RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 TIMM17BO60830 172 aa13.35□□□□□ -0.27
LAPTM4B-204ENST00000619747 MIFP14174 115 aa13.35□□□□□ -0.27
LAPTM4B-204ENST00000619747 GHRHP01286 108 aa13.34□□□□□ -0.27
LAPTM4B-204ENST00000619747 FAM236DA0A1B0GTK5 79 aa13.34□□□□□ -0.27
LAPTM4B-204ENST00000619747 SPART-AS1P0CW21 52 aa13.34□□□□□ -0.27
LAPTM4B-204ENST00000619747 FAM236CP0DP71 79 aa13.34□□□□□ -0.27
LAPTM4B-204ENST00000619747 NDUFC2O95298 119 aa13.33□□□□□ -0.28
LAPTM4B-204ENST00000619747 LINC00269Q8N2A0 174 aa13.33□□□□□ -0.28
LAPTM4B-204ENST00000619747 COX7B2Q8TF08 81 aa13.33□□□□□ -0.28
LAPTM4B-204ENST00000619747 TRAV23DV6A0A075B6W5 121 aa13.32□□□□□ -0.28
LAPTM4B-204ENST00000619747 RPL28P46779 137 aaKnown RBP13.31□□□□□ -0.28
LAPTM4B-204ENST00000619747 SEC61GP60059 68 aa13.31□□□□□ -0.28
LAPTM4B-204ENST00000619747 MGAM2Q2M2H8 2515 aa13.3□□□□□ -0.28
LAPTM4B-204ENST00000619747 ANGP03950 147 aaKnown RBP13.3□□□□□ -0.28
LAPTM4B-204ENST00000619747 A0A0U1RQV1 116 aa13.29□□□□□ -0.28
LAPTM4B-204ENST00000619747 NDUFC2-KCTD14E9PQ53 114 aa13.29□□□□□ -0.28
LAPTM4B-204ENST00000619747 PRB2P02812 416 aaPredicted RBP13.28□□□□□ -0.28
LAPTM4B-204ENST00000619747 CMYA5Q8N3K9 4069 aa13.28□□□□□ -0.28
LAPTM4B-204ENST00000619747 A0A087WZ39 114 aa13.27□□□□□ -0.28
LAPTM4B-204ENST00000619747 NCR3O14931 201 aa13.27□□□□□ -0.28
LAPTM4B-204ENST00000619747 A0A087WYN8 130 aa13.27□□□□□ -0.29
LAPTM4B-204ENST00000619747 A0A1B0GUV1 79 aa13.27□□□□□ -0.29
LAPTM4B-204ENST00000619747 SS18Q15532 418 aa13.27□□□□□ -0.29
LAPTM4B-204ENST00000619747 MIR7-3HGQ8N6C7 128 aa13.27□□□□□ -0.29
LAPTM4B-204ENST00000619747 SERP1Q9Y6X1 66 aa13.27□□□□□ -0.29
LAPTM4B-204ENST00000619747 LINC00158P58513 81 aa13.26□□□□□ -0.29
LAPTM4B-204ENST00000619747 C6orf226Q5I0X4 101 aa13.26□□□□□ -0.29
LAPTM4B-204ENST00000619747 EPM2AB3EWF7 344 aa13.25□□□□□ -0.29
LAPTM4B-204ENST00000619747 FP248Q71RG6 208 aaPredicted RBP13.25□□□□□ -0.29
LAPTM4B-204ENST00000619747 FAM19A1Q7Z5A9 133 aa13.25□□□□□ -0.29
LAPTM4B-204ENST00000619747 REG3AQ06141 175 aa13.23□□□□□ -0.29
LAPTM4B-204ENST00000619747 V9GYY9 64 aa13.23□□□□□ -0.29
LAPTM4B-204ENST00000619747 H7BZZ5 65 aa13.22□□□□□ -0.29
LAPTM4B-204ENST00000619747 BRK1Q8WUW1 75 aa13.22□□□□□ -0.29
LAPTM4B-204ENST00000619747 CHCHD10Q8WYQ3 142 aaPredicted RBP13.21□□□□□ -0.29
LAPTM4B-204ENST00000619747 ENHOQ6UWT2 76 aa13.2□□□□□ -0.3
LAPTM4B-204ENST00000619747 Q6ZTC4 211 aa13.2□□□□□ -0.3
LAPTM4B-204ENST00000619747 LYPD5Q6UWN5 251 aa13.2□□□□□ -0.3
LAPTM4B-204ENST00000619747 LINC00474Q9P2X8 69 aa13.2□□□□□ -0.3
LAPTM4B-204ENST00000619747 KLK12Q9UKR0 248 aa13.2□□□□□ -0.3
LAPTM4B-204ENST00000619747 SLPIP03973 132 aa13.2□□□□□ -0.3
LAPTM4B-204ENST00000619747 C1orf195Q5TG92 126 aa13.19□□□□□ -0.3
LAPTM4B-204ENST00000619747 OBSCN-AS1Q96MR7 158 aa13.19□□□□□ -0.3
LAPTM4B-204ENST00000619747 LINC00337Q8N6G1 96 aa13.18□□□□□ -0.3
LAPTM4B-204ENST00000619747 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
LAPTM4B-204ENST00000619747 SND1-IT1Q9HBX3 110 aa13.17□□□□□ -0.3
LAPTM4B-204ENST00000619747 SMIM26A0A096LP01 95 aa13.16□□□□□ -0.3
LAPTM4B-204ENST00000619747 LECT2O14960 151 aa13.16□□□□□ -0.3
LAPTM4B-204ENST00000619747 A0A0J9YWU9 116 aa13.16□□□□□ -0.3
LAPTM4B-204ENST00000619747 CRPP02741 224 aa13.16□□□□□ -0.3
LAPTM4B-204ENST00000619747 EGFEM1PQ0D2K5 195 aa13.16□□□□□ -0.3
LAPTM4B-204ENST00000619747 SNURFQ9Y675 71 aa13.16□□□□□ -0.3
LAPTM4B-204ENST00000619747 CCL18P55774 89 aa13.15□□□□□ -0.3
LAPTM4B-204ENST00000619747 NANOS2P60321 138 aaKnown RBP13.15□□□□□ -0.3
LAPTM4B-204ENST00000619747 C9orf116Q5BN46 136 aaPredicted RBP13.15□□□□□ -0.3
LAPTM4B-204ENST00000619747 LELP1Q5T871 98 aa13.15□□□□□ -0.3
LAPTM4B-204ENST00000619747 SMIM11BQ8TCY0 68 aa13.15□□□□□ -0.3
LAPTM4B-204ENST00000619747 KPRPQ5T749 579 aaPredicted RBP13.15□□□□□ -0.31
LAPTM4B-204ENST00000619747 CD164L2Q6UWJ8 174 aa13.15□□□□□ -0.31
LAPTM4B-204ENST00000619747 TRAV13-2A0A0B4J235 113 aa13.13□□□□□ -0.31
LAPTM4B-204ENST00000619747 IGKV2-28A0A075B6P5 120 aa13.12□□□□□ -0.31
LAPTM4B-204ENST00000619747 IGKV2D-28P01615 120 aa13.12□□□□□ -0.31
LAPTM4B-204ENST00000619747 RMI2Q96E14 147 aa13.12□□□□□ -0.31
LAPTM4B-204ENST00000619747 IBA57-AS1B1ANH7 110 aa13.12□□□□□ -0.31
LAPTM4B-204ENST00000619747 WFDC10BQ8IUB3 73 aa13.12□□□□□ -0.31
LAPTM4B-204ENST00000619747 CCKP06307 115 aa13.11□□□□□ -0.31
LAPTM4B-204ENST00000619747 C6orf223Q8N319 242 aa13.11□□□□□ -0.31
LAPTM4B-204ENST00000619747 Q8IZM0 81 aa13.1□□□□□ -0.31
LAPTM4B-204ENST00000619747 F8WEM9 126 aa13.09□□□□□ -0.31
LAPTM4B-204ENST00000619747 PRR3P79522 188 aaKnown RBP13.09□□□□□ -0.31
LAPTM4B-204ENST00000619747 RBM3P98179 157 aaKnown RBP13.09□□□□□ -0.31
LAPTM4B-204ENST00000619747 KIAA0087Q14695 138 aa13.09□□□□□ -0.31
LAPTM4B-204ENST00000619747 TRBV7-6A0A0J9YX20 115 aa13.07□□□□□ -0.32
LAPTM4B-204ENST00000619747 S100A7L2Q5SY68 101 aa13.06□□□□□ -0.32
LAPTM4B-204ENST00000619747 C10orf25Q5T742 122 aa13.06□□□□□ -0.32
LAPTM4B-204ENST00000619747 C11orf45Q8TAV5 145 aa13.06□□□□□ -0.32
LAPTM4B-204ENST00000619747 DEFB131BA0A096LNP1 70 aa13.05□□□□□ -0.32
LAPTM4B-204ENST00000619747 H0YGX0 51 aa13.05□□□□□ -0.32
LAPTM4B-204ENST00000619747 UNQ6190/PRO20217Q6UXQ8 127 aa13.05□□□□□ -0.32
LAPTM4B-204ENST00000619747 TRAV7A0A075B6U4 112 aa13.04□□□□□ -0.32
LAPTM4B-204ENST00000619747 ESRGQ1W209 222 aa13.04□□□□□ -0.32
LAPTM4B-204ENST00000619747 ATP5EP2Q5VTU8 51 aa13.04□□□□□ -0.32
LAPTM4B-204ENST00000619747 KLKP1Q107X0 134 aa13.04□□□□□ -0.32
LAPTM4B-204ENST00000619747 ORMDL1Q9P0S3 153 aa13.04□□□□□ -0.32
LAPTM4B-204ENST00000619747 MPLKIPQ8TAP9 179 aa13.03□□□□□ -0.32
LAPTM4B-204ENST00000619747 DNAH3Q8TD57 4116 aa13.03□□□□□ -0.32
LAPTM4B-204ENST00000619747 SPAG11BQ08648 103 aa13.03□□□□□ -0.32
LAPTM4B-204ENST00000619747 TRAV10A0A0B4J240 114 aa13.02□□□□□ -0.32
LAPTM4B-204ENST00000619747 PRR34Q9NV39 138 aa13.02□□□□□ -0.32
LAPTM4B-204ENST00000619747 STAB2Q8WWQ8 2551 aa13.02□□□□□ -0.33
LAPTM4B-204ENST00000619747 UBL5Q9BZL1 73 aa13□□□□□ -0.33
LAPTM4B-204ENST00000619747 FAM229BQ4G0N7 80 aa12.98□□□□□ -0.33
LAPTM4B-204ENST00000619747 HIGD2BQ4VC39 106 aa12.98□□□□□ -0.33
LAPTM4B-204ENST00000619747 Q8NDZ9 215 aa12.96□□□□□ -0.33
LAPTM4B-204ENST00000619747 TRBV10-3A0A0K0K1G6 114 aa12.96□□□□□ -0.34
LAPTM4B-204ENST00000619747 K7EIL1 84 aa12.96□□□□□ -0.34
LAPTM4B-204ENST00000619747 COL7A1Q02388 2944 aa12.95□□□□□ -0.34
LAPTM4B-204ENST00000619747 H3BNG1 76 aa12.94□□□□□ -0.34
LAPTM4B-204ENST00000619747 JMJD7-PLA2G4BH0Y9G9 81 aa12.93□□□□□ -0.34
LAPTM4B-204ENST00000619747 HAMPP81172 84 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms