RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 IGHV3OR16-9A0A0B4J2B5 98 aa7.22□□□□□ -1.25
TNFAIP3-208ENST00000615468 ZNF561-AS1K7EIQ3 104 aa7.22□□□□□ -1.25
TNFAIP3-208ENST00000615468 PMAIP1Q13794 54 aa7.22□□□□□ -1.25
TNFAIP3-208ENST00000615468 ESRGQ1W209 222 aa7.22□□□□□ -1.25
TNFAIP3-208ENST00000615468 FAM19A3Q7Z5A8 133 aa7.22□□□□□ -1.25
TNFAIP3-208ENST00000615468 A0A096LNT2 108 aa7.21□□□□□ -1.26
TNFAIP3-208ENST00000615468 C9orf116Q5BN46 136 aaPredicted RBP7.2□□□□□ -1.26
TNFAIP3-208ENST00000615468 SMR3AQ99954 134 aa7.2□□□□□ -1.26
TNFAIP3-208ENST00000615468 MAP6D1Q9H9H5 199 aa7.2□□□□□ -1.26
TNFAIP3-208ENST00000615468 PRYO14603 147 aa7.19□□□□□ -1.26
TNFAIP3-208ENST00000615468 LY6G6DO95868 133 aa7.19□□□□□ -1.26
TNFAIP3-208ENST00000615468 PSPHP1O15172 72 aa7.19□□□□□ -1.26
TNFAIP3-208ENST00000615468 IGLV10-54A0A075B6I4 117 aa7.18□□□□□ -1.26
TNFAIP3-208ENST00000615468 NBPF19A0A087WUL8 3843 aa7.18□□□□□ -1.26
TNFAIP3-208ENST00000615468 NANOS2P60321 138 aaKnown RBP7.18□□□□□ -1.26
TNFAIP3-208ENST00000615468 CXCL6P80162 114 aa7.18□□□□□ -1.26
TNFAIP3-208ENST00000615468 LINC00575Q6W349 94 aa7.18□□□□□ -1.26
TNFAIP3-208ENST00000615468 RETNQ9HD89 108 aa7.18□□□□□ -1.26
TNFAIP3-208ENST00000615468 TRBV7-4A0A0J9YYF1 115 aa7.18□□□□□ -1.26
TNFAIP3-208ENST00000615468 LINC00959A0A1B0GUT2 108 aa7.17□□□□□ -1.26
TNFAIP3-208ENST00000615468 LINC00269Q8N2A0 174 aa7.17□□□□□ -1.26
TNFAIP3-208ENST00000615468 LINC00167Q96N53 147 aa7.17□□□□□ -1.26
TNFAIP3-208ENST00000615468 HIGD2AQ9BW72 106 aa7.17□□□□□ -1.26
TNFAIP3-208ENST00000615468 TEP1Q99973 2627 aaKnown RBP7.17□□□□□ -1.26
TNFAIP3-208ENST00000615468 A0A096LPF7 62 aa7.17□□□□□ -1.26
TNFAIP3-208ENST00000615468 MUC7Q8TAX7 377 aa7.17□□□□□ -1.26
TNFAIP3-208ENST00000615468 PDE6GP18545 87 aa7.16□□□□□ -1.26
TNFAIP3-208ENST00000615468 PRR4Q16378 134 aa7.16□□□□□ -1.26
TNFAIP3-208ENST00000615468 PLA2G2AP14555 144 aa7.16□□□□□ -1.26
TNFAIP3-208ENST00000615468 SPATA3Q8NHX4 192 aa7.16□□□□□ -1.26
TNFAIP3-208ENST00000615468 CR1P17927 2039 aa7.16□□□□□ -1.26
TNFAIP3-208ENST00000615468 TRBV6-8A0A0A6YYG3 113 aa7.16□□□□□ -1.26
TNFAIP3-208ENST00000615468 CELA1Q9UNI1 258 aa7.16□□□□□ -1.26
TNFAIP3-208ENST00000615468 C1orf158Q8N1D5 194 aa7.15□□□□□ -1.26
TNFAIP3-208ENST00000615468 LOC110117498A0A087WWA1 95 aa7.15□□□□□ -1.26
TNFAIP3-208ENST00000615468 PLAC8L1A1L4L8 177 aa7.14□□□□□ -1.27
TNFAIP3-208ENST00000615468 DEFB130BP0DP73 79 aa7.14□□□□□ -1.27
TNFAIP3-208ENST00000615468 DEFB130AP0DP74 79 aa7.14□□□□□ -1.27
TNFAIP3-208ENST00000615468 C6orf223Q8N319 242 aa7.14□□□□□ -1.27
TNFAIP3-208ENST00000615468 Q6YL49 198 aa7.14□□□□□ -1.27
TNFAIP3-208ENST00000615468 NIPBLQ6KC79 2804 aaeCLIP7.13□□□□□ -1.27
TNFAIP3-208ENST00000615468 ZNF702PQ9H963 129 aa7.13□□□□□ -1.27
TNFAIP3-208ENST00000615468 Q8IZM0 81 aa7.13□□□□□ -1.27
TNFAIP3-208ENST00000615468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.12□□□□□ -1.27
TNFAIP3-208ENST00000615468 LINC01006Q8NI28 216 aa7.12□□□□□ -1.27
TNFAIP3-208ENST00000615468 FAM30AQ9NZY2 134 aa7.12□□□□□ -1.27
TNFAIP3-208ENST00000615468 SETXQ7Z333 2677 aaKnown RBP7.12□□□□□ -1.27
TNFAIP3-208ENST00000615468 IGHV4-28A0A0C4DH34 117 aa7.12□□□□□ -1.27
TNFAIP3-208ENST00000615468 C3orf84H3BNL1 204 aa7.12□□□□□ -1.27
TNFAIP3-208ENST00000615468 DNAJC9-AS1A6NH13 148 aa7.11□□□□□ -1.27
TNFAIP3-208ENST00000615468 ATRQ13535 2644 aa7.11□□□□□ -1.27
TNFAIP3-208ENST00000615468 CD164L2Q6UWJ8 174 aa7.1□□□□□ -1.27
TNFAIP3-208ENST00000615468 ZNF469Q96JG9 3925 aaPredicted RBP7.09□□□□□ -1.27
TNFAIP3-208ENST00000615468 F8P00451 2351 aa7.09□□□□□ -1.27
TNFAIP3-208ENST00000615468 DEFB114Q30KQ6 69 aa7.09□□□□□ -1.27
TNFAIP3-208ENST00000615468 ODF3L2Q3SX64 289 aa7.09□□□□□ -1.27
TNFAIP3-208ENST00000615468 DIRC1Q969H9 104 aa7.09□□□□□ -1.27
TNFAIP3-208ENST00000615468 ANGP03950 147 aaKnown RBP7.09□□□□□ -1.27
TNFAIP3-208ENST00000615468 XAGE1AQ9HD64 81 aa7.09□□□□□ -1.27
TNFAIP3-208ENST00000615468 ESM1Q9NQ30 184 aa7.09□□□□□ -1.27
TNFAIP3-208ENST00000615468 GYPEP15421 78 aa7.08□□□□□ -1.28
TNFAIP3-208ENST00000615468 NBEAL2Q6ZNJ1 2754 aa7.08□□□□□ -1.28
TNFAIP3-208ENST00000615468 KRTAP1-3Q8IUG1 177 aa7.08□□□□□ -1.28
TNFAIP3-208ENST00000615468 MRPL55Q7Z7F7 128 aaKnown RBP7.08□□□□□ -1.28
TNFAIP3-208ENST00000615468 HIGD2BQ4VC39 106 aa7.07□□□□□ -1.28
TNFAIP3-208ENST00000615468 PRR15Q8IV56 129 aa7.07□□□□□ -1.28
TNFAIP3-208ENST00000615468 Q8NDZ9 215 aa7.07□□□□□ -1.28
TNFAIP3-208ENST00000615468 UNQ6190/PRO20217Q6UXQ8 127 aa7.07□□□□□ -1.28
TNFAIP3-208ENST00000615468 Q6ZTC4 211 aa7.07□□□□□ -1.28
TNFAIP3-208ENST00000615468 SPTSSBQ8NFR3 76 aa7.07□□□□□ -1.28
TNFAIP3-208ENST00000615468 DEFB105AQ8NG35 78 aa7.07□□□□□ -1.28
TNFAIP3-208ENST00000615468 CHCHD10Q8WYQ3 142 aaPredicted RBP7.06□□□□□ -1.28
TNFAIP3-208ENST00000615468 ERC2-IT1O76042 136 aa7.06□□□□□ -1.28
TNFAIP3-208ENST00000615468 COX7BP24311 80 aa7.06□□□□□ -1.28
TNFAIP3-208ENST00000615468 COX17Q14061 63 aa7.06□□□□□ -1.28
TNFAIP3-208ENST00000615468 KLK12Q9UKR0 248 aa7.06□□□□□ -1.28
TNFAIP3-208ENST00000615468 C9orf66Q5T8R8 295 aa7.05□□□□□ -1.28
TNFAIP3-208ENST00000615468 C1orf64Q8NEQ6 169 aa7.05□□□□□ -1.28
TNFAIP3-208ENST00000615468 WFDC10AQ9H1F0 79 aa7.05□□□□□ -1.28
TNFAIP3-208ENST00000615468 C16orf74Q96GX8 76 aa7.05□□□□□ -1.28
TNFAIP3-208ENST00000615468 OCR1Q9BZK8 76 aa7.05□□□□□ -1.28
TNFAIP3-208ENST00000615468 SPAG11BQ08648 103 aa7.04□□□□□ -1.28
TNFAIP3-208ENST00000615468 SMIM29Q86T20 159 aa7.04□□□□□ -1.28
TNFAIP3-208ENST00000615468 IGKV4-1P06312 121 aa7.04□□□□□ -1.28
TNFAIP3-208ENST00000615468 C10orf25Q5T742 122 aa7.04□□□□□ -1.28
TNFAIP3-208ENST00000615468 Q6ZRP5 223 aa7.04□□□□□ -1.28
TNFAIP3-208ENST00000615468 hDV103S1A0JD37 113 aa7.04□□□□□ -1.28
TNFAIP3-208ENST00000615468 A8MUN3 132 aa7.03□□□□□ -1.28
TNFAIP3-208ENST00000615468 INAFM1C9JVW0 142 aa7.03□□□□□ -1.28
TNFAIP3-208ENST00000615468 H3BQ85 93 aa7.03□□□□□ -1.28
TNFAIP3-208ENST00000615468 CCL24O00175 119 aa7.03□□□□□ -1.28
TNFAIP3-208ENST00000615468 ZNF73O43830 326 aaPredicted RBP7.03□□□□□ -1.28
TNFAIP3-208ENST00000615468 TRAV22A0A0B4J277 110 aa7.02□□□□□ -1.29
TNFAIP3-208ENST00000615468 FSHBP01225 129 aa7.02□□□□□ -1.29
TNFAIP3-208ENST00000615468 CD164Q04900 197 aa7.02□□□□□ -1.29
TNFAIP3-208ENST00000615468 Q6ZRU5 148 aa7.02□□□□□ -1.29
TNFAIP3-208ENST00000615468 REG3AQ06141 175 aa7.01□□□□□ -1.29
TNFAIP3-208ENST00000615468 KIAA0087Q14695 138 aa7.01□□□□□ -1.29
TNFAIP3-208ENST00000615468 HIVEP1P15822 2718 aa7.01□□□□□ -1.29
TNFAIP3-208ENST00000615468 CYSRT1A8MQ03 144 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 217.5 ms