RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 NF1P21359 2839 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 TRAV10A0A0B4J240 114 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 TRAV22A0A0B4J277 110 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 VCYO14598 125 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 C9orf129Q5T035 196 aaKnown RBP6.12□□□□□ -1.43
VPS11-206ENST00000614944 LINC00269Q8N2A0 174 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 IGHV3-30-3P0DP02 117 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 IGHV4-30-4P0DP06 118 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 ATP11AUNQ6ZP68 121 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 Q6ZTC4 211 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 TMEM254Q8TBM7 123 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 DIRC1Q969H9 104 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 NDUFA12Q9UI09 145 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 MUC4Q99102 2169 aa6.12□□□□□ -1.43
VPS11-206ENST00000614944 RPL39LQ96EH5 51 aaKnown RBP6.12□□□□□ -1.43
VPS11-206ENST00000614944 FLNBO75369 2602 aaKnown RBP6.11□□□□□ -1.43
VPS11-206ENST00000614944 hDV103S1A0JD37 113 aa6.11□□□□□ -1.43
VPS11-206ENST00000614944 UBE2AP49459 152 aa6.11□□□□□ -1.43
VPS11-206ENST00000614944 NKAPP1Q8N9T2 125 aa6.11□□□□□ -1.43
VPS11-206ENST00000614944 A8MU10 97 aa6.11□□□□□ -1.43
VPS11-206ENST00000614944 DEFB104AQ8WTQ1 72 aa6.11□□□□□ -1.43
VPS11-206ENST00000614944 LRCOL1A6NCL2 159 aa6.1□□□□□ -1.43
VPS11-206ENST00000614944 TEP1Q99973 2627 aaKnown RBP6.1□□□□□ -1.43
VPS11-206ENST00000614944 TRBV10-1A0A0K0K1A3 114 aa6.1□□□□□ -1.43
VPS11-206ENST00000614944 A6NN06 94 aa6.1□□□□□ -1.43
VPS11-206ENST00000614944 M0QY20 66 aa6.1□□□□□ -1.43
VPS11-206ENST00000614944 IGHV3-53P01767 116 aa6.1□□□□□ -1.43
VPS11-206ENST00000614944 RPL39P62891 51 aaKnown RBP6.1□□□□□ -1.43
VPS11-206ENST00000614944 PRYO14603 147 aa6.09□□□□□ -1.43
VPS11-206ENST00000614944 NCR3O14931 201 aa6.09□□□□□ -1.43
VPS11-206ENST00000614944 ERC2-IT1O76042 136 aa6.09□□□□□ -1.43
VPS11-206ENST00000614944 HTN1P15515 57 aa6.09□□□□□ -1.43
VPS11-206ENST00000614944 SUMO4Q6EEV6 95 aa6.09□□□□□ -1.43
VPS11-206ENST00000614944 C16orf90A8MZG2 172 aa6.09□□□□□ -1.44
VPS11-206ENST00000614944 POLR2KP53803 58 aaKnown RBP6.09□□□□□ -1.44
VPS11-206ENST00000614944 ZNF625Q96I27 306 aaPredicted RBP6.09□□□□□ -1.44
VPS11-206ENST00000614944 Q8NAQ8 132 aa6.08□□□□□ -1.44
VPS11-206ENST00000614944 TRBV6-4A0A1B0GX49 114 aa6.07□□□□□ -1.44
VPS11-206ENST00000614944 Q9H8V8 135 aa6.07□□□□□ -1.44
VPS11-206ENST00000614944 A0A0J9YXV3 536 aa6.07□□□□□ -1.44
VPS11-206ENST00000614944 FBN1P35555 2871 aaKnown RBP6.07□□□□□ -1.44
VPS11-206ENST00000614944 MGPP08493 103 aa6.06□□□□□ -1.44
VPS11-206ENST00000614944 NREPQ16612 68 aa6.06□□□□□ -1.44
VPS11-206ENST00000614944 HCG22E2RYF7 251 aa6.06□□□□□ -1.44
VPS11-206ENST00000614944 LINC00308Q8TCZ7 52 aa6.06□□□□□ -1.44
VPS11-206ENST00000614944 MIR7-3HGQ8N6C7 128 aa6.05□□□□□ -1.44
VPS11-206ENST00000614944 NOP10Q9NPE3 64 aaKnown RBP6.05□□□□□ -1.44
VPS11-206ENST00000614944 TRGV1A0A0A0MS02 117 aa6.04□□□□□ -1.44
VPS11-206ENST00000614944 CHKB-CPT1BH3BT56 60 aa6.04□□□□□ -1.44
VPS11-206ENST00000614944 Q6ZTI0 123 aa6.04□□□□□ -1.44
VPS11-206ENST00000614944 IGHV4-28A0A0C4DH34 117 aa6.04□□□□□ -1.44
VPS11-206ENST00000614944 F5H697 171 aa6.04□□□□□ -1.44
VPS11-206ENST00000614944 H3BNG1 76 aa6.04□□□□□ -1.44
VPS11-206ENST00000614944 K7EQD1 137 aa6.04□□□□□ -1.44
VPS11-206ENST00000614944 TENM1Q9UKZ4 2725 aa6.04□□□□□ -1.44
VPS11-206ENST00000614944 JMJD7-PLA2G4BH0Y9G9 81 aa6.04□□□□□ -1.44
VPS11-206ENST00000614944 Q8N3U1 123 aa6.04□□□□□ -1.44
VPS11-206ENST00000614944 IGHV3OR16-12A0A075B7B8 117 aa6.03□□□□□ -1.44
VPS11-206ENST00000614944 CXCL6P80162 114 aa6.03□□□□□ -1.44
VPS11-206ENST00000614944 DEFB135Q30KP9 77 aa6.03□□□□□ -1.44
VPS11-206ENST00000614944 Q5VV11 94 aa6.03□□□□□ -1.44
VPS11-206ENST00000614944 C1orf64Q8NEQ6 169 aa6.03□□□□□ -1.44
VPS11-206ENST00000614944 ORMDL1Q9P0S3 153 aa6.03□□□□□ -1.44
VPS11-206ENST00000614944 K7EIL1 84 aa6.03□□□□□ -1.44
VPS11-206ENST00000614944 SPART-AS1P0CW21 52 aa6.03□□□□□ -1.44
VPS11-206ENST00000614944 LINC00313P59037 77 aa6.03□□□□□ -1.44
VPS11-206ENST00000614944 A0A087WYN8 130 aa6.03□□□□□ -1.44
VPS11-206ENST00000614944 LINC01554Q52M75 96 aa6.03□□□□□ -1.44
VPS11-206ENST00000614944 H0YGX0 51 aa6.02□□□□□ -1.45
VPS11-206ENST00000614944 PRM2P04554 102 aa6.02□□□□□ -1.45
VPS11-206ENST00000614944 LINC01547P58512 204 aaPredicted RBP6.02□□□□□ -1.45
VPS11-206ENST00000614944 HAMPP81172 84 aa6.02□□□□□ -1.45
VPS11-206ENST00000614944 FAM74A4Q5TZK3 123 aa6.01□□□□□ -1.45
VPS11-206ENST00000614944 Q6ZSN1 163 aa6.01□□□□□ -1.45
VPS11-206ENST00000614944 MP68P56378 58 aa6.01□□□□□ -1.45
VPS11-206ENST00000614944 RPL36AP83881 106 aaKnown RBP6.01□□□□□ -1.45
VPS11-206ENST00000614944 RPL36ALQ969Q0 106 aaKnown RBP6.01□□□□□ -1.45
VPS11-206ENST00000614944 NIPBLQ6KC79 2804 aaeCLIP6□□□□□ -1.45
VPS11-206ENST00000614944 TRGV2A0A075B6R0 118 aa6□□□□□ -1.45
VPS11-206ENST00000614944 RNASE13Q5GAN3 156 aaKnown RBP6□□□□□ -1.45
VPS11-206ENST00000614944 PRO0255Q9UI72 69 aa6□□□□□ -1.45
VPS11-206ENST00000614944 LECT2O14960 151 aa6□□□□□ -1.45
VPS11-206ENST00000614944 B9D2Q9BPU9 175 aa6□□□□□ -1.45
VPS11-206ENST00000614944 ATRQ13535 2644 aa5.99□□□□□ -1.45
VPS11-206ENST00000614944 PSCAO43653 123 aa5.99□□□□□ -1.45
VPS11-206ENST00000614944 BPY2O14599 106 aa5.99□□□□□ -1.45
VPS11-206ENST00000614944 NDUFA1O15239 70 aa5.99□□□□□ -1.45
VPS11-206ENST00000614944 C20orf203Q8NBC4 194 aa5.98□□□□□ -1.45
VPS11-206ENST00000614944 TRGV4A0A0C4DH28 118 aa5.98□□□□□ -1.45
VPS11-206ENST00000614944 CRPP02741 224 aa5.98□□□□□ -1.45
VPS11-206ENST00000614944 MAST4O15021 2626 aa5.98□□□□□ -1.45
VPS11-206ENST00000614944 IGLV4-3A0A075B6K6 122 aa5.98□□□□□ -1.45
VPS11-206ENST00000614944 IGKV2-29A2NJV5 120 aaPredicted RBP5.98□□□□□ -1.45
VPS11-206ENST00000614944 TRBV6-8A0A0A6YYG3 113 aa5.97□□□□□ -1.45
VPS11-206ENST00000614944 CHCHD7Q9BUK0 85 aa5.97□□□□□ -1.45
VPS11-206ENST00000614944 SLPIP03973 132 aa5.97□□□□□ -1.45
VPS11-206ENST00000614944 CYP4F30PQ9H0H9 118 aa5.97□□□□□ -1.45
VPS11-206ENST00000614944 VWFP04275 2813 aa5.96□□□□□ -1.45
VPS11-206ENST00000614944 A0A0A0MQY5 61 aa5.96□□□□□ -1.46
VPS11-206ENST00000614944 LINC00337Q8N6G1 96 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms