RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 C6orf48Q9UBA6 75 aa13.43□□□□□ -0.26
MMP28-207ENST00000619655 TRBV10-2A0A0K0K1G8 114 aa13.42□□□□□ -0.26
MMP28-207ENST00000619655 LST1O00453 97 aa13.42□□□□□ -0.26
MMP28-207ENST00000619655 ANAPC13Q9BS18 74 aa13.42□□□□□ -0.26
MMP28-207ENST00000619655 SMIM11BQ8TCY0 68 aa13.41□□□□□ -0.26
MMP28-207ENST00000619655 CSMD3Q7Z407 3707 aa13.4□□□□□ -0.26
MMP28-207ENST00000619655 RPL28P46779 137 aaKnown RBP13.39□□□□□ -0.27
MMP28-207ENST00000619655 DNHD1Q96M86 4753 aa13.39□□□□□ -0.27
MMP28-207ENST00000619655 NCR3O14931 201 aa13.39□□□□□ -0.27
MMP28-207ENST00000619655 Q8NDZ9 215 aa13.39□□□□□ -0.27
MMP28-207ENST00000619655 Q6ZRU5 148 aa13.38□□□□□ -0.27
MMP28-207ENST00000619655 XAGE1AQ9HD64 81 aa13.37□□□□□ -0.27
MMP28-207ENST00000619655 GVQW2A0A096LPI5 108 aaPredicted RBP13.36□□□□□ -0.27
MMP28-207ENST00000619655 FAM218AQ96MZ4 157 aa13.36□□□□□ -0.27
MMP28-207ENST00000619655 SNCGO76070 127 aa13.36□□□□□ -0.27
MMP28-207ENST00000619655 TEX49A0A1B0GTD5 131 aa13.35□□□□□ -0.27
MMP28-207ENST00000619655 NDUFC2O95298 119 aa13.35□□□□□ -0.27
MMP28-207ENST00000619655 TENM2Q9NT68 2774 aa13.34□□□□□ -0.27
MMP28-207ENST00000619655 PRKDCP78527 4128 aaKnown RBP13.34□□□□□ -0.27
MMP28-207ENST00000619655 GAGE2BQ13066 116 aa13.34□□□□□ -0.27
MMP28-207ENST00000619655 GAGE2EQ4V326 116 aa13.34□□□□□ -0.27
MMP28-207ENST00000619655 CASC10Q5T4H9 136 aa13.34□□□□□ -0.27
MMP28-207ENST00000619655 UPK3BQ9BT76 320 aa13.34□□□□□ -0.27
MMP28-207ENST00000619655 GAGE2DQ9UEU5 116 aa13.34□□□□□ -0.27
MMP28-207ENST00000619655 DNAH1Q9P2D7 4330 aa13.34□□□□□ -0.27
MMP28-207ENST00000619655 MEGF8Q7Z7M0 2845 aa13.33□□□□□ -0.28
MMP28-207ENST00000619655 H3BT86 120 aa13.33□□□□□ -0.28
MMP28-207ENST00000619655 UBE2DNLQ8IWF7 75 aa13.32□□□□□ -0.28
MMP28-207ENST00000619655 DNAH7Q8WXX0 4024 aa13.32□□□□□ -0.28
MMP28-207ENST00000619655 S100A7L2Q5SY68 101 aa13.31□□□□□ -0.28
MMP28-207ENST00000619655 Q6Q795 121 aa13.31□□□□□ -0.28
MMP28-207ENST00000619655 MUC7Q8TAX7 377 aa13.31□□□□□ -0.28
MMP28-207ENST00000619655 C2orf48Q96LS8 159 aa13.31□□□□□ -0.28
MMP28-207ENST00000619655 LECT2O14960 151 aa13.3□□□□□ -0.28
MMP28-207ENST00000619655 TMEM126AQ9H061 195 aa13.3□□□□□ -0.28
MMP28-207ENST00000619655 A0A087WYN8 130 aa13.29□□□□□ -0.28
MMP28-207ENST00000619655 NHLRC4P0CG21 123 aaPredicted RBP13.29□□□□□ -0.28
MMP28-207ENST00000619655 RPL18AQ02543 176 aaKnown RBP13.29□□□□□ -0.28
MMP28-207ENST00000619655 APLNQ9ULZ1 77 aa13.29□□□□□ -0.28
MMP28-207ENST00000619655 NDUFV3P56181 108 aaKnown RBP13.29□□□□□ -0.28
MMP28-207ENST00000619655 SYCNQ0VAF6 134 aa13.28□□□□□ -0.28
MMP28-207ENST00000619655 USP17L23D6RBM5 183 aa13.28□□□□□ -0.28
MMP28-207ENST00000619655 RMI2Q96E14 147 aa13.27□□□□□ -0.28
MMP28-207ENST00000619655 TRACP01848 142 aa13.27□□□□□ -0.29
MMP28-207ENST00000619655 NDUFC2-KCTD14E9PQ53 114 aa13.26□□□□□ -0.29
MMP28-207ENST00000619655 TTC32Q5I0X7 151 aa13.26□□□□□ -0.29
MMP28-207ENST00000619655 H0YGX0 51 aa13.25□□□□□ -0.29
MMP28-207ENST00000619655 KRTAP1-5Q9BYS1 174 aa13.25□□□□□ -0.29
MMP28-207ENST00000619655 SS18L2Q9UHA2 77 aa13.25□□□□□ -0.29
MMP28-207ENST00000619655 DYNC2H1Q8NCM8 4307 aaKnown RBP13.25□□□□□ -0.29
MMP28-207ENST00000619655 Q6ZRP5 223 aa13.24□□□□□ -0.29
MMP28-207ENST00000619655 DNAH10Q8IVF4 4471 aa13.24□□□□□ -0.29
MMP28-207ENST00000619655 DNAL4O96015 105 aa13.24□□□□□ -0.29
MMP28-207ENST00000619655 B5MCH6 92 aa13.23□□□□□ -0.29
MMP28-207ENST00000619655 PLECQ15149 4684 aaKnown RBP13.23□□□□□ -0.29
MMP28-207ENST00000619655 BAALC-AS2P0C853 105 aa13.22□□□□□ -0.29
MMP28-207ENST00000619655 C6orf99Q4VX62 202 aa13.22□□□□□ -0.29
MMP28-207ENST00000619655 FAM240AA0A1B0GVK7 77 aa13.21□□□□□ -0.29
MMP28-207ENST00000619655 SLPIP03973 132 aa13.21□□□□□ -0.29
MMP28-207ENST00000619655 NUPR2A6NF83 97 aa13.2□□□□□ -0.3
MMP28-207ENST00000619655 TRBV10-3A0A0K0K1G6 114 aa13.19□□□□□ -0.3
MMP28-207ENST00000619655 F8WDY8 70 aa13.19□□□□□ -0.3
MMP28-207ENST00000619655 IGLV6-57P01721 117 aa13.18□□□□□ -0.3
MMP28-207ENST00000619655 VPREB1P12018 145 aa13.17□□□□□ -0.3
MMP28-207ENST00000619655 STARD9Q9P2P6 4700 aa13.17□□□□□ -0.3
MMP28-207ENST00000619655 PSCAO43653 123 aa13.17□□□□□ -0.3
MMP28-207ENST00000619655 CCDC179H3BU77 68 aa13.16□□□□□ -0.3
MMP28-207ENST00000619655 C9orf129Q5T035 196 aaKnown RBP13.16□□□□□ -0.3
MMP28-207ENST00000619655 TRAV23DV6A0A075B6W5 121 aa13.13□□□□□ -0.31
MMP28-207ENST00000619655 C22orf24Q9Y442 160 aa13.12□□□□□ -0.31
MMP28-207ENST00000619655 Q8N814 137 aa13.12□□□□□ -0.31
MMP28-207ENST00000619655 TRBV7-7A0A0K0K1E9 115 aa13.1□□□□□ -0.31
MMP28-207ENST00000619655 M0R378 163 aa13.1□□□□□ -0.31
MMP28-207ENST00000619655 SERTAD4-AS1Q5TG53 156 aa13.1□□□□□ -0.31
MMP28-207ENST00000619655 ORMDL1Q9P0S3 153 aa13.09□□□□□ -0.31
MMP28-207ENST00000619655 ZNF73O43830 326 aaPredicted RBP13.08□□□□□ -0.32
MMP28-207ENST00000619655 ACYP1P07311 99 aa13.08□□□□□ -0.32
MMP28-207ENST00000619655 TLX1NBP0CAT3 122 aa13.08□□□□□ -0.32
MMP28-207ENST00000619655 NKAPP1Q8N9T2 125 aa13.08□□□□□ -0.32
MMP28-207ENST00000619655 DIRC1Q969H9 104 aa13.08□□□□□ -0.32
MMP28-207ENST00000619655 FAM168BA1KXE4 195 aa13.07□□□□□ -0.32
MMP28-207ENST00000619655 LINC00575Q6W349 94 aa13.07□□□□□ -0.32
MMP28-207ENST00000619655 NBDYA0A0U1RRE5 68 aa13.06□□□□□ -0.32
MMP28-207ENST00000619655 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.05□□□□□ -0.32
MMP28-207ENST00000619655 A0A1B0GX51 115 aa13.05□□□□□ -0.32
MMP28-207ENST00000619655 hADV29S1A0JD25 119 aa13.04□□□□□ -0.32
MMP28-207ENST00000619655 M0R2N4 97 aa13.04□□□□□ -0.32
MMP28-207ENST00000619655 IMUPQ9GZP8 106 aa13.04□□□□□ -0.32
MMP28-207ENST00000619655 LINC00167Q96N53 147 aa13.02□□□□□ -0.32
MMP28-207ENST00000619655 LOC107984640A0A0U1RRK4 108 aa13.02□□□□□ -0.33
MMP28-207ENST00000619655 FBN3Q75N90 2809 aa13.02□□□□□ -0.33
MMP28-207ENST00000619655 C7orf33Q8WU49 177 aa13.01□□□□□ -0.33
MMP28-207ENST00000619655 COX7BP24311 80 aa13.01□□□□□ -0.33
MMP28-207ENST00000619655 FAM19A5Q7Z5A7 132 aaPredicted RBP13□□□□□ -0.33
MMP28-207ENST00000619655 RPL37AP8A6NKH3 93 aa13□□□□□ -0.33
MMP28-207ENST00000619655 C14orf132Q9NPU4 83 aa13□□□□□ -0.33
MMP28-207ENST00000619655 INAFM2P0DMQ5 153 aa12.99□□□□□ -0.33
MMP28-207ENST00000619655 TGP01266 2768 aa12.98□□□□□ -0.33
MMP28-207ENST00000619655 ELOF1P60002 83 aaKnown RBP12.98□□□□□ -0.33
MMP28-207ENST00000619655 IGKV2-24A0A0C4DH68 120 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms