RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 HSPB8Q9UJY1 196 aa6.76□□□□□ -1.33
TARDBP-221ENST00000619555 C9orf129Q5T035 196 aaKnown RBP6.75□□□□□ -1.33
TARDBP-221ENST00000619555 H0Y9J4 135 aa6.74□□□□□ -1.33
TARDBP-221ENST00000619555 M0QXV9 152 aa6.73□□□□□ -1.33
TARDBP-221ENST00000619555 KRTAP1-4P0C5Y4 121 aa6.72□□□□□ -1.33
TARDBP-221ENST00000619555 UBE2BP63146 152 aa6.72□□□□□ -1.33
TARDBP-221ENST00000619555 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
TARDBP-221ENST00000619555 MAP1LC3CQ9BXW4 147 aa6.72□□□□□ -1.33
TARDBP-221ENST00000619555 XAGE1AQ9HD64 81 aa6.72□□□□□ -1.33
TARDBP-221ENST00000619555 SYS1-DBNDD2H3BUS1 97 aa6.71□□□□□ -1.34
TARDBP-221ENST00000619555 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.34
TARDBP-221ENST00000619555 IGLV1-50A0A075B6I6 118 aa6.7□□□□□ -1.34
TARDBP-221ENST00000619555 DPM2O94777 84 aa6.7□□□□□ -1.34
TARDBP-221ENST00000619555 IGKCP01834 107 aa6.7□□□□□ -1.34
TARDBP-221ENST00000619555 C3orf79P0CE67 100 aa6.7□□□□□ -1.34
TARDBP-221ENST00000619555 PLNP26678 52 aa6.7□□□□□ -1.34
TARDBP-221ENST00000619555 PFN2P35080 140 aa6.69□□□□□ -1.34
TARDBP-221ENST00000619555 ERG28Q9UKR5 140 aa6.69□□□□□ -1.34
TARDBP-221ENST00000619555 LINC01545Q5VT33 79 aa6.68□□□□□ -1.34
TARDBP-221ENST00000619555 LEPROTO15243 131 aa6.67□□□□□ -1.34
TARDBP-221ENST00000619555 GHRHP01286 108 aa6.67□□□□□ -1.34
TARDBP-221ENST00000619555 HIST3H2BBQ8N257 126 aa6.67□□□□□ -1.34
TARDBP-221ENST00000619555 C22orf24Q9Y442 160 aa6.67□□□□□ -1.34
TARDBP-221ENST00000619555 MUC2Q02817 5179 aa6.66□□□□□ -1.34
TARDBP-221ENST00000619555 KRTDAPP60985 99 aa6.66□□□□□ -1.34
TARDBP-221ENST00000619555 PET117Q6UWS5 81 aa6.66□□□□□ -1.34
TARDBP-221ENST00000619555 Q8NDZ9 215 aa6.66□□□□□ -1.34
TARDBP-221ENST00000619555 SND1-IT1Q9HBX3 110 aa6.66□□□□□ -1.34
TARDBP-221ENST00000619555 NDUFA12Q9UI09 145 aa6.66□□□□□ -1.34
TARDBP-221ENST00000619555 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
TARDBP-221ENST00000619555 J3QQQ9 107 aa6.65□□□□□ -1.34
TARDBP-221ENST00000619555 ZNF861PO60384 105 aa6.65□□□□□ -1.34
TARDBP-221ENST00000619555 COX17Q14061 63 aa6.65□□□□□ -1.34
TARDBP-221ENST00000619555 SFTA2Q6UW10 78 aa6.65□□□□□ -1.34
TARDBP-221ENST00000619555 E9PLD3 99 aa6.64□□□□□ -1.35
TARDBP-221ENST00000619555 SMIM13P0DJ93 91 aa6.64□□□□□ -1.35
TARDBP-221ENST00000619555 RPL13AP40429 203 aaKnown RBP6.64□□□□□ -1.35
TARDBP-221ENST00000619555 HERVK_113P61574 105 aa6.64□□□□□ -1.35
TARDBP-221ENST00000619555 PRR4Q16378 134 aa6.64□□□□□ -1.35
TARDBP-221ENST00000619555 PLEKHB2Q96CS7 222 aa6.64□□□□□ -1.35
TARDBP-221ENST00000619555 HIST1H2BLQ99880 126 aa6.64□□□□□ -1.35
TARDBP-221ENST00000619555 IGLV5-37A0A075B6J1 123 aa6.63□□□□□ -1.35
TARDBP-221ENST00000619555 LINC00158P58513 81 aa6.63□□□□□ -1.35
TARDBP-221ENST00000619555 LBHQ53QV2 105 aaPredicted RBP6.63□□□□□ -1.35
TARDBP-221ENST00000619555 IGKV2D-26A0A0A0MRZ7 120 aa6.62□□□□□ -1.35
TARDBP-221ENST00000619555 MYMXA0A1B0GTQ4 84 aa6.62□□□□□ -1.35
TARDBP-221ENST00000619555 VPREB1P12018 145 aa6.62□□□□□ -1.35
TARDBP-221ENST00000619555 HERV-K104P63124 156 aa6.62□□□□□ -1.35
TARDBP-221ENST00000619555 MEIG1Q5JSS6 88 aa6.62□□□□□ -1.35
TARDBP-221ENST00000619555 MRPL55Q7Z7F7 128 aaKnown RBP6.62□□□□□ -1.35
TARDBP-221ENST00000619555 TP73-AS1Q9UF72 201 aa6.62□□□□□ -1.35
TARDBP-221ENST00000619555 TSPAN13O95857 204 aa6.61□□□□□ -1.35
TARDBP-221ENST00000619555 LGALS3P17931 250 aaKnown RBP6.61□□□□□ -1.35
TARDBP-221ENST00000619555 SNRPEP62304 92 aaKnown RBP6.61□□□□□ -1.35
TARDBP-221ENST00000619555 ATOH7Q8N100 152 aa6.61□□□□□ -1.35
TARDBP-221ENST00000619555 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
TARDBP-221ENST00000619555 LINC00167Q96N53 147 aa6.61□□□□□ -1.35
TARDBP-221ENST00000619555 TTTY13Q9BZ97 58 aa6.61□□□□□ -1.35
TARDBP-221ENST00000619555 GAGE10A6NGK3 116 aa6.6□□□□□ -1.35
TARDBP-221ENST00000619555 C5orf52A6NGY3 159 aa6.6□□□□□ -1.35
TARDBP-221ENST00000619555 RPL37AP8A6NKH3 93 aa6.6□□□□□ -1.35
TARDBP-221ENST00000619555 S100A6P06703 90 aa6.6□□□□□ -1.35
TARDBP-221ENST00000619555 DAND5Q8N907 189 aa6.6□□□□□ -1.35
TARDBP-221ENST00000619555 A0A087X002 238 aa6.59□□□□□ -1.35
TARDBP-221ENST00000619555 BCE1O60756 84 aa6.59□□□□□ -1.35
TARDBP-221ENST00000619555 S100A2P29034 98 aa6.59□□□□□ -1.35
TARDBP-221ENST00000619555 RPL28P46779 137 aaKnown RBP6.59□□□□□ -1.35
TARDBP-221ENST00000619555 NMUP48645 174 aa6.59□□□□□ -1.35
TARDBP-221ENST00000619555 ANKRD39Q53RE8 183 aa6.59□□□□□ -1.35
TARDBP-221ENST00000619555 A0A0J9YXY3 114 aa6.58□□□□□ -1.36
TARDBP-221ENST00000619555 NKAPP1Q8N9T2 125 aa6.58□□□□□ -1.36
TARDBP-221ENST00000619555 FAT4Q6V0I7 4981 aa6.58□□□□□ -1.36
TARDBP-221ENST00000619555 MUC17Q685J3 4493 aa6.57□□□□□ -1.36
TARDBP-221ENST00000619555 C20orf202A1L168 122 aa6.57□□□□□ -1.36
TARDBP-221ENST00000619555 EIF4EBP3O60516 100 aaPredicted RBP6.57□□□□□ -1.36
TARDBP-221ENST00000619555 ADAMTSL4-AS1Q5T5F5 129 aa6.57□□□□□ -1.36
TARDBP-221ENST00000619555 LITAFQ99732 161 aa6.57□□□□□ -1.36
TARDBP-221ENST00000619555 ANAPC11Q9NYG5 84 aa6.57□□□□□ -1.36
TARDBP-221ENST00000619555 IGKV2-28A0A075B6P5 120 aa6.56□□□□□ -1.36
TARDBP-221ENST00000619555 LINC00587B1AMM8 73 aa6.56□□□□□ -1.36
TARDBP-221ENST00000619555 IGKV2D-28P01615 120 aa6.56□□□□□ -1.36
TARDBP-221ENST00000619555 CRYGAP11844 174 aa6.56□□□□□ -1.36
TARDBP-221ENST00000619555 SOSTDC1Q6X4U4 206 aa6.56□□□□□ -1.36
TARDBP-221ENST00000619555 TYMSOSQ8TAI1 123 aa6.56□□□□□ -1.36
TARDBP-221ENST00000619555 LOC107984156A0A0G2JMH3 177 aa6.55□□□□□ -1.36
TARDBP-221ENST00000619555 ZNF815PA8K554 130 aa6.55□□□□□ -1.36
TARDBP-221ENST00000619555 NCR3O14931 201 aa6.55□□□□□ -1.36
TARDBP-221ENST00000619555 RPL24P83731 157 aaKnown RBP6.55□□□□□ -1.36
TARDBP-221ENST00000619555 ARL17AQ8IVW1 177 aa6.55□□□□□ -1.36
TARDBP-221ENST00000619555 BOD1L2Q8IYS8 172 aa6.55□□□□□ -1.36
TARDBP-221ENST00000619555 TMEM238C9JI98 176 aa6.54□□□□□ -1.36
TARDBP-221ENST00000619555 NPC2P61916 151 aa6.54□□□□□ -1.36
TARDBP-221ENST00000619555 KRTAP13-1Q8IUC0 172 aa6.54□□□□□ -1.36
TARDBP-221ENST00000619555 UBE2AP49459 152 aa6.53□□□□□ -1.36
TARDBP-221ENST00000619555 KRTAP13-2Q52LG2 175 aa6.53□□□□□ -1.36
TARDBP-221ENST00000619555 PCP2Q8IVA1 136 aa6.53□□□□□ -1.36
TARDBP-221ENST00000619555 M0R378 163 aa6.52□□□□□ -1.37
TARDBP-221ENST00000619555 TIMM17BO60830 172 aa6.51□□□□□ -1.37
TARDBP-221ENST00000619555 TMEM126AQ9H061 195 aa6.51□□□□□ -1.37
TARDBP-221ENST00000619555 AKR1D1P51857 326 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms