RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 NCR3O14931 201 aa6.94□□□□□ -1.3
GGA3-221ENST00000614198 LECT2O14960 151 aa6.94□□□□□ -1.3
GGA3-221ENST00000614198 CMC4P56277 68 aaPredicted RBP6.94□□□□□ -1.3
GGA3-221ENST00000614198 C1orf195Q5TG92 126 aa6.94□□□□□ -1.3
GGA3-221ENST00000614198 UBE2L6O14933 153 aa6.93□□□□□ -1.3
GGA3-221ENST00000614198 TRAV23DV6A0A075B6W5 121 aa6.93□□□□□ -1.3
GGA3-221ENST00000614198 MIR7-3HGQ8N6C7 128 aa6.93□□□□□ -1.3
GGA3-221ENST00000614198 SND1-IT1Q9HBX3 110 aa6.93□□□□□ -1.3
GGA3-221ENST00000614198 C9orf129Q5T035 196 aaKnown RBP6.92□□□□□ -1.3
GGA3-221ENST00000614198 C16orf74Q96GX8 76 aa6.92□□□□□ -1.3
GGA3-221ENST00000614198 DNAH7Q8WXX0 4024 aa6.92□□□□□ -1.3
GGA3-221ENST00000614198 HTN3P15516 51 aa6.92□□□□□ -1.3
GGA3-221ENST00000614198 RPL36AP83881 106 aaKnown RBP6.92□□□□□ -1.3
GGA3-221ENST00000614198 RPL36ALQ969Q0 106 aaKnown RBP6.92□□□□□ -1.3
GGA3-221ENST00000614198 EPM2AB3EWF7 344 aa6.92□□□□□ -1.3
GGA3-221ENST00000614198 TRAV13-2A0A0B4J235 113 aa6.91□□□□□ -1.3
GGA3-221ENST00000614198 EGFEM1PQ0D2K5 195 aa6.91□□□□□ -1.3
GGA3-221ENST00000614198 LINC00242Q5T6M2 205 aa6.91□□□□□ -1.3
GGA3-221ENST00000614198 A0A087WYN8 130 aa6.91□□□□□ -1.3
GGA3-221ENST00000614198 Q8NAQ8 132 aa6.9□□□□□ -1.3
GGA3-221ENST00000614198 DNAH9Q9NYC9 4486 aa6.9□□□□□ -1.3
GGA3-221ENST00000614198 TRGV4A0A0C4DH28 118 aa6.89□□□□□ -1.31
GGA3-221ENST00000614198 GHRHP01286 108 aa6.89□□□□□ -1.31
GGA3-221ENST00000614198 S100A7L2Q5SY68 101 aa6.89□□□□□ -1.31
GGA3-221ENST00000614198 APOC4P55056 127 aa6.89□□□□□ -1.31
GGA3-221ENST00000614198 SMIM1B2RUZ4 78 aa6.89□□□□□ -1.31
GGA3-221ENST00000614198 K7EIL1 84 aa6.89□□□□□ -1.31
GGA3-221ENST00000614198 MPLKIPQ8TAP9 179 aa6.89□□□□□ -1.31
GGA3-221ENST00000614198 SERP1Q9Y6X1 66 aa6.89□□□□□ -1.31
GGA3-221ENST00000614198 H0YGX0 51 aa6.88□□□□□ -1.31
GGA3-221ENST00000614198 NTM-AS1Q6ZSK4 140 aa6.88□□□□□ -1.31
GGA3-221ENST00000614198 SMIM11BQ8TCY0 68 aa6.88□□□□□ -1.31
GGA3-221ENST00000614198 LINC00474Q9P2X8 69 aa6.88□□□□□ -1.31
GGA3-221ENST00000614198 ATP5EP2Q5VTU8 51 aa6.88□□□□□ -1.31
GGA3-221ENST00000614198 FAM19A3Q7Z5A8 133 aa6.88□□□□□ -1.31
GGA3-221ENST00000614198 K7EQD1 137 aa6.87□□□□□ -1.31
GGA3-221ENST00000614198 SS18Q15532 418 aa6.87□□□□□ -1.31
GGA3-221ENST00000614198 LINC00337Q8N6G1 96 aa6.87□□□□□ -1.31
GGA3-221ENST00000614198 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
GGA3-221ENST00000614198 RBM3P98179 157 aaKnown RBP6.87□□□□□ -1.31
GGA3-221ENST00000614198 Q8N3U1 123 aa6.87□□□□□ -1.31
GGA3-221ENST00000614198 CCKP06307 115 aa6.86□□□□□ -1.31
GGA3-221ENST00000614198 IGKV2-28A0A075B6P5 120 aa6.86□□□□□ -1.31
GGA3-221ENST00000614198 IGKV2D-28P01615 120 aa6.86□□□□□ -1.31
GGA3-221ENST00000614198 XCL1P47992 114 aa6.86□□□□□ -1.31
GGA3-221ENST00000614198 A0A0J9YWU9 116 aa6.85□□□□□ -1.31
GGA3-221ENST00000614198 ENHOQ6UWT2 76 aa6.85□□□□□ -1.31
GGA3-221ENST00000614198 LYPD5Q6UWN5 251 aa6.85□□□□□ -1.31
GGA3-221ENST00000614198 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
GGA3-221ENST00000614198 GYPEP15421 78 aa6.84□□□□□ -1.31
GGA3-221ENST00000614198 DAD1P61803 113 aa6.84□□□□□ -1.31
GGA3-221ENST00000614198 C6orf226Q5I0X4 101 aa6.84□□□□□ -1.31
GGA3-221ENST00000614198 H7BZZ5 65 aa6.84□□□□□ -1.31
GGA3-221ENST00000614198 NANOS2P60321 138 aaKnown RBP6.84□□□□□ -1.31
GGA3-221ENST00000614198 FAM19A1Q7Z5A9 133 aa6.84□□□□□ -1.31
GGA3-221ENST00000614198 ORMDL1Q9P0S3 153 aa6.84□□□□□ -1.31
GGA3-221ENST00000614198 TRBV10-3A0A0K0K1G6 114 aa6.83□□□□□ -1.32
GGA3-221ENST00000614198 HAMPP81172 84 aa6.83□□□□□ -1.32
GGA3-221ENST00000614198 Q6ZTC4 211 aa6.83□□□□□ -1.32
GGA3-221ENST00000614198 BCE1O60756 84 aa6.83□□□□□ -1.32
GGA3-221ENST00000614198 CCL18P55774 89 aa6.83□□□□□ -1.32
GGA3-221ENST00000614198 CLPSL2Q6UWE3 100 aa6.83□□□□□ -1.32
GGA3-221ENST00000614198 SMIM26A0A096LP01 95 aa6.82□□□□□ -1.32
GGA3-221ENST00000614198 FBN3Q75N90 2809 aa6.82□□□□□ -1.32
GGA3-221ENST00000614198 LINC00612Q8N6U2 182 aa6.82□□□□□ -1.32
GGA3-221ENST00000614198 MIFP14174 115 aa6.81□□□□□ -1.32
GGA3-221ENST00000614198 UBL5Q9BZL1 73 aa6.81□□□□□ -1.32
GGA3-221ENST00000614198 TRAV7A0A075B6U4 112 aa6.81□□□□□ -1.32
GGA3-221ENST00000614198 PRR3P79522 188 aaKnown RBP6.81□□□□□ -1.32
GGA3-221ENST00000614198 CDC42SE2Q9NRR3 84 aa6.8□□□□□ -1.32
GGA3-221ENST00000614198 LAMTOR3Q9UHA4 124 aa6.8□□□□□ -1.32
GGA3-221ENST00000614198 JMJD7-PLA2G4BH0Y9G9 81 aa6.8□□□□□ -1.32
GGA3-221ENST00000614198 FP248Q71RG6 208 aaPredicted RBP6.8□□□□□ -1.32
GGA3-221ENST00000614198 RMI2Q96E14 147 aa6.8□□□□□ -1.32
GGA3-221ENST00000614198 TRBV6-4A0A1B0GX49 114 aa6.8□□□□□ -1.32
GGA3-221ENST00000614198 SPART-AS1P0CW21 52 aa6.8□□□□□ -1.32
GGA3-221ENST00000614198 KLKP1Q107X0 134 aa6.8□□□□□ -1.32
GGA3-221ENST00000614198 IGLV4-60A0A075B6I1 120 aa6.79□□□□□ -1.32
GGA3-221ENST00000614198 DNAH10Q8IVF4 4471 aa6.79□□□□□ -1.32
GGA3-221ENST00000614198 F8WEM9 126 aa6.79□□□□□ -1.32
GGA3-221ENST00000614198 LINC00167Q96N53 147 aa6.79□□□□□ -1.32
GGA3-221ENST00000614198 LYRM9A8MSI8 78 aa6.78□□□□□ -1.32
GGA3-221ENST00000614198 PRO0255Q9UI72 69 aa6.78□□□□□ -1.32
GGA3-221ENST00000614198 STARD9Q9P2P6 4700 aa6.78□□□□□ -1.32
GGA3-221ENST00000614198 PLECQ15149 4684 aaKnown RBP6.78□□□□□ -1.32
GGA3-221ENST00000614198 TRBV10-1A0A0K0K1A3 114 aa6.77□□□□□ -1.33
GGA3-221ENST00000614198 TRBV6-8A0A0A6YYG3 113 aa6.76□□□□□ -1.33
GGA3-221ENST00000614198 SCXQ7RTU7 201 aa6.76□□□□□ -1.33
GGA3-221ENST00000614198 TRBV7-6A0A0J9YX20 115 aa6.75□□□□□ -1.33
GGA3-221ENST00000614198 LRCOL1A6NCL2 159 aa6.75□□□□□ -1.33
GGA3-221ENST00000614198 IBA57-AS1B1ANH7 110 aa6.75□□□□□ -1.33
GGA3-221ENST00000614198 TMEM256-PLSCR3K7ERE1 68 aa6.75□□□□□ -1.33
GGA3-221ENST00000614198 DNAH1Q9P2D7 4330 aa6.75□□□□□ -1.33
GGA3-221ENST00000614198 C11orf45Q8TAV5 145 aa6.75□□□□□ -1.33
GGA3-221ENST00000614198 TM2D3Q9BRN9 247 aa6.74□□□□□ -1.33
GGA3-221ENST00000614198 IGLV10-54A0A075B6I4 117 aa6.73□□□□□ -1.33
GGA3-221ENST00000614198 Q8N814 137 aa6.73□□□□□ -1.33
GGA3-221ENST00000614198 A0A087WZ39 114 aa6.73□□□□□ -1.33
GGA3-221ENST00000614198 NDUFC1O43677 76 aa6.73□□□□□ -1.33
GGA3-221ENST00000614198 KPRPQ5T749 579 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms