RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y FAM229BQ4G0N7 80 aa9.39□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y IGKV2-28A0A075B6P5 120 aa9.38□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y IGKV2D-28P01615 120 aa9.38□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y PFN2P35080 140 aa9.38□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y KRTAP13-1Q8IUC0 172 aa9.38□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y SCO1O75880 301 aa9.37□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y PMCHL1Q16048 86 aa9.37□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y TPRXLQ17RH7 258 aa9.37□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y SNAPINO95295 136 aa9.36□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y APOC3P02656 99 aa9.36□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y PRLHP81277 87 aa9.36□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y NDUFA5Q16718 116 aa9.36□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y BAGE3Q86Y29 109 aa9.36□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y ERG28Q9UKR5 140 aa9.36□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y COX17Q14061 63 aa9.35□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y SFTA2Q6UW10 78 aa9.35□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y SVBPQ8N300 66 aa9.35□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y C11orf86A6NJI1 115 aa9.34□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y TMEM170BQ5T4T1 132 aa9.34□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y FAM19A1Q7Z5A9 133 aa9.34□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y SND1-IT1Q9HBX3 110 aa9.34□□□□□ -0.91
CD99-211ENST00000623253_PAR_Y RPL24P83731 157 aaKnown RBP9.33□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y PPDPFQ9H3Y8 114 aa9.33□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y MUC17Q685J3 4493 aa9.33□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y H3BS24 57 aa9.32□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y VPREB1P12018 145 aa9.32□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y ZNF625Q96I27 306 aaPredicted RBP9.32□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y TMEM238C9JI98 176 aa9.3□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y CHCHD1Q96BP2 118 aaKnown RBP9.3□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y TMEM126AQ9H061 195 aa9.3□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y C3orf22Q8N5N4 141 aa9.29□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y TRAV12-1A0A0B4J245 112 aa9.28□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y IFI27L1Q96BM0 104 aa9.28□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y YPEL4Q96NS1 127 aa9.28□□□□□ -0.92
CD99-211ENST00000623253_PAR_Y LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y CTAG1AP78358 180 aa9.27□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y CBLN2Q8IUK8 224 aa9.27□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y PLEKHB2Q96CS7 222 aa9.27□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y TMEM223A0PJW6 202 aa9.26□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y LINC00158P58513 81 aa9.26□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y LINC00337Q8N6G1 96 aa9.26□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y HIGD2AQ9BW72 106 aa9.26□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y M0R378 163 aa9.25□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y Q8NDZ9 215 aa9.25□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y SPAG11AQ6PDA7 123 aa9.24□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y A0A0U1RRA0 63 aa9.22□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y ATP6V1G1O75348 118 aa9.22□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y HSBP1O75506 76 aa9.22□□□□□ -0.93
CD99-211ENST00000623253_PAR_Y LINC01547P58512 204 aaPredicted RBP9.21□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y HERV-K104P63124 156 aa9.2□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y MEIG1Q5JSS6 88 aa9.2□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y FP248Q71RG6 208 aaPredicted RBP9.2□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y LINC00587B1AMM8 73 aa9.19□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y SMIM13P0DJ93 91 aa9.19□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y FAM19A2Q8N3H0 131 aa9.19□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y DAND5Q8N907 189 aa9.19□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y BOD1L2Q8IYS8 172 aa9.18□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y KRTAP13-3Q3SY46 172 aa9.17□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y MIR7-3HGQ8N6C7 128 aa9.17□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y Q8NBF4 154 aa9.17□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y NDUFA12Q9UI09 145 aa9.17□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y MYMXA0A1B0GTQ4 84 aa9.16□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y H0Y8G0 127 aa9.16□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y PRYO14603 147 aa9.16□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y ASB16-AS1Q495Z4 193 aa9.16□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y MAP1LC3CQ9BXW4 147 aa9.16□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y ZNF706Q9Y5V0 76 aaPredicted RBP9.16□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y LEPROTL1O95214 131 aa9.15□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y TRGC2P03986 189 aa9.15□□□□□ -0.94
CD99-211ENST00000623253_PAR_Y NCR3O14931 201 aa9.14□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y SERF1AO75920 110 aa9.13□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y PLNP26678 52 aa9.13□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y SEC61BP60468 96 aaKnown RBP9.13□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y LEPROTO15243 131 aa9.12□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y SPRR1AP35321 89 aa9.12□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y KRTAP4-1Q9BYQ7 146 aa9.12□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y HSPB8Q9UJY1 196 aa9.12□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y LINC00310P59036 64 aa9.11□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y ETDCA0A1B0GVM5 59 aa9.1□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y SPINK1P00995 79 aa9.1□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y TSPEAR-AS2P59090 65 aa9.1□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y S100A12P80511 92 aa9.1□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y SMCR5Q8TEV8 140 aa9.1□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y TRBV10-3A0A0K0K1G6 114 aa9.09□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y KRTAP4-16G5E9R7 235 aaPredicted RBP9.09□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y HERVK_113P61574 105 aa9.09□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y FSIP2Q5CZC0 6907 aa9.09□□□□□ -0.95
CD99-211ENST00000623253_PAR_Y LOC107984156A0A0G2JMH3 177 aa9.08□□□□□ -0.96
CD99-211ENST00000623253_PAR_Y J3QQQ9 107 aa9.08□□□□□ -0.96
CD99-211ENST00000623253_PAR_Y DPM2O94777 84 aa9.08□□□□□ -0.96
CD99-211ENST00000623253_PAR_Y NMUP48645 174 aa9.08□□□□□ -0.96
CD99-211ENST00000623253_PAR_Y ARL17AQ8IVW1 177 aa9.08□□□□□ -0.96
CD99-211ENST00000623253_PAR_Y FABP4P15090 132 aa9.07□□□□□ -0.96
CD99-211ENST00000623253_PAR_Y TRBV10-2A0A0K0K1G8 114 aa9.06□□□□□ -0.96
CD99-211ENST00000623253_PAR_Y IGKCP01834 107 aa9.06□□□□□ -0.96
CD99-211ENST00000623253_PAR_Y LGALS3P17931 250 aaKnown RBP9.06□□□□□ -0.96
CD99-211ENST00000623253_PAR_Y GAGE2AQ6NT46 116 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms