RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 Q6ZRP5 223 aa6.89□□□□□ -1.31
CPNE3-212ENST00000621783 KMT2AQ03164 3969 aa6.89□□□□□ -1.31
CPNE3-212ENST00000621783 DNAH10Q8IVF4 4471 aa6.88□□□□□ -1.31
CPNE3-212ENST00000621783 LOC107984156A0A0G2JMH3 177 aa6.88□□□□□ -1.31
CPNE3-212ENST00000621783 LOC107984640A0A0U1RRK4 108 aa6.88□□□□□ -1.31
CPNE3-212ENST00000621783 A0A1B0GWB2 263 aa6.88□□□□□ -1.31
CPNE3-212ENST00000621783 A6NDN8 102 aa6.88□□□□□ -1.31
CPNE3-212ENST00000621783 GAGE2EQ4V326 116 aa6.88□□□□□ -1.31
CPNE3-212ENST00000621783 ARL17AQ8IVW1 177 aa6.88□□□□□ -1.31
CPNE3-212ENST00000621783 XAGE1AQ9HD64 81 aa6.88□□□□□ -1.31
CPNE3-212ENST00000621783 GAGE2DQ9UEU5 116 aa6.88□□□□□ -1.31
CPNE3-212ENST00000621783 A0A0B4J2C4 111 aa6.87□□□□□ -1.31
CPNE3-212ENST00000621783 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
CPNE3-212ENST00000621783 CFC1P0CG37 223 aa6.87□□□□□ -1.31
CPNE3-212ENST00000621783 Q8NDZ9 215 aa6.87□□□□□ -1.31
CPNE3-212ENST00000621783 FUSP35637 526 aaKnown RBP eCLIP6.86□□□□□ -1.31
CPNE3-212ENST00000621783 GAGE2BQ13066 116 aa6.86□□□□□ -1.31
CPNE3-212ENST00000621783 COL5A1-AS1Q5SY13 56 aa6.86□□□□□ -1.31
CPNE3-212ENST00000621783 C9orf129Q5T035 196 aaKnown RBP6.86□□□□□ -1.31
CPNE3-212ENST00000621783 C9orf163Q8N9P6 203 aa6.86□□□□□ -1.31
CPNE3-212ENST00000621783 IGKV2-28A0A075B6P5 120 aa6.85□□□□□ -1.31
CPNE3-212ENST00000621783 NDUFC2O95298 119 aa6.85□□□□□ -1.31
CPNE3-212ENST00000621783 IGKV2D-28P01615 120 aa6.85□□□□□ -1.31
CPNE3-212ENST00000621783 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
CPNE3-212ENST00000621783 RAB37Q96AX2 223 aa6.85□□□□□ -1.31
CPNE3-212ENST00000621783 A0A096LNI7 61 aa6.84□□□□□ -1.31
CPNE3-212ENST00000621783 IGLV5-52A0A0A0MRZ9 124 aa6.84□□□□□ -1.31
CPNE3-212ENST00000621783 PKIGQ9Y2B9 76 aa6.84□□□□□ -1.31
CPNE3-212ENST00000621783 C16orf90A8MZG2 172 aa6.83□□□□□ -1.32
CPNE3-212ENST00000621783 TAX1BP3O14907 124 aa6.83□□□□□ -1.32
CPNE3-212ENST00000621783 NCR3O14931 201 aa6.83□□□□□ -1.32
CPNE3-212ENST00000621783 VPREB1P12018 145 aa6.83□□□□□ -1.32
CPNE3-212ENST00000621783 LBHQ53QV2 105 aaPredicted RBP6.83□□□□□ -1.32
CPNE3-212ENST00000621783 PRO1854Q9UHT4 67 aa6.83□□□□□ -1.32
CPNE3-212ENST00000621783 IGKV2-24A0A0C4DH68 120 aa6.82□□□□□ -1.32
CPNE3-212ENST00000621783 RPL13AP40429 203 aaKnown RBP6.82□□□□□ -1.32
CPNE3-212ENST00000621783 PRR3P79522 188 aaKnown RBP6.82□□□□□ -1.32
CPNE3-212ENST00000621783 SERTAD4-AS1Q5TG53 156 aa6.82□□□□□ -1.32
CPNE3-212ENST00000621783 LINC00337Q8N6G1 96 aa6.82□□□□□ -1.32
CPNE3-212ENST00000621783 DNAH2Q9P225 4427 aa6.81□□□□□ -1.32
CPNE3-212ENST00000621783 H7C2G1 150 aa6.81□□□□□ -1.32
CPNE3-212ENST00000621783 TSPAN13O95857 204 aa6.81□□□□□ -1.32
CPNE3-212ENST00000621783 CHTF8P0CG12 524 aa6.81□□□□□ -1.32
CPNE3-212ENST00000621783 KRTAP10-2P60368 255 aa6.81□□□□□ -1.32
CPNE3-212ENST00000621783 SDIM1Q6ZPB5 146 aa6.81□□□□□ -1.32
CPNE3-212ENST00000621783 PLA2G2DQ9UNK4 145 aa6.81□□□□□ -1.32
CPNE3-212ENST00000621783 TRAV13-2A0A0B4J235 113 aa6.8□□□□□ -1.32
CPNE3-212ENST00000621783 FAM168BA1KXE4 195 aa6.8□□□□□ -1.32
CPNE3-212ENST00000621783 LINC00336Q6ZUF6 198 aa6.8□□□□□ -1.32
CPNE3-212ENST00000621783 NAA38Q9BRA0 125 aaKnown RBP6.8□□□□□ -1.32
CPNE3-212ENST00000621783 SACSQ9NZJ4 4579 aa6.8□□□□□ -1.32
CPNE3-212ENST00000621783 FRAS1Q86XX4 4008 aa6.79□□□□□ -1.32
CPNE3-212ENST00000621783 IGLV5-37A0A075B6J1 123 aa6.79□□□□□ -1.32
CPNE3-212ENST00000621783 TRBV10-2A0A0K0K1G8 114 aa6.79□□□□□ -1.32
CPNE3-212ENST00000621783 C9orf118A6NHY6 69 aa6.79□□□□□ -1.32
CPNE3-212ENST00000621783 Q1RN00 199 aa6.79□□□□□ -1.32
CPNE3-212ENST00000621783 FAM19A5Q7Z5A7 132 aaPredicted RBP6.79□□□□□ -1.32
CPNE3-212ENST00000621783 KRTAP7-1Q8IUC3 87 aa6.79□□□□□ -1.32
CPNE3-212ENST00000621783 OR13C6PQ8NH95 151 aa6.79□□□□□ -1.32
CPNE3-212ENST00000621783 DNAH17Q9UFH2 4485 aa6.79□□□□□ -1.32
CPNE3-212ENST00000621783 H3BUT2 72 aa6.78□□□□□ -1.32
CPNE3-212ENST00000621783 PANO1I0J062 215 aa6.78□□□□□ -1.32
CPNE3-212ENST00000621783 NKAPP1Q8N9T2 125 aa6.78□□□□□ -1.32
CPNE3-212ENST00000621783 SPACA4Q8TDM5 124 aa6.78□□□□□ -1.32
CPNE3-212ENST00000621783 A0A1W2PNN7 141 aa6.77□□□□□ -1.33
CPNE3-212ENST00000621783 M0R378 163 aa6.77□□□□□ -1.33
CPNE3-212ENST00000621783 S100A7L2Q5SY68 101 aa6.77□□□□□ -1.33
CPNE3-212ENST00000621783 LINC00474Q9P2X8 69 aa6.77□□□□□ -1.33
CPNE3-212ENST00000621783 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-212ENST00000621783 HYDINQ4G0P3 5121 aa6.77□□□□□ -1.33
CPNE3-212ENST00000621783 TRBV10-3A0A0K0K1G6 114 aa6.76□□□□□ -1.33
CPNE3-212ENST00000621783 IGLV6-57P01721 117 aa6.76□□□□□ -1.33
CPNE3-212ENST00000621783 C7orf33Q8WU49 177 aa6.76□□□□□ -1.33
CPNE3-212ENST00000621783 TMEM126AQ9H061 195 aa6.76□□□□□ -1.33
CPNE3-212ENST00000621783 A0A1B0GVY2 172 aa6.75□□□□□ -1.33
CPNE3-212ENST00000621783 GAGE10A6NGK3 116 aa6.75□□□□□ -1.33
CPNE3-212ENST00000621783 M0QXV9 152 aa6.75□□□□□ -1.33
CPNE3-212ENST00000621783 SMIM11BQ8TCY0 68 aa6.75□□□□□ -1.33
CPNE3-212ENST00000621783 C22orf24Q9Y442 160 aa6.75□□□□□ -1.33
CPNE3-212ENST00000621783 A0A1B0GV90 55 aa6.74□□□□□ -1.33
CPNE3-212ENST00000621783 A0A1W2PPM0 123 aa6.74□□□□□ -1.33
CPNE3-212ENST00000621783 TRIAP1O43715 76 aa6.74□□□□□ -1.33
CPNE3-212ENST00000621783 RPL28P46779 137 aaKnown RBP6.74□□□□□ -1.33
CPNE3-212ENST00000621783 PSMB2P49721 201 aa6.74□□□□□ -1.33
CPNE3-212ENST00000621783 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
CPNE3-212ENST00000621783 TRAV23DV6A0A075B6W5 121 aa6.73□□□□□ -1.33
CPNE3-212ENST00000621783 LINC00167Q96N53 147 aa6.73□□□□□ -1.33
CPNE3-212ENST00000621783 A0A087WYN8 130 aa6.72□□□□□ -1.33
CPNE3-212ENST00000621783 FABP2P12104 132 aa6.72□□□□□ -1.33
CPNE3-212ENST00000621783 KRTAP10-1P60331 282 aa6.72□□□□□ -1.33
CPNE3-212ENST00000621783 FAT2Q9NYQ8 4349 aa6.71□□□□□ -1.33
CPNE3-212ENST00000621783 RPL37AP8A6NKH3 93 aa6.71□□□□□ -1.34
CPNE3-212ENST00000621783 EPM2AB3EWF7 344 aa6.71□□□□□ -1.34
CPNE3-212ENST00000621783 LYRM7Q5U5X0 104 aa6.71□□□□□ -1.34
CPNE3-212ENST00000621783 PHF5AQ7RTV0 110 aaKnown RBP6.71□□□□□ -1.34
CPNE3-212ENST00000621783 DPH3Q96FX2 82 aa6.71□□□□□ -1.34
CPNE3-212ENST00000621783 IGLV1-50A0A075B6I6 118 aa6.7□□□□□ -1.34
CPNE3-212ENST00000621783 PRYO14603 147 aa6.7□□□□□ -1.34
CPNE3-212ENST00000621783 VAMP3Q15836 100 aa6.7□□□□□ -1.34
CPNE3-212ENST00000621783 C6orf99Q4VX62 202 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms