P46779 137 aaKnown RBP8.14□□□□□ -1.11
USH1C-211ENST00000624811 IGLV5-45A0A087WSX0 123 aa8.13□□□□□ -1.11
USH1C-211ENST00000624811 A0A087X002 238 aa8.13□□□□□ -1.11
USH1C-211ENST00000624811 LINC01546A6NGU7 62 aa8.13□□□□□ -1.11
USH1C-211ENST00000624811 FABP4P15090 132 aa8.12□□□□□ -1.11
USH1C-211ENST00000624811 PMVKQ15126 192 aa8.12□□□□□ -1.11
USH1C-211ENST00000624811 FAM19A2Q8N3H0 131 aa8.12□□□□□ -1.11
USH1C-211ENST00000624811 HIST1H2BLQ99880 126 aa8.12□□□□□ -1.11
USH1C-211ENST00000624811 ANAPC11Q9NYG5 84 aa8.12□□□□□ -1.11
USH1C-211ENST00000624811 PMCHL1Q16048 86 aa8.11□□□□□ -1.11
USH1C-211ENST00000624811 NKAPP1Q8N9T2 125 aa8.11□□□□□ -1.11
USH1C-211ENST00000624811 PFN2P35080 140 aa8.1□□□□□ -1.11
USH1C-211ENST00000624811 IGKV2-28A0A075B6P5 120 aa8.09□□□□□ -1.11
USH1C-211ENST00000624811 LINC01549A6NIU2 74 aa8.09□□□□□ -1.11
USH1C-211ENST00000624811 H3BRM9 83 aa8.09□□□□□ -1.11
USH1C-211ENST00000624811 ATP5LO75964 103 aa8.09□□□□□ -1.11
USH1C-211ENST00000624811 IGKV2D-28P01615 120 aa8.09□□□□□ -1.11
USH1C-211ENST00000624811 HBDP02042 147 aa8.09□□□□□ -1.11
USH1C-211ENST00000624811 CRYGAP11844 174 aa8.09□□□□□ -1.11
USH1C-211ENST00000624811 UBE2AP49459 152 aa8.09□□□□□ -1.11
USH1C-211ENST00000624811 TYMSOSQ8TAI1 123 aa8.09□□□□□ -1.11
USH1C-211ENST00000624811 IGLV5-37A0A075B6J1 123 aa8.08□□□□□ -1.12
USH1C-211ENST00000624811 A0A096LNJ9 63 aa8.08□□□□□ -1.12
USH1C-211ENST00000624811 AKR1D1P51857 326 aa8.08□□□□□ -1.12
USH1C-211ENST00000624811 LEPROTL1O95214 131 aa8.07□□□□□ -1.12
USH1C-211ENST00000624811 IGLC3P0DOY3 106 aa8.07□□□□□ -1.12
USH1C-211ENST00000624811 ZNF22P17026 224 aaPredicted RBP8.06□□□□□ -1.12
USH1C-211ENST00000624811 ZNF625Q96I27 306 aaPredicted RBP8.06□□□□□ -1.12
USH1C-211ENST00000624811 HSPB8Q9UJY1 196 aa8.06□□□□□ -1.12
USH1C-211ENST00000624811 MUC2Q02817 5179 aa8.05□□□□□ -1.12
USH1C-211ENST00000624811 PRLHP81277 87 aa8.05□□□□□ -1.12
USH1C-211ENST00000624811 KRTAP13-2Q52LG2 175 aa8.05□□□□□ -1.12
USH1C-211ENST00000624811 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
USH1C-211ENST00000624811 IGLV5-39A0A0G2JS06 123 aa8.04□□□□□ -1.12
USH1C-211ENST00000624811 TMEM238C9JI98 176 aa8.04□□□□□ -1.12
USH1C-211ENST00000624811 SND1-IT1Q9HBX3 110 aa8.04□□□□□ -1.12
USH1C-211ENST00000624811 ERG28Q9UKR5 140 aa8.04□□□□□ -1.12
USH1C-211ENST00000624811 C3orf79P0CE67 100 aa8.03□□□□□ -1.12
USH1C-211ENST00000624811 VPREB1P12018 145 aa8.03□□□□□ -1.12
USH1C-211ENST00000624811 KRTDAPP60985 99 aa8.03□□□□□ -1.12
USH1C-211ENST00000624811 FAM19A1Q7Z5A9 133 aa8.03□□□□□ -1.12
USH1C-211ENST00000624811 RETNLBQ9BQ08 111 aa8.03□□□□□ -1.12
USH1C-211ENST00000624811 Q8NDZ9 215 aa8.02□□□□□ -1.13
USH1C-211ENST00000624811 IFI27L1Q96BM0 104 aa8.02□□□□□ -1.13
USH1C-211ENST00000624811 MAP1LC3CQ9BXW4 147 aa8.02□□□□□ -1.13
USH1C-211ENST00000624811 C11orf86A6NJI1 115 aa8.01□□□□□ -1.13
USH1C-211ENST00000624811 TMEM170BQ5T4T1 132 aa8.01□□□□□ -1.13
USH1C-211ENST00000624811 TMEM126AQ9H061 195 aa8.01□□□□□ -1.13
USH1C-211ENST00000624811 SYS1-DBNDD2H3BUS1 97 aa8□□□□□ -1.13
USH1C-211ENST00000624811 JOSD1Q15040 202 aaPredicted RBP8□□□□□ -1.13
USH1C-211ENST00000624811 IGKV2D-26A0A0A0MRZ7 120 aa7.99□□□□□ -1.13
USH1C-211ENST00000624811 A0A0U1RRA0 63 aa7.99□□□□□ -1.13
USH1C-211ENST00000624811 RPL24P83731 157 aaKnown RBP7.99□□□□□ -1.13
USH1C-211ENST00000624811 FAM229BQ4G0N7 80 aa7.99□□□□□ -1.13
USH1C-211ENST00000624811 PYY3Q5JQD4 70 aa7.99□□□□□ -1.13
USH1C-211ENST00000624811 PET117Q6UWS5 81 aa7.99□□□□□ -1.13
USH1C-211ENST00000624811 LINC00304Q8N9R0 145 aa7.99□□□□□ -1.13
USH1C-211ENST00000624811 H0Y8G0 127 aa7.98□□□□□ -1.13
USH1C-211ENST00000624811 M0R378 163 aa7.98□□□□□ -1.13
USH1C-211ENST00000624811 SCGB1D1O95968 90 aa7.98□□□□□ -1.13
USH1C-211ENST00000624811 SMIM6P0DI80 62 aa7.97□□□□□ -1.13
USH1C-211ENST00000624811 LINC00158P58513 81 aa7.97□□□□□ -1.13
USH1C-211ENST00000624811 COX17Q14061 63 aa7.97□□□□□ -1.13
USH1C-211ENST00000624811 CHTOPQ9Y3Y2 248 aaKnown RBP7.97□□□□□ -1.13
USH1C-211ENST00000624811 C20orf202A1L168 122 aa7.96□□□□□ -1.14
USH1C-211ENST00000624811 HIGD2AQ9BW72 106 aa7.96□□□□□ -1.14
USH1C-211ENST00000624811 LINC01545Q5VT33 79 aa7.95□□□□□ -1.14
USH1C-211ENST00000624811 C3orf22Q8N5N4 141 aa7.95□□□□□ -1.14
USH1C-211ENST00000624811 TRAV12-1A0A0B4J245 112 aa7.94□□□□□ -1.14
USH1C-211ENST00000624811 PLEKHB2Q96CS7 222 aa7.94□□□□□ -1.14
USH1C-211ENST00000624811 TMEM223A0PJW6 202 aa7.93□□□□□ -1.14
USH1C-211ENST00000624811 SFTA2Q6UW10 78 aa7.93□□□□□ -1.14
USH1C-211ENST00000624811 LINC00518Q8N0U6 118 aa7.93□□□□□ -1.14
USH1C-211ENST00000624811 C12orf57Q99622 126 aa7.93□□□□□ -1.14
USH1C-211ENST00000624811 PMCHL2Q9BQD1 86 aa7.93□□□□□ -1.14
USH1C-211ENST00000624811 A0A0U1RQV1 116 aa7.92□□□□□ -1.14
USH1C-211ENST00000624811 SMIM13P0DJ93 91 aa7.92□□□□□ -1.14
USH1C-211ENST00000624811 IGLV7-46A0A075B6I9 117 aa7.91□□□□□ -1.14
USH1C-211ENST00000624811 NCR3O14931 201 aa7.91□□□□□ -1.14
USH1C-211ENST00000624811 MEIG1Q5JSS6 88 aa7.91□□□□□ -1.14
USH1C-211ENST00000624811 ATOH7Q8N100 152 aa7.91□□□□□ -1.14
USH1C-211ENST00000624811 CDIP1Q9H305 208 aa7.91□□□□□ -1.14
USH1C-211ENST00000624811 DPM2O94777 84 aa7.9□□□□□ -1.14
USH1C-211ENST00000624811 FAT4Q6V0I7 4981 aa7.89□□□□□ -1.15
USH1C-211ENST00000624811 IGKCP01834 107 aa7.89□□□□□ -1.15
USH1C-211ENST00000624811 S100A12P80511 92 aa7.89□□□□□ -1.15
USH1C-211ENST00000624811 BOD1L2Q8IYS8 172 aa7.89□□□□□ -1.15
USH1C-211ENST00000624811 SPRR4Q96PI1 79 aa7.89□□□□□ -1.15
USH1C-211ENST00000624811 PLNP26678 52 aa7.88□□□□□ -1.15
USH1C-211ENST00000624811 MIR7-3HGQ8N6C7 128 aa7.88□□□□□ -1.15
USH1C-211ENST00000624811 VAMP8Q9BV40 100 aa7.88□□□□□ -1.15
USH1C-211ENST00000624811 PPDPFQ9H3Y8 114 aa7.87□□□□□ -1.15
USH1C-211ENST00000624811 MUC17Q685J3 4493 aa7.87□□□□□ -1.15
USH1C-211ENST00000624811 HSBP1L1C9JCN9 74 aa7.86□□□□□ -1.15
USH1C-211ENST00000624811 PRYO14603 147 aa7.86□□□□□ -1.15
USH1C-211ENST00000624811 TPRXLQ17RH7 258 aa7.86□□□□□ -1.15
USH1C-211ENST00000624811 DAND5Q8N907 189 aa7.86□□□□□ -1.15
USH1C-211ENST00000624811 PAM16Q9Y3D7 125 aa7.86□□□□□ -1.15
USH1C-211ENST00000624811 ZNF706Q9Y5V0 76 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms