RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 NDUFA6P56556 154 aa6.14□□□□□ -1.43
PDLIM2-219ENST00000616289 RPL24P83731 157 aaKnown RBP6.14□□□□□ -1.43
PDLIM2-219ENST00000616289 LINC00518Q8N0U6 118 aa6.14□□□□□ -1.43
PDLIM2-219ENST00000616289 PLEKHB2Q96CS7 222 aa6.14□□□□□ -1.43
PDLIM2-219ENST00000616289 FABP9Q0Z7S8 132 aa6.13□□□□□ -1.43
PDLIM2-219ENST00000616289 COX17Q14061 63 aa6.13□□□□□ -1.43
PDLIM2-219ENST00000616289 C10orf91Q5T1B1 145 aa6.13□□□□□ -1.43
PDLIM2-219ENST00000616289 URB1-AS1Q96HZ7 61 aa6.13□□□□□ -1.43
PDLIM2-219ENST00000616289 COX19Q49B96 90 aa6.12□□□□□ -1.43
PDLIM2-219ENST00000616289 CBLN2Q8IUK8 224 aa6.12□□□□□ -1.43
PDLIM2-219ENST00000616289 HIGD2AQ9BW72 106 aa6.12□□□□□ -1.43
PDLIM2-219ENST00000616289 SEC11CQ9BY50 192 aa6.12□□□□□ -1.43
PDLIM2-219ENST00000616289 C11orf86A6NJI1 115 aa6.11□□□□□ -1.43
PDLIM2-219ENST00000616289 PMCHL1Q16048 86 aa6.11□□□□□ -1.43
PDLIM2-219ENST00000616289 PPDPFQ9H3Y8 114 aa6.11□□□□□ -1.43
PDLIM2-219ENST00000616289 HBDP02042 147 aa6.1□□□□□ -1.43
PDLIM2-219ENST00000616289 TMEM170BQ5T4T1 132 aa6.1□□□□□ -1.43
PDLIM2-219ENST00000616289 SFTA2Q6UW10 78 aa6.1□□□□□ -1.43
PDLIM2-219ENST00000616289 C18orf32Q8TCD1 76 aa6.1□□□□□ -1.43
PDLIM2-219ENST00000616289 SPRR4Q96PI1 79 aa6.1□□□□□ -1.43
PDLIM2-219ENST00000616289 LINC00614P0C842 121 aa6.09□□□□□ -1.43
PDLIM2-219ENST00000616289 BAGE3Q86Y29 109 aa6.09□□□□□ -1.43
PDLIM2-219ENST00000616289 SVBPQ8N300 66 aa6.09□□□□□ -1.43
PDLIM2-219ENST00000616289 A0A0U1RRA0 63 aa6.08□□□□□ -1.44
PDLIM2-219ENST00000616289 S100A6P06703 90 aa6.08□□□□□ -1.44
PDLIM2-219ENST00000616289 LINC00158P58513 81 aa6.08□□□□□ -1.44
PDLIM2-219ENST00000616289 RPS10P5Q9NQ39 176 aa6.08□□□□□ -1.44
PDLIM2-219ENST00000616289 PCP4L1A6NKN8 68 aa6.07□□□□□ -1.44
PDLIM2-219ENST00000616289 APOC3P02656 99 aa6.07□□□□□ -1.44
PDLIM2-219ENST00000616289 RHEBQ15382 184 aa6.07□□□□□ -1.44
PDLIM2-219ENST00000616289 SPAG11AQ6PDA7 123 aa6.07□□□□□ -1.44
PDLIM2-219ENST00000616289 TRAPPC1Q9Y5R8 145 aa6.07□□□□□ -1.44
PDLIM2-219ENST00000616289 SNAPINO95295 136 aa6.06□□□□□ -1.44
PDLIM2-219ENST00000616289 FP248Q71RG6 208 aaPredicted RBP6.06□□□□□ -1.44
PDLIM2-219ENST00000616289 DAND5Q8N907 189 aa6.06□□□□□ -1.44
PDLIM2-219ENST00000616289 CHTOPQ9Y3Y2 248 aaKnown RBP6.06□□□□□ -1.44
PDLIM2-219ENST00000616289 ZNF706Q9Y5V0 76 aaPredicted RBP6.06□□□□□ -1.44
PDLIM2-219ENST00000616289 TMEM223A0PJW6 202 aa6.05□□□□□ -1.44
PDLIM2-219ENST00000616289 PRYO14603 147 aa6.05□□□□□ -1.44
PDLIM2-219ENST00000616289 NCR3O14931 201 aa6.05□□□□□ -1.44
PDLIM2-219ENST00000616289 SMIM13P0DJ93 91 aa6.05□□□□□ -1.44
PDLIM2-219ENST00000616289 Q8NBF4 154 aa6.05□□□□□ -1.44
PDLIM2-219ENST00000616289 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
PDLIM2-219ENST00000616289 SPRR1AP35321 89 aa6.04□□□□□ -1.44
PDLIM2-219ENST00000616289 KRTAP13-3Q3SY46 172 aa6.04□□□□□ -1.44
PDLIM2-219ENST00000616289 BOD1L2Q8IYS8 172 aa6.04□□□□□ -1.44
PDLIM2-219ENST00000616289 LINC00337Q8N6G1 96 aa6.04□□□□□ -1.44
PDLIM2-219ENST00000616289 C12orf57Q99622 126 aa6.04□□□□□ -1.44
PDLIM2-219ENST00000616289 KRTAP4-16G5E9R7 235 aaPredicted RBP6.03□□□□□ -1.44
PDLIM2-219ENST00000616289 SMIM6P0DI80 62 aa6.03□□□□□ -1.44
PDLIM2-219ENST00000616289 C4orf48Q5BLP8 95 aa6.03□□□□□ -1.44
PDLIM2-219ENST00000616289 MIR7-3HGQ8N6C7 128 aa6.03□□□□□ -1.44
PDLIM2-219ENST00000616289 SMCR5Q8TEV8 140 aa6.03□□□□□ -1.44
PDLIM2-219ENST00000616289 KCNQ1DNQ9H478 68 aa6.03□□□□□ -1.44
PDLIM2-219ENST00000616289 MEIG1Q5JSS6 88 aa6.02□□□□□ -1.45
PDLIM2-219ENST00000616289 TRAV12-1A0A0B4J245 112 aa6.01□□□□□ -1.45
PDLIM2-219ENST00000616289 ETDCA0A1B0GVM5 59 aa6.01□□□□□ -1.45
PDLIM2-219ENST00000616289 AKR1D1P51857 326 aa6.01□□□□□ -1.45
PDLIM2-219ENST00000616289 ASB16-AS1Q495Z4 193 aa6.01□□□□□ -1.45
PDLIM2-219ENST00000616289 LINC00483Q53H64 154 aa6.01□□□□□ -1.45
PDLIM2-219ENST00000616289 IFI27L1Q96BM0 104 aa6.01□□□□□ -1.45
PDLIM2-219ENST00000616289 TRBV10-3A0A0K0K1G6 114 aa6□□□□□ -1.45
PDLIM2-219ENST00000616289 SPINK1P00995 79 aa6□□□□□ -1.45
PDLIM2-219ENST00000616289 HERV-K104P63124 156 aa6□□□□□ -1.45
PDLIM2-219ENST00000616289 KRTAP4-1Q9BYQ7 146 aa6□□□□□ -1.45
PDLIM2-219ENST00000616289 MOBPQ13875 183 aa5.99□□□□□ -1.45
PDLIM2-219ENST00000616289 CHCHD1Q96BP2 118 aaKnown RBP5.99□□□□□ -1.45
PDLIM2-219ENST00000616289 NDUFA12Q9UI09 145 aa5.99□□□□□ -1.45
PDLIM2-219ENST00000616289 IGLV9-49A0A0B4J1Y8 123 aa5.98□□□□□ -1.45
PDLIM2-219ENST00000616289 B5MCH6 92 aa5.98□□□□□ -1.45
PDLIM2-219ENST00000616289 ERC2-IT1O76042 136 aa5.98□□□□□ -1.45
PDLIM2-219ENST00000616289 GAGE2AQ6NT46 116 aa5.98□□□□□ -1.45
PDLIM2-219ENST00000616289 TSPEAR-AS2P59090 65 aa5.97□□□□□ -1.45
PDLIM2-219ENST00000616289 Q8N377 158 aa5.97□□□□□ -1.45
PDLIM2-219ENST00000616289 Q9BRP9 147 aa5.97□□□□□ -1.45
PDLIM2-219ENST00000616289 MYMXA0A1B0GTQ4 84 aa5.96□□□□□ -1.46
PDLIM2-219ENST00000616289 COLCA2A8K830 154 aa5.96□□□□□ -1.46
PDLIM2-219ENST00000616289 LINC00587B1AMM8 73 aa5.96□□□□□ -1.46
PDLIM2-219ENST00000616289 DDTP30046 118 aa5.96□□□□□ -1.46
PDLIM2-219ENST00000616289 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.46
PDLIM2-219ENST00000616289 MAP1LC3CQ9BXW4 147 aa5.96□□□□□ -1.46
PDLIM2-219ENST00000616289 H0Y8G0 127 aa5.95□□□□□ -1.46
PDLIM2-219ENST00000616289 LINC01547P58512 204 aaPredicted RBP5.95□□□□□ -1.46
PDLIM2-219ENST00000616289 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
PDLIM2-219ENST00000616289 Q6ZRX8 168 aa5.95□□□□□ -1.46
PDLIM2-219ENST00000616289 FAM19A2Q8N3H0 131 aa5.95□□□□□ -1.46
PDLIM2-219ENST00000616289 YPEL4Q96NS1 127 aa5.95□□□□□ -1.46
PDLIM2-219ENST00000616289 LOC107984156A0A0G2JMH3 177 aa5.94□□□□□ -1.46
PDLIM2-219ENST00000616289 TRBV10-2A0A0K0K1G8 114 aa5.94□□□□□ -1.46
PDLIM2-219ENST00000616289 HSBP1O75506 76 aa5.94□□□□□ -1.46
PDLIM2-219ENST00000616289 SSBP3-AS1Q7Z2R9 100 aa5.94□□□□□ -1.46
PDLIM2-219ENST00000616289 ARL17AQ8IVW1 177 aa5.94□□□□□ -1.46
PDLIM2-219ENST00000616289 SPANXB1Q9NS25 103 aaPredicted RBP5.93□□□□□ -1.46
PDLIM2-219ENST00000616289 FSIP2Q5CZC0 6907 aa5.92□□□□□ -1.46
PDLIM2-219ENST00000616289 LEPROTO15243 131 aa5.92□□□□□ -1.46
PDLIM2-219ENST00000616289 SLC25A20O43772 301 aa5.92□□□□□ -1.46
PDLIM2-219ENST00000616289 XP32Q5T750 250 aa5.92□□□□□ -1.46
PDLIM2-219ENST00000616289 IGLV6-57P01721 117 aa5.91□□□□□ -1.46
PDLIM2-219ENST00000616289 LINC00310P59036 64 aa5.91□□□□□ -1.46
PDLIM2-219ENST00000616289 C9orf153Q5TBE3 101 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms