RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 Q8IZM0 81 aa3.96□□□□□ -1.78
SYNCRIP-204ENST00000616122 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
SYNCRIP-204ENST00000616122 IGHV4-30-4P0DP06 118 aa3.96□□□□□ -1.78
SYNCRIP-204ENST00000616122 C16orf95Q9H693 158 aa3.96□□□□□ -1.78
SYNCRIP-204ENST00000616122 ZNF706Q9Y5V0 76 aaPredicted RBP3.96□□□□□ -1.78
SYNCRIP-204ENST00000616122 X6R8D5 127 aa3.96□□□□□ -1.78
SYNCRIP-204ENST00000616122 GIG44P09565 113 aaPredicted RBP3.96□□□□□ -1.78
SYNCRIP-204ENST00000616122 REG3GQ6UW15 175 aa3.95□□□□□ -1.78
SYNCRIP-204ENST00000616122 Q6ZQY7 126 aa3.95□□□□□ -1.78
SYNCRIP-204ENST00000616122 SBSPONQ8IVN8 264 aa3.95□□□□□ -1.78
SYNCRIP-204ENST00000616122 CYSRT1A8MQ03 144 aa3.95□□□□□ -1.78
SYNCRIP-204ENST00000616122 TM2D3Q9BRN9 247 aa3.95□□□□□ -1.78
SYNCRIP-204ENST00000616122 C19orf73Q9NVV2 129 aa3.95□□□□□ -1.78
SYNCRIP-204ENST00000616122 PRR3P79522 188 aaKnown RBP3.95□□□□□ -1.78
SYNCRIP-204ENST00000616122 C9orf116Q5BN46 136 aaPredicted RBP3.94□□□□□ -1.78
SYNCRIP-204ENST00000616122 SMIM20Q8N5G0 67 aa3.94□□□□□ -1.78
SYNCRIP-204ENST00000616122 DEFB105AQ8NG35 78 aa3.94□□□□□ -1.78
SYNCRIP-204ENST00000616122 LELP1Q5T871 98 aa3.94□□□□□ -1.78
SYNCRIP-204ENST00000616122 KPRPQ5T749 579 aaPredicted RBP3.94□□□□□ -1.78
SYNCRIP-204ENST00000616122 TMEM256-PLSCR3K7ERE1 68 aa3.94□□□□□ -1.78
SYNCRIP-204ENST00000616122 WIPF1O43516 503 aa3.94□□□□□ -1.78
SYNCRIP-204ENST00000616122 A0A1B0GX51 115 aa3.93□□□□□ -1.78
SYNCRIP-204ENST00000616122 DSCR8Q96T75 97 aa3.93□□□□□ -1.78
SYNCRIP-204ENST00000616122 DIRC1Q969H9 104 aa3.93□□□□□ -1.78
SYNCRIP-204ENST00000616122 DMDP11532 3685 aa3.93□□□□□ -1.78
SYNCRIP-204ENST00000616122 DEFB131BA0A096LNP1 70 aa3.93□□□□□ -1.78
SYNCRIP-204ENST00000616122 NCR3O14931 201 aa3.93□□□□□ -1.78
SYNCRIP-204ENST00000616122 USP17L23D6RBM5 183 aa3.93□□□□□ -1.78
SYNCRIP-204ENST00000616122 SS18L2Q9UHA2 77 aa3.93□□□□□ -1.78
SYNCRIP-204ENST00000616122 KRTAP1-3Q8IUG1 177 aa3.92□□□□□ -1.78
SYNCRIP-204ENST00000616122 ATOX1O00244 68 aa3.92□□□□□ -1.78
SYNCRIP-204ENST00000616122 C11orf45Q8TAV5 145 aa3.92□□□□□ -1.78
SYNCRIP-204ENST00000616122 IMUPQ9GZP8 106 aa3.92□□□□□ -1.78
SYNCRIP-204ENST00000616122 M0QXV9 152 aa3.92□□□□□ -1.78
SYNCRIP-204ENST00000616122 SDIM1Q6ZPB5 146 aa3.92□□□□□ -1.78
SYNCRIP-204ENST00000616122 PRYO14603 147 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 SYCNQ0VAF6 134 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 PLAC8L1A1L4L8 177 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 PSCAO43653 123 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 FAM104AQ969W3 186 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 PDE6GP18545 87 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 Q6ZTC4 211 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 hADV29S1A0JD25 119 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 Q6Q795 121 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 SERP2Q8N6R1 65 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 TGP01266 2768 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 ZFHX4Q86UP3 3567 aa3.91□□□□□ -1.78
SYNCRIP-204ENST00000616122 COX7BP24311 80 aa3.9□□□□□ -1.78
SYNCRIP-204ENST00000616122 KRTAP1-1Q07627 177 aa3.9□□□□□ -1.78
SYNCRIP-204ENST00000616122 FAM218AQ96MZ4 157 aa3.9□□□□□ -1.78
SYNCRIP-204ENST00000616122 TRAV10A0A0B4J240 114 aa3.9□□□□□ -1.79
SYNCRIP-204ENST00000616122 ETDCA0A1B0GVM5 59 aa3.9□□□□□ -1.79
SYNCRIP-204ENST00000616122 RMI2Q96E14 147 aa3.9□□□□□ -1.79
SYNCRIP-204ENST00000616122 MUC7Q8TAX7 377 aa3.9□□□□□ -1.79
SYNCRIP-204ENST00000616122 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
SYNCRIP-204ENST00000616122 A0A087WYN8 130 aa3.9□□□□□ -1.79
SYNCRIP-204ENST00000616122 UBE2DNLQ8IWF7 75 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 IGKV2-28A0A075B6P5 120 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 IGKV2D-28P01615 120 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 TRBV10-3A0A0K0K1G6 114 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 F8WEM9 126 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 UQCRQO14949 82 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 A0A087WVE0 104 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 ZNF73O43830 326 aaPredicted RBP3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 EGFEM1PQ0D2K5 195 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 COX17Q14061 63 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 C10orf25Q5T742 122 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 LINC00846Q9NV44 126 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 Q8N3U1 123 aa3.89□□□□□ -1.79
SYNCRIP-204ENST00000616122 CUBNO60494 3623 aa3.88□□□□□ -1.79
SYNCRIP-204ENST00000616122 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
SYNCRIP-204ENST00000616122 TMEM254Q8TBM7 123 aa3.88□□□□□ -1.79
SYNCRIP-204ENST00000616122 CELA1Q9UNI1 258 aa3.88□□□□□ -1.79
SYNCRIP-204ENST00000616122 CCDC179H3BU77 68 aa3.88□□□□□ -1.79
SYNCRIP-204ENST00000616122 FUSP35637 526 aaKnown RBP eCLIP3.88□□□□□ -1.792e-6■□□□□ 9.8
SYNCRIP-204ENST00000616122 NREPQ16612 68 aa3.88□□□□□ -1.79
SYNCRIP-204ENST00000616122 WFDC10BQ8IUB3 73 aa3.88□□□□□ -1.79
SYNCRIP-204ENST00000616122 C6orf223Q8N319 242 aa3.88□□□□□ -1.79
SYNCRIP-204ENST00000616122 C8orf17Q9NRJ1 99 aa3.88□□□□□ -1.79
SYNCRIP-204ENST00000616122 LINC01561Q8N1V8 128 aa3.88□□□□□ -1.79
SYNCRIP-204ENST00000616122 KLK5Q9Y337 293 aaPredicted RBP3.88□□□□□ -1.79
SYNCRIP-204ENST00000616122 IGKV2-24A0A0C4DH68 120 aa3.87□□□□□ -1.79
SYNCRIP-204ENST00000616122 Q8N814 137 aa3.87□□□□□ -1.79
SYNCRIP-204ENST00000616122 IL17DQ8TAD2 202 aa3.87□□□□□ -1.79
SYNCRIP-204ENST00000616122 UBE2BP63146 152 aa3.87□□□□□ -1.79
SYNCRIP-204ENST00000616122 LYPD5Q6UWN5 251 aa3.87□□□□□ -1.79
SYNCRIP-204ENST00000616122 CCKP06307 115 aa3.87□□□□□ -1.79
SYNCRIP-204ENST00000616122 KIAA0087Q14695 138 aa3.87□□□□□ -1.79
SYNCRIP-204ENST00000616122 Q8NAQ8 132 aa3.86□□□□□ -1.79
SYNCRIP-204ENST00000616122 IGKV2D-30A0A075B6S6 120 aa3.86□□□□□ -1.79
SYNCRIP-204ENST00000616122 LINC00612Q8N6U2 182 aa3.86□□□□□ -1.79
SYNCRIP-204ENST00000616122 SMG1Q96Q15 3661 aaKnown RBP3.86□□□□□ -1.79
SYNCRIP-204ENST00000616122 A0A0J9YWU9 116 aa3.86□□□□□ -1.79
SYNCRIP-204ENST00000616122 ENHOQ6UWT2 76 aa3.86□□□□□ -1.79
SYNCRIP-204ENST00000616122 HIGD2AQ9BW72 106 aa3.86□□□□□ -1.79
SYNCRIP-204ENST00000616122 ATP5EP2Q5VTU8 51 aa3.86□□□□□ -1.79
SYNCRIP-204ENST00000616122 C3orf22Q8N5N4 141 aa3.86□□□□□ -1.79
SYNCRIP-204ENST00000616122 TRBV7-7A0A0K0K1E9 115 aa3.85□□□□□ -1.79
SYNCRIP-204ENST00000616122 M0R378 163 aa3.85□□□□□ -1.79
SYNCRIP-204ENST00000616122 FAM19A3Q7Z5A8 133 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms