RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CTAG1AP78358 180 aa5.13□□□□□ -1.59
PCDH9-205ENST00000614931 GAGE2EQ4V326 116 aa5.13□□□□□ -1.59
PCDH9-205ENST00000614931 C9orf129Q5T035 196 aaKnown RBP5.13□□□□□ -1.59
PCDH9-205ENST00000614931 SDIM1Q6ZPB5 146 aa5.13□□□□□ -1.59
PCDH9-205ENST00000614931 LINC00308Q8TCZ7 52 aa5.13□□□□□ -1.59
PCDH9-205ENST00000614931 XAGE1AQ9HD64 81 aa5.13□□□□□ -1.59
PCDH9-205ENST00000614931 GAGE2DQ9UEU5 116 aa5.13□□□□□ -1.59
PCDH9-205ENST00000614931 PCP4L1A6NKN8 68 aa5.12□□□□□ -1.59
PCDH9-205ENST00000614931 GCSHP23434 173 aa5.12□□□□□ -1.59
PCDH9-205ENST00000614931 GAGE2BQ13066 116 aa5.12□□□□□ -1.59
PCDH9-205ENST00000614931 COX17Q14061 63 aa5.12□□□□□ -1.59
PCDH9-205ENST00000614931 KRTAP7-1Q8IUC3 87 aa5.12□□□□□ -1.59
PCDH9-205ENST00000614931 MUSTN1Q8IVN3 82 aa5.12□□□□□ -1.59
PCDH9-205ENST00000614931 HIST1H4GQ99525 98 aa5.12□□□□□ -1.59
PCDH9-205ENST00000614931 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-205ENST00000614931 DNAH8Q96JB1 4490 aa5.12□□□□□ -1.59
PCDH9-205ENST00000614931 IGKV2-24A0A0C4DH68 120 aa5.11□□□□□ -1.59
PCDH9-205ENST00000614931 LOC107984156A0A0G2JMH3 177 aa5.11□□□□□ -1.59
PCDH9-205ENST00000614931 FAM168BA1KXE4 195 aa5.11□□□□□ -1.59
PCDH9-205ENST00000614931 PTTG1IPP53801 180 aa5.11□□□□□ -1.59
PCDH9-205ENST00000614931 FXYD2P54710 66 aa5.11□□□□□ -1.59
PCDH9-205ENST00000614931 HSD52Q0P140 79 aa5.11□□□□□ -1.59
PCDH9-205ENST00000614931 SRSF9Q13242 221 aaKnown RBP eCLIP5.11□□□□□ -1.59
PCDH9-205ENST00000614931 CIRBPQ14011 172 aaKnown RBP5.11□□□□□ -1.59
PCDH9-205ENST00000614931 ARL17AQ8IVW1 177 aa5.11□□□□□ -1.59
PCDH9-205ENST00000614931 HSPG2P98160 4391 aa5.1□□□□□ -1.59
PCDH9-205ENST00000614931 LINC00587B1AMM8 73 aa5.1□□□□□ -1.59
PCDH9-205ENST00000614931 HINT1P49773 126 aaPredicted RBP5.1□□□□□ -1.59
PCDH9-205ENST00000614931 TAL2Q16559 108 aa5.1□□□□□ -1.59
PCDH9-205ENST00000614931 SERTAD4-AS1Q5TG53 156 aa5.1□□□□□ -1.59
PCDH9-205ENST00000614931 CEND1Q8N111 149 aa5.1□□□□□ -1.59
PCDH9-205ENST00000614931 FAM30AQ9NZY2 134 aa5.1□□□□□ -1.59
PCDH9-205ENST00000614931 A4D1N5 150 aa5.09□□□□□ -1.59
PCDH9-205ENST00000614931 EPM2AB3EWF7 344 aa5.09□□□□□ -1.59
PCDH9-205ENST00000614931 VPREB1P12018 145 aa5.09□□□□□ -1.59
PCDH9-205ENST00000614931 IFITM1P13164 125 aa5.09□□□□□ -1.59
PCDH9-205ENST00000614931 BVES-AS1Q5T3Y7 98 aa5.09□□□□□ -1.59
PCDH9-205ENST00000614931 Q6ZVH6 145 aa5.09□□□□□ -1.59
PCDH9-205ENST00000614931 SPACA4Q8TDM5 124 aa5.09□□□□□ -1.59
PCDH9-205ENST00000614931 LRP1BQ9NZR2 4599 aa5.09□□□□□ -1.59
PCDH9-205ENST00000614931 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
PCDH9-205ENST00000614931 IGKV2-28A0A075B6P5 120 aa5.08□□□□□ -1.6
PCDH9-205ENST00000614931 A0A1W2PNN7 141 aa5.08□□□□□ -1.6
PCDH9-205ENST00000614931 IGKV2D-28P01615 120 aa5.08□□□□□ -1.6
PCDH9-205ENST00000614931 PRR3P79522 188 aaKnown RBP5.08□□□□□ -1.6
PCDH9-205ENST00000614931 KRTAP3-3Q9BYR6 98 aa5.08□□□□□ -1.6
PCDH9-205ENST00000614931 KRTAP3-2Q9BYR7 98 aa5.08□□□□□ -1.6
PCDH9-205ENST00000614931 PPDPFQ9H3Y8 114 aa5.08□□□□□ -1.6
PCDH9-205ENST00000614931 NCR3O14931 201 aa5.07□□□□□ -1.6
PCDH9-205ENST00000614931 Q6ZSA8 131 aa5.07□□□□□ -1.6
PCDH9-205ENST00000614931 FAM19A5Q7Z5A7 132 aaPredicted RBP5.07□□□□□ -1.6
PCDH9-205ENST00000614931 LINC00337Q8N6G1 96 aa5.07□□□□□ -1.6
PCDH9-205ENST00000614931 APOBP04114 4563 aaKnown RBP5.06□□□□□ -1.6
PCDH9-205ENST00000614931 IGLV5-37A0A075B6J1 123 aa5.06□□□□□ -1.6
PCDH9-205ENST00000614931 K7ERJ3 54 aa5.06□□□□□ -1.6
PCDH9-205ENST00000614931 SMR3BP02814 79 aaPredicted RBP5.06□□□□□ -1.6
PCDH9-205ENST00000614931 CFC1BP0CG36 223 aa5.06□□□□□ -1.6
PCDH9-205ENST00000614931 CFC1P0CG37 223 aa5.06□□□□□ -1.6
PCDH9-205ENST00000614931 HAMPP81172 84 aa5.06□□□□□ -1.6
PCDH9-205ENST00000614931 RPL24P83731 157 aaKnown RBP5.06□□□□□ -1.6
PCDH9-205ENST00000614931 Q5VSD8 79 aa5.06□□□□□ -1.6
PCDH9-205ENST00000614931 SNHG12Q9BXW3 62 aa5.06□□□□□ -1.6
PCDH9-205ENST00000614931 PLA2G2DQ9UNK4 145 aa5.06□□□□□ -1.6
PCDH9-205ENST00000614931 A0A087WYN8 130 aa5.05□□□□□ -1.6
PCDH9-205ENST00000614931 A0A1B0GWB2 263 aa5.05□□□□□ -1.6
PCDH9-205ENST00000614931 NDUFC2O95298 119 aa5.05□□□□□ -1.6
PCDH9-205ENST00000614931 NHP2Q9NX24 153 aaKnown RBP5.05□□□□□ -1.6
PCDH9-205ENST00000614931 PKIGQ9Y2B9 76 aa5.05□□□□□ -1.6
PCDH9-205ENST00000614931 M0QXV9 152 aa5.04□□□□□ -1.6
PCDH9-205ENST00000614931 M0R143 59 aa5.04□□□□□ -1.6
PCDH9-205ENST00000614931 INAFM2P0DMQ5 153 aa5.04□□□□□ -1.6
PCDH9-205ENST00000614931 BATFQ16520 125 aa5.04□□□□□ -1.6
PCDH9-205ENST00000614931 PHF5AQ7RTV0 110 aaKnown RBP5.04□□□□□ -1.6
PCDH9-205ENST00000614931 KRTAP11-1Q8IUC1 163 aa5.04□□□□□ -1.6
PCDH9-205ENST00000614931 C7orf33Q8WU49 177 aa5.04□□□□□ -1.6
PCDH9-205ENST00000614931 PLAC8Q9NZF1 115 aa5.04□□□□□ -1.6
PCDH9-205ENST00000614931 C22orf24Q9Y442 160 aa5.04□□□□□ -1.6
PCDH9-205ENST00000614931 A0A0B4J2C4 111 aa5.03□□□□□ -1.6
PCDH9-205ENST00000614931 GAGE10A6NGK3 116 aa5.03□□□□□ -1.6
PCDH9-205ENST00000614931 FAM229AH3BQW9 127 aa5.03□□□□□ -1.6
PCDH9-205ENST00000614931 SCXQ7RTU7 201 aa5.03□□□□□ -1.6
PCDH9-205ENST00000614931 COPS9Q8WXC6 57 aa5.03□□□□□ -1.6
PCDH9-205ENST00000614931 TRBV10-3A0A0K0K1G6 114 aa5.02□□□□□ -1.61
PCDH9-205ENST00000614931 TRBV10-2A0A0K0K1G8 114 aa5.02□□□□□ -1.61
PCDH9-205ENST00000614931 TMEM238LA0A1B0GVL6 79 aa5.02□□□□□ -1.61
PCDH9-205ENST00000614931 A6NJY4 79 aa5.02□□□□□ -1.61
PCDH9-205ENST00000614931 M0R378 163 aa5.02□□□□□ -1.61
PCDH9-205ENST00000614931 RPL13AP40429 203 aaKnown RBP5.02□□□□□ -1.61
PCDH9-205ENST00000614931 NKAPP1Q8N9T2 125 aa5.02□□□□□ -1.61
PCDH9-205ENST00000614931 CIRBP-AS1Q8TBR5 109 aa5.02□□□□□ -1.61
PCDH9-205ENST00000614931 LINC00167Q96N53 147 aa5.02□□□□□ -1.61
PCDH9-205ENST00000614931 LINC00474Q9P2X8 69 aa5.02□□□□□ -1.61
PCDH9-205ENST00000614931 RPL37AP8A6NKH3 93 aa5.01□□□□□ -1.61
PCDH9-205ENST00000614931 IGLV6-57P01721 117 aa5.01□□□□□ -1.61
PCDH9-205ENST00000614931 MRPL55Q7Z7F7 128 aaKnown RBP5.01□□□□□ -1.61
PCDH9-205ENST00000614931 DPH3Q96FX2 82 aa5.01□□□□□ -1.61
PCDH9-205ENST00000614931 IGLV1-50A0A075B6I6 118 aa5□□□□□ -1.61
PCDH9-205ENST00000614931 A6NDN8 102 aa5□□□□□ -1.61
PCDH9-205ENST00000614931 OR13C6PQ8NH95 151 aa5□□□□□ -1.61
PCDH9-205ENST00000614931 RAB37Q96AX2 223 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms