RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SFTA2Q6UW10 78 aa10.24□□□□□ -0.77
SMN2-213ENST00000614240 UQCC3Q6UW78 93 aa10.24□□□□□ -0.77
SMN2-213ENST00000614240 LINC00158P58513 81 aa10.23□□□□□ -0.77
SMN2-213ENST00000614240 Q8NDZ9 215 aa10.23□□□□□ -0.77
SMN2-213ENST00000614240 LINC00337Q8N6G1 96 aa10.22□□□□□ -0.77
SMN2-213ENST00000614240 ZNF706Q9Y5V0 76 aaPredicted RBP10.22□□□□□ -0.77
SMN2-213ENST00000614240 BAGE3Q86Y29 109 aa10.21□□□□□ -0.77
SMN2-213ENST00000614240 SPRR4Q96PI1 79 aa10.21□□□□□ -0.77
SMN2-213ENST00000614240 SEC11CQ9BY50 192 aa10.21□□□□□ -0.77
SMN2-213ENST00000614240 A0A096LNJ9 63 aa10.2□□□□□ -0.78
SMN2-213ENST00000614240 A0A0U1RRA0 63 aa10.2□□□□□ -0.78
SMN2-213ENST00000614240 C11orf86A6NJI1 115 aa10.2□□□□□ -0.78
SMN2-213ENST00000614240 HBDP02042 147 aa10.2□□□□□ -0.78
SMN2-213ENST00000614240 LINC00614P0C842 121 aa10.2□□□□□ -0.78
SMN2-213ENST00000614240 PMCHL1Q16048 86 aa10.2□□□□□ -0.78
SMN2-213ENST00000614240 ATP6V1G1O75348 118 aa10.19□□□□□ -0.78
SMN2-213ENST00000614240 FP248Q71RG6 208 aaPredicted RBP10.19□□□□□ -0.78
SMN2-213ENST00000614240 KRTAP9-6A0A140TA67 174 aa10.16□□□□□ -0.78
SMN2-213ENST00000614240 DAND5Q8N907 189 aa10.16□□□□□ -0.78
SMN2-213ENST00000614240 Q8NBF4 154 aa10.16□□□□□ -0.78
SMN2-213ENST00000614240 C18orf32Q8TCD1 76 aa10.16□□□□□ -0.78
SMN2-213ENST00000614240 RPS10P5Q9NQ39 176 aa10.16□□□□□ -0.78
SMN2-213ENST00000614240 TRAPPC1Q9Y5R8 145 aa10.16□□□□□ -0.78
SMN2-213ENST00000614240 URB1-AS1Q96HZ7 61 aa10.15□□□□□ -0.78
SMN2-213ENST00000614240 CHTOPQ9Y3Y2 248 aaKnown RBP10.15□□□□□ -0.78
SMN2-213ENST00000614240 PRYO14603 147 aa10.14□□□□□ -0.79
SMN2-213ENST00000614240 BOD1L2Q8IYS8 172 aa10.13□□□□□ -0.79
SMN2-213ENST00000614240 SMCR5Q8TEV8 140 aa10.13□□□□□ -0.79
SMN2-213ENST00000614240 ETDCA0A1B0GVM5 59 aa10.12□□□□□ -0.79
SMN2-213ENST00000614240 NCR3O14931 201 aa10.12□□□□□ -0.79
SMN2-213ENST00000614240 RHEBQ15382 184 aa10.12□□□□□ -0.79
SMN2-213ENST00000614240 MEIG1Q5JSS6 88 aa10.12□□□□□ -0.79
SMN2-213ENST00000614240 SMIM13P0DJ93 91 aa10.11□□□□□ -0.79
SMN2-213ENST00000614240 FAT4Q6V0I7 4981 aa10.11□□□□□ -0.79
SMN2-213ENST00000614240 TMEM223A0PJW6 202 aa10.1□□□□□ -0.79
SMN2-213ENST00000614240 SPINK1P00995 79 aa10.1□□□□□ -0.79
SMN2-213ENST00000614240 KRTAP13-3Q3SY46 172 aa10.1□□□□□ -0.79
SMN2-213ENST00000614240 LINC01547P58512 204 aaPredicted RBP10.09□□□□□ -0.79
SMN2-213ENST00000614240 S100A12P80511 92 aa10.09□□□□□ -0.79
SMN2-213ENST00000614240 COMMD7Q86VX2 200 aa10.09□□□□□ -0.79
SMN2-213ENST00000614240 KCNQ1DNQ9H478 68 aa10.09□□□□□ -0.79
SMN2-213ENST00000614240 NDUFA12Q9UI09 145 aa10.09□□□□□ -0.79
SMN2-213ENST00000614240 ASB16-AS1Q495Z4 193 aa10.08□□□□□ -0.8
SMN2-213ENST00000614240 GAGE2AQ6NT46 116 aa10.08□□□□□ -0.8
SMN2-213ENST00000614240 MIR7-3HGQ8N6C7 128 aa10.08□□□□□ -0.8
SMN2-213ENST00000614240 SPRR1AP35321 89 aa10.07□□□□□ -0.8
SMN2-213ENST00000614240 SEC61BP60468 96 aaKnown RBP10.07□□□□□ -0.8
SMN2-213ENST00000614240 TRBV10-3A0A0K0K1G6 114 aa10.06□□□□□ -0.8
SMN2-213ENST00000614240 LINC00587B1AMM8 73 aa10.06□□□□□ -0.8
SMN2-213ENST00000614240 HERV-K104P63124 156 aa10.06□□□□□ -0.8
SMN2-213ENST00000614240 IGLV9-49A0A0B4J1Y8 123 aa10.05□□□□□ -0.8
SMN2-213ENST00000614240 TRAV12-1A0A0B4J245 112 aa10.05□□□□□ -0.8
SMN2-213ENST00000614240 IFITM2Q01629 132 aa10.05□□□□□ -0.8
SMN2-213ENST00000614240 C10orf91Q5T1B1 145 aa10.05□□□□□ -0.8
SMN2-213ENST00000614240 IFI27L1Q96BM0 104 aa10.05□□□□□ -0.8
SMN2-213ENST00000614240 MAP1LC3CQ9BXW4 147 aa10.05□□□□□ -0.8
SMN2-213ENST00000614240 MOBPQ13875 183 aa10.04□□□□□ -0.8
SMN2-213ENST00000614240 LINC00483Q53H64 154 aa10.04□□□□□ -0.8
SMN2-213ENST00000614240 KRTAP4-16G5E9R7 235 aaPredicted RBP10.03□□□□□ -0.8
SMN2-213ENST00000614240 FAM19A2Q8N3H0 131 aa10.03□□□□□ -0.8
SMN2-213ENST00000614240 MYMXA0A1B0GTQ4 84 aa10.02□□□□□ -0.81
SMN2-213ENST00000614240 SSBP3-AS1Q7Z2R9 100 aa10.01□□□□□ -0.81
SMN2-213ENST00000614240 CHCHD1Q96BP2 118 aaKnown RBP10.01□□□□□ -0.81
SMN2-213ENST00000614240 B5MCH6 92 aa10□□□□□ -0.81
SMN2-213ENST00000614240 SLC25A20O43772 301 aa9.99□□□□□ -0.81
SMN2-213ENST00000614240 ERC2-IT1O76042 136 aa9.99□□□□□ -0.81
SMN2-213ENST00000614240 DDTP30046 118 aa9.99□□□□□ -0.81
SMN2-213ENST00000614240 RPS29P62273 56 aaKnown RBP9.98□□□□□ -0.81
SMN2-213ENST00000614240 Q8N377 158 aa9.98□□□□□ -0.81
SMN2-213ENST00000614240 KRTAP4-1Q9BYQ7 146 aa9.98□□□□□ -0.81
SMN2-213ENST00000614240 H0Y8G0 127 aa9.97□□□□□ -0.81
SMN2-213ENST00000614240 MUC17Q685J3 4493 aa9.96□□□□□ -0.81
SMN2-213ENST00000614240 APOC3P02656 99 aa9.96□□□□□ -0.82
SMN2-213ENST00000614240 C9orf153Q5TBE3 101 aa9.95□□□□□ -0.82
SMN2-213ENST00000614240 MIEN1Q9BRT3 115 aa9.95□□□□□ -0.82
SMN2-213ENST00000614240 TRBV10-2A0A0K0K1G8 114 aa9.94□□□□□ -0.82
SMN2-213ENST00000614240 HSBP1O75506 76 aa9.94□□□□□ -0.82
SMN2-213ENST00000614240 S100A7L2Q5SY68 101 aa9.94□□□□□ -0.82
SMN2-213ENST00000614240 Q6ZRX8 168 aa9.94□□□□□ -0.82
SMN2-213ENST00000614240 Q9BRP9 147 aa9.94□□□□□ -0.82
SMN2-213ENST00000614240 LEPROTO15243 131 aa9.93□□□□□ -0.82
SMN2-213ENST00000614240 SNAPINO95295 136 aa9.93□□□□□ -0.82
SMN2-213ENST00000614240 NDUFA5Q16718 116 aa9.93□□□□□ -0.82
SMN2-213ENST00000614240 JOSD1Q15040 202 aaPredicted RBP9.92□□□□□ -0.82
SMN2-213ENST00000614240 SPANXB1Q9NS25 103 aaPredicted RBP9.92□□□□□ -0.82
SMN2-213ENST00000614240 LOC107984156A0A0G2JMH3 177 aa9.91□□□□□ -0.82
SMN2-213ENST00000614240 TSPEAR-AS2P59090 65 aa9.91□□□□□ -0.82
SMN2-213ENST00000614240 XP32Q5T750 250 aa9.91□□□□□ -0.82
SMN2-213ENST00000614240 ARL17AQ8IVW1 177 aa9.91□□□□□ -0.82
SMN2-213ENST00000614240 SVBPQ8N300 66 aa9.91□□□□□ -0.82
SMN2-213ENST00000614240 TRAV23DV6A0A075B6W5 121 aa9.88□□□□□ -0.83
SMN2-213ENST00000614240 J3QQQ9 107 aa9.88□□□□□ -0.83
SMN2-213ENST00000614240 LGALS3P17931 250 aaKnown RBP9.88□□□□□ -0.83
SMN2-213ENST00000614240 HERVK_113P61574 105 aa9.88□□□□□ -0.83
SMN2-213ENST00000614240 IGLV6-57P01721 117 aa9.87□□□□□ -0.83
SMN2-213ENST00000614240 PLNP26678 52 aa9.87□□□□□ -0.83
SMN2-213ENST00000614240 LEPROTL1O95214 131 aa9.86□□□□□ -0.83
SMN2-213ENST00000614240 NDUFC2O95298 119 aa9.86□□□□□ -0.83
SMN2-213ENST00000614240 NMUP48645 174 aa9.86□□□□□ -0.83
SMN2-213ENST00000614240 ZNF73O43830 326 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms