RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 HELZ2Q9BYK8 2649 aaKnown RBP10.76□□□□□ -0.69
NPHP4-211ENST00000622020 KRTAP10-3P60369 221 aa10.76□□□□□ -0.69
NPHP4-211ENST00000622020 UNC79Q9P2D8 2635 aa10.76□□□□□ -0.69
NPHP4-211ENST00000622020 GHRHP01286 108 aa10.75□□□□□ -0.69
NPHP4-211ENST00000622020 XAGE1AQ9HD64 81 aa10.75□□□□□ -0.69
NPHP4-211ENST00000622020 JMJD7-PLA2G4BH0Y9G9 81 aa10.74□□□□□ -0.69
NPHP4-211ENST00000622020 RPS28P62857 69 aaKnown RBP10.74□□□□□ -0.69
NPHP4-211ENST00000622020 HRCT1Q6UXD1 115 aa10.74□□□□□ -0.69
NPHP4-211ENST00000622020 HECTD1Q9ULT8 2610 aa10.74□□□□□ -0.69
NPHP4-211ENST00000622020 TMEM258P61165 79 aa10.74□□□□□ -0.69
NPHP4-211ENST00000622020 KRTAP1-1Q07627 177 aa10.74□□□□□ -0.69
NPHP4-211ENST00000622020 HAMPP81172 84 aa10.73□□□□□ -0.69
NPHP4-211ENST00000622020 KLK12Q9UKR0 248 aa10.73□□□□□ -0.69
NPHP4-211ENST00000622020 SPAG11BQ08648 103 aa10.72□□□□□ -0.69
NPHP4-211ENST00000622020 CELA1Q9UNI1 258 aa10.72□□□□□ -0.69
NPHP4-211ENST00000622020 UBL5Q9BZL1 73 aa10.72□□□□□ -0.69
NPHP4-211ENST00000622020 PKD1L1Q8TDX9 2849 aa10.72□□□□□ -0.69
NPHP4-211ENST00000622020 TEP1Q99973 2627 aaKnown RBP10.72□□□□□ -0.69
NPHP4-211ENST00000622020 CYSRT1A8MQ03 144 aa10.71□□□□□ -0.69
NPHP4-211ENST00000622020 DAD1P61803 113 aa10.71□□□□□ -0.69
NPHP4-211ENST00000622020 RBM3P98179 157 aaKnown RBP10.71□□□□□ -0.7
NPHP4-211ENST00000622020 Q6ZQY7 126 aa10.71□□□□□ -0.7
NPHP4-211ENST00000622020 LINC00575Q6W349 94 aa10.7□□□□□ -0.7
NPHP4-211ENST00000622020 C20orf197Q8N268 126 aa10.7□□□□□ -0.7
NPHP4-211ENST00000622020 LINC00612Q8N6U2 182 aa10.7□□□□□ -0.7
NPHP4-211ENST00000622020 C16orf95Q9H693 158 aa10.7□□□□□ -0.7
NPHP4-211ENST00000622020 IGHV4-28A0A0C4DH34 117 aa10.69□□□□□ -0.7
NPHP4-211ENST00000622020 LINC00167Q96N53 147 aa10.69□□□□□ -0.7
NPHP4-211ENST00000622020 HIVEP1P15822 2718 aa10.69□□□□□ -0.7
NPHP4-211ENST00000622020 NDUFC2O95298 119 aa10.69□□□□□ -0.7
NPHP4-211ENST00000622020 SCXQ7RTU7 201 aa10.69□□□□□ -0.7
NPHP4-211ENST00000622020 COX17Q14061 63 aa10.68□□□□□ -0.7
NPHP4-211ENST00000622020 Q5XG85 94 aa10.67□□□□□ -0.7
NPHP4-211ENST00000622020 OTOGQ6ZRI0 2925 aa10.66□□□□□ -0.7
NPHP4-211ENST00000622020 TRBV10-3A0A0K0K1G6 114 aa10.66□□□□□ -0.7
NPHP4-211ENST00000622020 HIGD2BQ4VC39 106 aa10.66□□□□□ -0.7
NPHP4-211ENST00000622020 Q6ZQT0 140 aa10.65□□□□□ -0.71
NPHP4-211ENST00000622020 TRAV10A0A0B4J240 114 aa10.62□□□□□ -0.71
NPHP4-211ENST00000622020 LYRM9A8MSI8 78 aa10.62□□□□□ -0.71
NPHP4-211ENST00000622020 ZNF561-AS1K7EIQ3 104 aa10.61□□□□□ -0.71
NPHP4-211ENST00000622020 LINC01547P58512 204 aaPredicted RBP10.61□□□□□ -0.71
NPHP4-211ENST00000622020 SNURFQ9Y675 71 aa10.61□□□□□ -0.71
NPHP4-211ENST00000622020 Q6ZVQ6 151 aa10.6□□□□□ -0.71
NPHP4-211ENST00000622020 C6orf48Q9UBA6 75 aa10.6□□□□□ -0.71
NPHP4-211ENST00000622020 IGLV6-57P01721 117 aa10.58□□□□□ -0.72
NPHP4-211ENST00000622020 ATP5EP2Q5VTU8 51 aa10.58□□□□□ -0.72
NPHP4-211ENST00000622020 LYPD5Q6UWN5 251 aa10.57□□□□□ -0.72
NPHP4-211ENST00000622020 WIPF1O43516 503 aa10.57□□□□□ -0.72
NPHP4-211ENST00000622020 DIRC1Q969H9 104 aa10.57□□□□□ -0.72
NPHP4-211ENST00000622020 ZNF73O43830 326 aaPredicted RBP10.55□□□□□ -0.72
NPHP4-211ENST00000622020 Q8N9L7 120 aa10.55□□□□□ -0.72
NPHP4-211ENST00000622020 Q8NAQ8 132 aa10.55□□□□□ -0.72
NPHP4-211ENST00000622020 LELP1Q5T871 98 aa10.55□□□□□ -0.72
NPHP4-211ENST00000622020 A0A0J9YWU9 116 aa10.55□□□□□ -0.72
NPHP4-211ENST00000622020 FAM236DA0A1B0GTK5 79 aa10.55□□□□□ -0.72
NPHP4-211ENST00000622020 SPART-AS1P0CW21 52 aa10.55□□□□□ -0.72
NPHP4-211ENST00000622020 IGHV4-30-4P0DP06 118 aa10.55□□□□□ -0.72
NPHP4-211ENST00000622020 FAM236CP0DP71 79 aa10.55□□□□□ -0.72
NPHP4-211ENST00000622020 MUC7Q8TAX7 377 aa10.55□□□□□ -0.72
NPHP4-211ENST00000622020 F8P00451 2351 aa10.54□□□□□ -0.72
NPHP4-211ENST00000622020 WFDC10BQ8IUB3 73 aa10.54□□□□□ -0.72
NPHP4-211ENST00000622020 CAMK2N2Q96S95 79 aa10.54□□□□□ -0.72
NPHP4-211ENST00000622020 RMI2Q96E14 147 aa10.54□□□□□ -0.72
NPHP4-211ENST00000622020 J3QKU1 62 aa10.53□□□□□ -0.72
NPHP4-211ENST00000622020 APOC4P55056 127 aa10.53□□□□□ -0.72
NPHP4-211ENST00000622020 COX7BP24311 80 aa10.52□□□□□ -0.72
NPHP4-211ENST00000622020 C9orf66Q5T8R8 295 aa10.52□□□□□ -0.72
NPHP4-211ENST00000622020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.52□□□□□ -0.72
NPHP4-211ENST00000622020 LOC110117498A0A087WWA1 95 aa10.52□□□□□ -0.73
NPHP4-211ENST00000622020 DEFB105AQ8NG35 78 aa10.51□□□□□ -0.73
NPHP4-211ENST00000622020 RETNQ9HD89 108 aa10.51□□□□□ -0.73
NPHP4-211ENST00000622020 NSD1Q96L73 2696 aaPredicted RBP10.51□□□□□ -0.73
NPHP4-211ENST00000622020 PRR34Q9NV39 138 aa10.5□□□□□ -0.73
NPHP4-211ENST00000622020 H7BZZ5 65 aa10.5□□□□□ -0.73
NPHP4-211ENST00000622020 TM2D3Q9BRN9 247 aa10.5□□□□□ -0.73
NPHP4-211ENST00000622020 INAFM1C9JVW0 142 aa10.5□□□□□ -0.73
NPHP4-211ENST00000622020 Q6ZRU5 148 aa10.5□□□□□ -0.73
NPHP4-211ENST00000622020 TENM3Q9P273 2699 aa10.49□□□□□ -0.73
NPHP4-211ENST00000622020 LINC00336Q6ZUF6 198 aa10.48□□□□□ -0.73
NPHP4-211ENST00000622020 MIFP14174 115 aa10.47□□□□□ -0.73
NPHP4-211ENST00000622020 C3orf84H3BNL1 204 aa10.47□□□□□ -0.73
NPHP4-211ENST00000622020 TRAV7A0A075B6U4 112 aa10.47□□□□□ -0.73
NPHP4-211ENST00000622020 NDUFC2-KCTD14E9PQ53 114 aa10.47□□□□□ -0.73
NPHP4-211ENST00000622020 BAHCC1Q9P281 2608 aa10.46□□□□□ -0.74
NPHP4-211ENST00000622020 F8WEM9 126 aa10.45□□□□□ -0.74
NPHP4-211ENST00000622020 VPREB1P12018 145 aa10.45□□□□□ -0.74
NPHP4-211ENST00000622020 ELOF1P60002 83 aaKnown RBP10.45□□□□□ -0.74
NPHP4-211ENST00000622020 TRBV7-4A0A0J9YYF1 115 aa10.44□□□□□ -0.74
NPHP4-211ENST00000622020 KPRPQ5T749 579 aaPredicted RBP10.44□□□□□ -0.74
NPHP4-211ENST00000622020 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
NPHP4-211ENST00000622020 SERP1Q9Y6X1 66 aa10.43□□□□□ -0.74
NPHP4-211ENST00000622020 Q6ZRP5 223 aa10.42□□□□□ -0.74
NPHP4-211ENST00000622020 FLNBO75369 2602 aaKnown RBP10.42□□□□□ -0.74
NPHP4-211ENST00000622020 BPY2O14599 106 aa10.42□□□□□ -0.74
NPHP4-211ENST00000622020 Q6ZTC4 211 aa10.42□□□□□ -0.74
NPHP4-211ENST00000622020 GVQW2A0A096LPI5 108 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-211ENST00000622020 LINC00474Q9P2X8 69 aa10.41□□□□□ -0.74
NPHP4-211ENST00000622020 NOTCH1P46531 2555 aa10.41□□□□□ -0.74
NPHP4-211ENST00000622020 MAST4O15021 2626 aa10.41□□□□□ -0.74
NPHP4-211ENST00000622020 PDE6GP18545 87 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms