RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	CDIP1	Q9H305	208 aa		4.93	□□□□□ -1.62
PCDH15-231	ENST00000617271	ZNF861P	O60384	105 aa		4.93	□□□□□ -1.62
PCDH15-231	ENST00000617271	DSCAML1	Q8TD84	2053 aa		4.92	□□□□□ -1.62
PCDH15-231	ENST00000617271		K7EIL1	84 aa		4.92	□□□□□ -1.62
PCDH15-231	ENST00000617271	COL27A1	Q8IZC6	1860 aa	Predicted RBP	4.92	□□□□□ -1.62
PCDH15-231	ENST00000617271	MUC6	Q6W4X9	2439 aa		4.91	□□□□□ -1.62
PCDH15-231	ENST00000617271	C8orf17	Q9NRJ1	99 aa		4.91	□□□□□ -1.62
PCDH15-231	ENST00000617271	TLX1NB	P0CAT3	122 aa		4.91	□□□□□ -1.62
PCDH15-231	ENST00000617271	RPS28	P62857	69 aa	Known RBP	4.91	□□□□□ -1.62
PCDH15-231	ENST00000617271	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
PCDH15-231	ENST00000617271	SERTAD4-AS1	Q5TG53	156 aa		4.91	□□□□□ -1.62
PCDH15-231	ENST00000617271	CYP4F30P	Q9H0H9	118 aa		4.91	□□□□□ -1.62
PCDH15-231	ENST00000617271		A0A087WTM6	91 aa		4.9	□□□□□ -1.62
PCDH15-231	ENST00000617271	DSCR10	P59022	87 aa		4.9	□□□□□ -1.62
PCDH15-231	ENST00000617271	KRTAP10-11	P60412	298 aa		4.9	□□□□□ -1.62
PCDH15-231	ENST00000617271	RIF1	Q5UIP0	2472 aa	Known RBP	4.9	□□□□□ -1.63
PCDH15-231	ENST00000617271		A0A1B0GVX0	72 aa		4.9	□□□□□ -1.63
PCDH15-231	ENST00000617271	FAM168B	A1KXE4	195 aa		4.9	□□□□□ -1.63
PCDH15-231	ENST00000617271	CRIPT	Q9P021	101 aa		4.9	□□□□□ -1.63
PCDH15-231	ENST00000617271	GVINP1	Q7Z2Y8	2422 aa		4.9	□□□□□ -1.63
PCDH15-231	ENST00000617271	CACNA1G	O43497	2377 aa		4.89	□□□□□ -1.63
PCDH15-231	ENST00000617271	SPTAN1	Q13813	2472 aa	Known RBP	4.89	□□□□□ -1.63
PCDH15-231	ENST00000617271	UQCR11	O14957	56 aa		4.89	□□□□□ -1.63
PCDH15-231	ENST00000617271	COA5	Q86WW8	74 aa		4.89	□□□□□ -1.63
PCDH15-231	ENST00000617271	LINC01600	Q96MT4	127 aa		4.89	□□□□□ -1.63
PCDH15-231	ENST00000617271	CSNK1G2-AS1	Q8NCQ2	148 aa		4.89	□□□□□ -1.63
PCDH15-231	ENST00000617271	PTPRB	P23467	1997 aa		4.89	□□□□□ -1.63
PCDH15-231	ENST00000617271	IGLV5-37	A0A075B6J1	123 aa		4.88	□□□□□ -1.63
PCDH15-231	ENST00000617271	PCNX1	Q96RV3	2341 aa		4.88	□□□□□ -1.63
PCDH15-231	ENST00000617271	IGFL1	Q6UW32	110 aa		4.88	□□□□□ -1.63
PCDH15-231	ENST00000617271	IGLV7-43	P04211	117 aa		4.88	□□□□□ -1.63
PCDH15-231	ENST00000617271	APLN	Q9ULZ1	77 aa		4.88	□□□□□ -1.63
PCDH15-231	ENST00000617271	DOPEY2	Q9Y3R5	2298 aa		4.88	□□□□□ -1.63
PCDH15-231	ENST00000617271	TM2D3	Q9BRN9	247 aa		4.88	□□□□□ -1.63
PCDH15-231	ENST00000617271		K7EQZ3	153 aa		4.87	□□□□□ -1.63
PCDH15-231	ENST00000617271	C9orf163	Q8N9P6	203 aa		4.87	□□□□□ -1.63
PCDH15-231	ENST00000617271	LINC00528	Q8N1L1	170 aa		4.87	□□□□□ -1.63
PCDH15-231	ENST00000617271	PRR15	Q8IV56	129 aa		4.87	□□□□□ -1.63
PCDH15-231	ENST00000617271	PRR34	Q9NV39	138 aa		4.87	□□□□□ -1.63
PCDH15-231	ENST00000617271	OBSCN-AS1	Q96MR7	158 aa		4.87	□□□□□ -1.63
PCDH15-231	ENST00000617271	IGLV8-61	A0A075B6I0	122 aa		4.86	□□□□□ -1.63
PCDH15-231	ENST00000617271	C9orf92	A6NGG3	77 aa		4.86	□□□□□ -1.63
PCDH15-231	ENST00000617271	C15orf56	Q8N910	161 aa		4.86	□□□□□ -1.63
PCDH15-231	ENST00000617271	CACNA1H	O95180	2353 aa		4.86	□□□□□ -1.63
PCDH15-231	ENST00000617271	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.86	□□□□□ -1.63
PCDH15-231	ENST00000617271	SMCP	P49901	116 aa	Predicted RBP	4.86	□□□□□ -1.63
PCDH15-231	ENST00000617271	LITAF	Q99732	161 aa		4.86	□□□□□ -1.63
PCDH15-231	ENST00000617271	AGRN	O00468	2067 aa		4.85	□□□□□ -1.63
PCDH15-231	ENST00000617271	LINC00612	Q8N6U2	182 aa		4.85	□□□□□ -1.63
PCDH15-231	ENST00000617271	PRO0461	Q9UI25	63 aa		4.85	□□□□□ -1.63
PCDH15-231	ENST00000617271	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.85	□□□□□ -1.63
PCDH15-231	ENST00000617271	TNC	P24821	2201 aa		4.84	□□□□□ -1.63
PCDH15-231	ENST00000617271	CNBP	P62633	177 aa	Known RBP	4.84	□□□□□ -1.63
PCDH15-231	ENST00000617271	PTPRQ	Q9UMZ3	2332 aa		4.84	□□□□□ -1.63
PCDH15-231	ENST00000617271	MIR22HG	Q0VDD5	57 aa		4.84	□□□□□ -1.63
PCDH15-231	ENST00000617271	ZNF575	Q86XF7	245 aa		4.83	□□□□□ -1.64
PCDH15-231	ENST00000617271	PRRC2A	P48634	2157 aa	Known RBP	4.83	□□□□□ -1.64
PCDH15-231	ENST00000617271	PRR14L	Q5THK1	2151 aa		4.83	□□□□□ -1.64
PCDH15-231	ENST00000617271	FAM208B	Q5VWN6	2430 aa		4.83	□□□□□ -1.64
PCDH15-231	ENST00000617271	C9orf129	Q5T035	196 aa	Known RBP	4.83	□□□□□ -1.64
PCDH15-231	ENST00000617271	SPRR4	Q96PI1	79 aa		4.82	□□□□□ -1.64
PCDH15-231	ENST00000617271	CD164	Q04900	197 aa		4.81	□□□□□ -1.64
PCDH15-231	ENST00000617271		A0A096LNT2	108 aa		4.8	□□□□□ -1.64
PCDH15-231	ENST00000617271	CREBBP	Q92793	2442 aa		4.8	□□□□□ -1.64
PCDH15-231	ENST00000617271	KRTAP10-3	P60369	221 aa		4.8	□□□□□ -1.64
PCDH15-231	ENST00000617271	SMR3B	P02814	79 aa	Predicted RBP	4.8	□□□□□ -1.64
PCDH15-231	ENST00000617271	OTOGL	Q3ZCN5	2332 aa		4.8	□□□□□ -1.64
PCDH15-231	ENST00000617271	C4orf26	Q17RF5	130 aa		4.79	□□□□□ -1.64
PCDH15-231	ENST00000617271	CDC42SE1	Q9NRR8	79 aa		4.79	□□□□□ -1.64
PCDH15-231	ENST00000617271	PSORS1C2	Q9UIG4	136 aa		4.79	□□□□□ -1.64
PCDH15-231	ENST00000617271	PLCE1	Q9P212	2302 aa		4.79	□□□□□ -1.64
PCDH15-231	ENST00000617271		Q8N377	158 aa		4.79	□□□□□ -1.64
PCDH15-231	ENST00000617271		Q6ZSA8	131 aa		4.78	□□□□□ -1.64
PCDH15-231	ENST00000617271	FAM104A	Q969W3	186 aa		4.77	□□□□□ -1.65
PCDH15-231	ENST00000617271	ARHGAP32	A7KAX9	2087 aa		4.77	□□□□□ -1.65
PCDH15-231	ENST00000617271	SPANXA2-OT1	Q8N9U9	137 aa		4.76	□□□□□ -1.65
PCDH15-231	ENST00000617271	NOTCH3	Q9UM47	2321 aa		4.76	□□□□□ -1.65
PCDH15-231	ENST00000617271	PCSK5	Q92824	1860 aa		4.76	□□□□□ -1.65
PCDH15-231	ENST00000617271		A0A1W2PNN7	141 aa		4.75	□□□□□ -1.65
PCDH15-231	ENST00000617271		A8MUN3	132 aa		4.75	□□□□□ -1.65
PCDH15-231	ENST00000617271	LINC00483	Q53H64	154 aa		4.75	□□□□□ -1.65
PCDH15-231	ENST00000617271	NAV3	Q8IVL0	2385 aa		4.75	□□□□□ -1.65
PCDH15-231	ENST00000617271	GIG44	P09565	113 aa	Predicted RBP	4.74	□□□□□ -1.65
PCDH15-231	ENST00000617271	KLKP1	Q107X0	134 aa		4.74	□□□□□ -1.65
PCDH15-231	ENST00000617271	FAM229B	Q4G0N7	80 aa		4.74	□□□□□ -1.65
PCDH15-231	ENST00000617271	NBAS	A2RRP1	2371 aa		4.73	□□□□□ -1.65
PCDH15-231	ENST00000617271	MED13L	Q71F56	2210 aa		4.73	□□□□□ -1.65
PCDH15-231	ENST00000617271	IGLV5-48	A0A075B6I7	105 aa		4.73	□□□□□ -1.65
PCDH15-231	ENST00000617271	IGLV7-46	A0A075B6I9	117 aa		4.73	□□□□□ -1.65
PCDH15-231	ENST00000617271	HRES1	P13985	223 aa		4.73	□□□□□ -1.65
PCDH15-231	ENST00000617271	LINC01554	Q52M75	96 aa		4.72	□□□□□ -1.65
PCDH15-231	ENST00000617271	ANAPC11	Q9NYG5	84 aa		4.71	□□□□□ -1.66
PCDH15-231	ENST00000617271	SORL1	Q92673	2214 aa		4.7	□□□□□ -1.66
PCDH15-231	ENST00000617271	PLXNB1	O43157	2135 aa		4.7	□□□□□ -1.66
PCDH15-231	ENST00000617271		M0R2T5	61 aa		4.7	□□□□□ -1.66
PCDH15-231	ENST00000617271	CASC10	Q5T4H9	136 aa		4.7	□□□□□ -1.66
PCDH15-231	ENST00000617271	KRTAP1-3	Q8IUG1	177 aa		4.7	□□□□□ -1.66
PCDH15-231	ENST00000617271		A0A0D9SG42	100 aa		4.69	□□□□□ -1.66
PCDH15-231	ENST00000617271		Q8N1X5	172 aa		4.69	□□□□□ -1.66
PCDH15-231	ENST00000617271	WNK1	Q9H4A3	2382 aa		4.69	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 176 ms