RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 TRBV7-6A0A0J9YX20 115 aa6.44□□□□□ -1.38
IGHV3-54-201ENST00000622166 ZNF561-AS1K7EIQ3 104 aa6.44□□□□□ -1.38
IGHV3-54-201ENST00000622166 RPL18AQ02543 176 aaKnown RBP6.44□□□□□ -1.38
IGHV3-54-201ENST00000622166 KMT2BQ9UMN6 2715 aaPredicted RBP6.43□□□□□ -1.38
IGHV3-54-201ENST00000622166 FN1P02751 2386 aaKnown RBP6.43□□□□□ -1.38
IGHV3-54-201ENST00000622166 F8WDY8 70 aa6.43□□□□□ -1.38
IGHV3-54-201ENST00000622166 TRBV10-3A0A0K0K1G6 114 aa6.42□□□□□ -1.38
IGHV3-54-201ENST00000622166 EGFEM1PQ0D2K5 195 aa6.42□□□□□ -1.38
IGHV3-54-201ENST00000622166 KPRPQ5T749 579 aaPredicted RBP6.42□□□□□ -1.38
IGHV3-54-201ENST00000622166 C9orf153Q5TBE3 101 aa6.42□□□□□ -1.38
IGHV3-54-201ENST00000622166 Q6ZQT0 140 aa6.42□□□□□ -1.38
IGHV3-54-201ENST00000622166 SETD2Q9BYW2 2564 aaPredicted RBP6.42□□□□□ -1.38
IGHV3-54-201ENST00000622166 TRAV23DV6A0A075B6W5 121 aa6.41□□□□□ -1.38
IGHV3-54-201ENST00000622166 CRYGAP11844 174 aa6.41□□□□□ -1.38
IGHV3-54-201ENST00000622166 PDE6GP18545 87 aa6.41□□□□□ -1.38
IGHV3-54-201ENST00000622166 RBM3P98179 157 aaKnown RBP6.41□□□□□ -1.38
IGHV3-54-201ENST00000622166 WFDC10BQ8IUB3 73 aa6.41□□□□□ -1.38
IGHV3-54-201ENST00000622166 DIRC1Q969H9 104 aa6.41□□□□□ -1.38
IGHV3-54-201ENST00000622166 BAHCC1Q9P281 2608 aa6.41□□□□□ -1.38
IGHV3-54-201ENST00000622166 UNC79Q9P2D8 2635 aa6.4□□□□□ -1.38
IGHV3-54-201ENST00000622166 VPREB1P12018 145 aa6.4□□□□□ -1.38
IGHV3-54-201ENST00000622166 COX7BP24311 80 aa6.4□□□□□ -1.38
IGHV3-54-201ENST00000622166 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.4□□□□□ -1.38
IGHV3-54-201ENST00000622166 ITPR2Q14571 2701 aa6.4□□□□□ -1.39
IGHV3-54-201ENST00000622166 USP17L23D6RBM5 183 aa6.39□□□□□ -1.39
IGHV3-54-201ENST00000622166 M0R378 163 aa6.39□□□□□ -1.39
IGHV3-54-201ENST00000622166 GHRHP01286 108 aa6.39□□□□□ -1.39
IGHV3-54-201ENST00000622166 KRTAP10-11P60412 298 aa6.39□□□□□ -1.39
IGHV3-54-201ENST00000622166 SERP2Q8N6R1 65 aa6.39□□□□□ -1.39
IGHV3-54-201ENST00000622166 C15orf56Q8N910 161 aa6.39□□□□□ -1.39
IGHV3-54-201ENST00000622166 CAMK2N2Q96S95 79 aa6.39□□□□□ -1.39
IGHV3-54-201ENST00000622166 UBL5Q9BZL1 73 aa6.39□□□□□ -1.39
IGHV3-54-201ENST00000622166 RETNQ9HD89 108 aa6.39□□□□□ -1.39
IGHV3-54-201ENST00000622166 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
IGHV3-54-201ENST00000622166 ELOF1P60002 83 aaKnown RBP6.38□□□□□ -1.39
IGHV3-54-201ENST00000622166 Q6ZQY7 126 aa6.38□□□□□ -1.39
IGHV3-54-201ENST00000622166 XAGE1AQ9HD64 81 aa6.38□□□□□ -1.39
IGHV3-54-201ENST00000622166 NIPBLQ6KC79 2804 aaeCLIP6.38□□□□□ -1.39
IGHV3-54-201ENST00000622166 A0A087WVE0 104 aa6.37□□□□□ -1.39
IGHV3-54-201ENST00000622166 BCE1O60756 84 aa6.37□□□□□ -1.39
IGHV3-54-201ENST00000622166 ESRGQ1W209 222 aa6.37□□□□□ -1.39
IGHV3-54-201ENST00000622166 HIGD2BQ4VC39 106 aa6.37□□□□□ -1.39
IGHV3-54-201ENST00000622166 LINC01556Q5JQF7 62 aa6.37□□□□□ -1.39
IGHV3-54-201ENST00000622166 Q6ZRU5 148 aa6.37□□□□□ -1.39
IGHV3-54-201ENST00000622166 Q6ZTC4 211 aa6.37□□□□□ -1.39
IGHV3-54-201ENST00000622166 LAMTOR3Q9UHA4 124 aa6.37□□□□□ -1.39
IGHV3-54-201ENST00000622166 FASNP49327 2511 aaKnown RBP6.36□□□□□ -1.39
IGHV3-54-201ENST00000622166 NDUFC2-KCTD14E9PQ53 114 aa6.36□□□□□ -1.39
IGHV3-54-201ENST00000622166 OXLD1Q5BKU9 147 aa6.36□□□□□ -1.39
IGHV3-54-201ENST00000622166 C3orf56Q8N813 242 aa6.36□□□□□ -1.39
IGHV3-54-201ENST00000622166 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
IGHV3-54-201ENST00000622166 TRBV7-4A0A0J9YYF1 115 aa6.35□□□□□ -1.39
IGHV3-54-201ENST00000622166 DSCR8Q96T75 97 aa6.35□□□□□ -1.39
IGHV3-54-201ENST00000622166 NBPF19A0A087WUL8 3843 aa6.34□□□□□ -1.39
IGHV3-54-201ENST00000622166 CUBNO60494 3623 aa6.34□□□□□ -1.39
IGHV3-54-201ENST00000622166 M0R2N4 97 aa6.34□□□□□ -1.39
IGHV3-54-201ENST00000622166 FAM19A1Q7Z5A9 133 aa6.34□□□□□ -1.39
IGHV3-54-201ENST00000622166 LINC00528Q8N1L1 170 aa6.34□□□□□ -1.39
IGHV3-54-201ENST00000622166 SMIM20Q8N5G0 67 aa6.34□□□□□ -1.39
IGHV3-54-201ENST00000622166 C1orf43Q9BWL3 253 aa6.34□□□□□ -1.39
IGHV3-54-201ENST00000622166 NOTCH2Q04721 2471 aa6.34□□□□□ -1.4
IGHV3-54-201ENST00000622166 GCN1Q92616 2671 aaKnown RBP6.33□□□□□ -1.4
IGHV3-54-201ENST00000622166 SYCNQ0VAF6 134 aa6.33□□□□□ -1.4
IGHV3-54-201ENST00000622166 Q6ZVQ6 151 aa6.33□□□□□ -1.4
IGHV3-54-201ENST00000622166 SVIPQ8NHG7 77 aa6.33□□□□□ -1.4
IGHV3-54-201ENST00000622166 HELZ2Q9BYK8 2649 aaKnown RBP6.32□□□□□ -1.4
IGHV3-54-201ENST00000622166 DEFB131BA0A096LNP1 70 aa6.32□□□□□ -1.4
IGHV3-54-201ENST00000622166 DNAH10OSP0CZ25 163 aa6.32□□□□□ -1.4
IGHV3-54-201ENST00000622166 PLA2G2DQ9UNK4 145 aa6.32□□□□□ -1.4
IGHV3-54-201ENST00000622166 TLX1NBP0CAT3 122 aa6.31□□□□□ -1.4
IGHV3-54-201ENST00000622166 LINC01547P58512 204 aaPredicted RBP6.31□□□□□ -1.4
IGHV3-54-201ENST00000622166 CXCL6P80162 114 aa6.31□□□□□ -1.4
IGHV3-54-201ENST00000622166 C11orf45Q8TAV5 145 aa6.31□□□□□ -1.4
IGHV3-54-201ENST00000622166 IGKV2D-24A0A075B6R9 120 aa6.3□□□□□ -1.4
IGHV3-54-201ENST00000622166 RPS28P62857 69 aaKnown RBP6.3□□□□□ -1.4
IGHV3-54-201ENST00000622166 Q6ZRP5 223 aa6.3□□□□□ -1.4
IGHV3-54-201ENST00000622166 KCNQ1DNQ9H478 68 aa6.3□□□□□ -1.4
IGHV3-54-201ENST00000622166 NBEAL2Q6ZNJ1 2754 aa6.3□□□□□ -1.4
IGHV3-54-201ENST00000622166 NSD1Q96L73 2696 aaPredicted RBP6.29□□□□□ -1.4
IGHV3-54-201ENST00000622166 IGLV5-37A0A075B6J1 123 aa6.29□□□□□ -1.4
IGHV3-54-201ENST00000622166 TMEM258P61165 79 aa6.29□□□□□ -1.4
IGHV3-54-201ENST00000622166 KRTAP24-1Q3LI83 254 aa6.29□□□□□ -1.4
IGHV3-54-201ENST00000622166 VWFP04275 2813 aa6.28□□□□□ -1.4
IGHV3-54-201ENST00000622166 TRAV7A0A075B6U4 112 aa6.28□□□□□ -1.4
IGHV3-54-201ENST00000622166 CYSTM1Q9H1C7 97 aa6.28□□□□□ -1.4
IGHV3-54-201ENST00000622166 TRAV10A0A0B4J240 114 aa6.27□□□□□ -1.41
IGHV3-54-201ENST00000622166 HAMPP81172 84 aa6.27□□□□□ -1.41
IGHV3-54-201ENST00000622166 C7orf33Q8WU49 177 aa6.27□□□□□ -1.41
IGHV3-54-201ENST00000622166 LOC107984640A0A0U1RRK4 108 aa6.26□□□□□ -1.41
IGHV3-54-201ENST00000622166 J3KT08 172 aa6.26□□□□□ -1.41
IGHV3-54-201ENST00000622166 SERTAD4-AS1Q5TG53 156 aa6.26□□□□□ -1.41
IGHV3-54-201ENST00000622166 NKAPP1Q8N9T2 125 aa6.26□□□□□ -1.41
IGHV3-54-201ENST00000622166 TEP1Q99973 2627 aaKnown RBP6.26□□□□□ -1.41
IGHV3-54-201ENST00000622166 OTOGQ6ZRI0 2925 aa6.25□□□□□ -1.41
IGHV3-54-201ENST00000622166 PRYO14603 147 aa6.25□□□□□ -1.41
IGHV3-54-201ENST00000622166 MRAPQ8TCY5 172 aa6.25□□□□□ -1.41
IGHV3-54-201ENST00000622166 RMI2Q96E14 147 aa6.25□□□□□ -1.41
IGHV3-54-201ENST00000622166 TENM1Q9UKZ4 2725 aa6.24□□□□□ -1.41
IGHV3-54-201ENST00000622166 SPRR1AP35321 89 aa6.24□□□□□ -1.41
IGHV3-54-201ENST00000622166 DHRS4-AS1Q9P1J3 65 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms