RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 SCXQ7RTU7 201 aa6.72□□□□□ -1.33
LINC00649-217ENST00000616030 SPANXDQ9BXN6 97 aa6.72□□□□□ -1.33
LINC00649-217ENST00000616030 SPANXCQ9NY87 97 aa6.72□□□□□ -1.33
LINC00649-217ENST00000616030 ERG28Q9UKR5 140 aa6.72□□□□□ -1.33
LINC00649-217ENST00000616030 TRBV30A0A0K0K1B3 111 aa6.71□□□□□ -1.34
LINC00649-217ENST00000616030 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.34
LINC00649-217ENST00000616030 HAMPP81172 84 aa6.71□□□□□ -1.34
LINC00649-217ENST00000616030 HIGD2BQ4VC39 106 aa6.71□□□□□ -1.34
LINC00649-217ENST00000616030 C2orf82Q6UX34 121 aa6.71□□□□□ -1.34
LINC00649-217ENST00000616030 CEND1Q8N111 149 aa6.71□□□□□ -1.34
LINC00649-217ENST00000616030 CAMK2N2Q96S95 79 aa6.71□□□□□ -1.34
LINC00649-217ENST00000616030 LITAFQ99732 161 aa6.71□□□□□ -1.34
LINC00649-217ENST00000616030 SMIM13P0DJ93 91 aa6.7□□□□□ -1.34
LINC00649-217ENST00000616030 INAFM2P0DMQ5 153 aa6.7□□□□□ -1.34
LINC00649-217ENST00000616030 HINT1P49773 126 aaPredicted RBP6.7□□□□□ -1.34
LINC00649-217ENST00000616030 PTTG1IPP53801 180 aa6.7□□□□□ -1.34
LINC00649-217ENST00000616030 LINC00158P58513 81 aa6.7□□□□□ -1.34
LINC00649-217ENST00000616030 KRTAP10-4P60372 401 aaPredicted RBP6.7□□□□□ -1.34
LINC00649-217ENST00000616030 LINC01620Q4KN68 170 aa6.7□□□□□ -1.34
LINC00649-217ENST00000616030 BVES-AS1Q5T3Y7 98 aa6.7□□□□□ -1.34
LINC00649-217ENST00000616030 ADAMTSL4-AS1Q5T5F5 129 aa6.7□□□□□ -1.34
LINC00649-217ENST00000616030 UNQ6190/PRO20217Q6UXQ8 127 aa6.7□□□□□ -1.34
LINC00649-217ENST00000616030 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
LINC00649-217ENST00000616030 HERC1Q15751 4861 aa6.69□□□□□ -1.34
LINC00649-217ENST00000616030 RPL24P83731 157 aaKnown RBP6.69□□□□□ -1.34
LINC00649-217ENST00000616030 SYCNQ0VAF6 134 aa6.69□□□□□ -1.34
LINC00649-217ENST00000616030 RNF151Q2KHN1 245 aa6.69□□□□□ -1.34
LINC00649-217ENST00000616030 CIRBP-AS1Q8TBR5 109 aa6.69□□□□□ -1.34
LINC00649-217ENST00000616030 LINC00526Q96FQ7 95 aa6.69□□□□□ -1.34
LINC00649-217ENST00000616030 A0A0U1RRA0 63 aa6.68□□□□□ -1.34
LINC00649-217ENST00000616030 PLA2G1BP04054 148 aaKnown RBP6.68□□□□□ -1.34
LINC00649-217ENST00000616030 PFN2P35080 140 aa6.68□□□□□ -1.34
LINC00649-217ENST00000616030 BATFQ16520 125 aa6.68□□□□□ -1.34
LINC00649-217ENST00000616030 C10orf25Q5T742 122 aa6.68□□□□□ -1.34
LINC00649-217ENST00000616030 SDIM1Q6ZPB5 146 aa6.68□□□□□ -1.34
LINC00649-217ENST00000616030 MUSTN1Q8IVN3 82 aa6.68□□□□□ -1.34
LINC00649-217ENST00000616030 SNHG12Q9BXW3 62 aa6.68□□□□□ -1.34
LINC00649-217ENST00000616030 A6NDN8 102 aa6.67□□□□□ -1.34
LINC00649-217ENST00000616030 LBHQ53QV2 105 aaPredicted RBP6.67□□□□□ -1.34
LINC00649-217ENST00000616030 Q6ZRU5 148 aa6.67□□□□□ -1.34
LINC00649-217ENST00000616030 MIR7-3HGQ8N6C7 128 aa6.67□□□□□ -1.34
LINC00649-217ENST00000616030 LINC00308Q8TCZ7 52 aa6.67□□□□□ -1.34
LINC00649-217ENST00000616030 CARD19Q96LW7 228 aa6.67□□□□□ -1.34
LINC00649-217ENST00000616030 C6orf48Q9UBA6 75 aa6.67□□□□□ -1.34
LINC00649-217ENST00000616030 FLG2Q5D862 2391 aaPredicted RBP6.67□□□□□ -1.34
LINC00649-217ENST00000616030 DMBT1Q9UGM3 2413 aaPredicted RBP6.67□□□□□ -1.34
LINC00649-217ENST00000616030 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.66□□□□□ -1.34
LINC00649-217ENST00000616030 SLPIP03973 132 aa6.66□□□□□ -1.34
LINC00649-217ENST00000616030 FXYD2P54710 66 aa6.66□□□□□ -1.34
LINC00649-217ENST00000616030 PKHD1L1Q86WI1 4243 aa6.65□□□□□ -1.34
LINC00649-217ENST00000616030 LOC107984156A0A0G2JMH3 177 aa6.65□□□□□ -1.34
LINC00649-217ENST00000616030 C9orf116Q5BN46 136 aaPredicted RBP6.65□□□□□ -1.34
LINC00649-217ENST00000616030 COL5A1-AS1Q5SY13 56 aa6.65□□□□□ -1.34
LINC00649-217ENST00000616030 ARL17AQ8IVW1 177 aa6.65□□□□□ -1.34
LINC00649-217ENST00000616030 DAND5Q8N907 189 aa6.65□□□□□ -1.34
LINC00649-217ENST00000616030 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.65□□□□□ -1.34
LINC00649-217ENST00000616030 A4D1N5 150 aa6.64□□□□□ -1.35
LINC00649-217ENST00000616030 PANO1I0J062 215 aa6.64□□□□□ -1.35
LINC00649-217ENST00000616030 TLX1NBP0CAT3 122 aa6.64□□□□□ -1.35
LINC00649-217ENST00000616030 PKIGQ9Y2B9 76 aa6.64□□□□□ -1.35
LINC00649-217ENST00000616030 NDUFC2-KCTD14E9PQ53 114 aa6.63□□□□□ -1.35
LINC00649-217ENST00000616030 NPC2P61916 151 aa6.63□□□□□ -1.35
LINC00649-217ENST00000616030 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
LINC00649-217ENST00000616030 SPACA4Q8TDM5 124 aa6.63□□□□□ -1.35
LINC00649-217ENST00000616030 NHP2Q9NX24 153 aaKnown RBP6.63□□□□□ -1.35
LINC00649-217ENST00000616030 A0A1B0GWB2 263 aa6.62□□□□□ -1.35
LINC00649-217ENST00000616030 KRTAP29-1A8MX34 341 aaPredicted RBP6.62□□□□□ -1.35
LINC00649-217ENST00000616030 SOSTDC1Q6X4U4 206 aa6.62□□□□□ -1.35
LINC00649-217ENST00000616030 SND1-IT1Q9HBX3 110 aa6.62□□□□□ -1.35
LINC00649-217ENST00000616030 A0A0B4J2C4 111 aa6.61□□□□□ -1.35
LINC00649-217ENST00000616030 LOC107984640A0A0U1RRK4 108 aa6.61□□□□□ -1.35
LINC00649-217ENST00000616030 CFC1BP0CG36 223 aa6.61□□□□□ -1.35
LINC00649-217ENST00000616030 CFC1P0CG37 223 aa6.61□□□□□ -1.35
LINC00649-217ENST00000616030 RAB37Q96AX2 223 aa6.61□□□□□ -1.35
LINC00649-217ENST00000616030 LRP1Q07954 4544 aaKnown RBP6.6□□□□□ -1.35
LINC00649-217ENST00000616030 NDUFC2O95298 119 aa6.6□□□□□ -1.35
LINC00649-217ENST00000616030 PLAC8Q9NZF1 115 aa6.6□□□□□ -1.35
LINC00649-217ENST00000616030 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
LINC00649-217ENST00000616030 EIF4EBP3O60516 100 aaPredicted RBP6.59□□□□□ -1.35
LINC00649-217ENST00000616030 PRO1854Q9UHT4 67 aa6.59□□□□□ -1.35
LINC00649-217ENST00000616030 TRAV13-2A0A0B4J235 113 aa6.58□□□□□ -1.36
LINC00649-217ENST00000616030 RPL18AQ02543 176 aaKnown RBP6.58□□□□□ -1.36
LINC00649-217ENST00000616030 GAGE2EQ4V326 116 aa6.58□□□□□ -1.36
LINC00649-217ENST00000616030 Q6ZRP5 223 aa6.58□□□□□ -1.36
LINC00649-217ENST00000616030 GAGE2DQ9UEU5 116 aa6.58□□□□□ -1.36
LINC00649-217ENST00000616030 A0A087WYN8 130 aa6.57□□□□□ -1.36
LINC00649-217ENST00000616030 K7ERJ3 54 aa6.57□□□□□ -1.36
LINC00649-217ENST00000616030 TAX1BP3O14907 124 aa6.57□□□□□ -1.36
LINC00649-217ENST00000616030 RPL37AP61513 92 aaKnown RBP6.57□□□□□ -1.36
LINC00649-217ENST00000616030 XAGE1AQ9HD64 81 aa6.57□□□□□ -1.36
LINC00649-217ENST00000616030 LINC00474Q9P2X8 69 aa6.57□□□□□ -1.36
LINC00649-217ENST00000616030 TRBV10-2A0A0K0K1G8 114 aa6.56□□□□□ -1.36
LINC00649-217ENST00000616030 C9orf118A6NHY6 69 aa6.56□□□□□ -1.36
LINC00649-217ENST00000616030 OXTP01178 125 aa6.56□□□□□ -1.36
LINC00649-217ENST00000616030 CHTF8P0CG12 524 aa6.56□□□□□ -1.36
LINC00649-217ENST00000616030 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
LINC00649-217ENST00000616030 GAGE2BQ13066 116 aa6.56□□□□□ -1.36
LINC00649-217ENST00000616030 PLA2G2DQ9UNK4 145 aa6.56□□□□□ -1.36
LINC00649-217ENST00000616030 IGKV2-28A0A075B6P5 120 aa6.55□□□□□ -1.36
LINC00649-217ENST00000616030 IGKV2D-28P01615 120 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms