RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 CFC1BP0CG36 223 aa13.05□□□□□ -0.32
CPNE9-205ENST00000613455 CFC1P0CG37 223 aa13.05□□□□□ -0.32
CPNE9-205ENST00000613455 RPL18AQ02543 176 aaKnown RBP13.05□□□□□ -0.32
CPNE9-205ENST00000613455 GAGE2EQ4V326 116 aa13.05□□□□□ -0.32
CPNE9-205ENST00000613455 GAGE2DQ9UEU5 116 aa13.05□□□□□ -0.32
CPNE9-205ENST00000613455 C9orf163Q8N9P6 203 aa13.05□□□□□ -0.32
CPNE9-205ENST00000613455 Q8NDZ9 215 aa13.05□□□□□ -0.32
CPNE9-205ENST00000613455 DNAH11Q96DT5 4516 aa13.04□□□□□ -0.32
CPNE9-205ENST00000613455 LOC107984640A0A0U1RRK4 108 aa13.04□□□□□ -0.32
CPNE9-205ENST00000613455 C9orf129Q5T035 196 aaKnown RBP13.02□□□□□ -0.32
CPNE9-205ENST00000613455 FUSP35637 526 aaKnown RBP eCLIP13.02□□□□□ -0.33
CPNE9-205ENST00000613455 COL5A1-AS1Q5SY13 56 aa13.02□□□□□ -0.33
CPNE9-205ENST00000613455 IGKV2-28A0A075B6P5 120 aa13.01□□□□□ -0.33
CPNE9-205ENST00000613455 A0A0B4J2C4 111 aa13.01□□□□□ -0.33
CPNE9-205ENST00000613455 IGKV2D-28P01615 120 aa13.01□□□□□ -0.33
CPNE9-205ENST00000613455 LINC01620Q4KN68 170 aa13.01□□□□□ -0.33
CPNE9-205ENST00000613455 GAGE2BQ13066 116 aa13□□□□□ -0.33
CPNE9-205ENST00000613455 NDUFC2O95298 119 aa12.99□□□□□ -0.33
CPNE9-205ENST00000613455 A0A096LNI7 61 aa12.99□□□□□ -0.33
CPNE9-205ENST00000613455 C16orf90A8MZG2 172 aa12.97□□□□□ -0.33
CPNE9-205ENST00000613455 PRR3P79522 188 aaKnown RBP12.97□□□□□ -0.33
CPNE9-205ENST00000613455 LBHQ53QV2 105 aaPredicted RBP12.97□□□□□ -0.33
CPNE9-205ENST00000613455 RAB37Q96AX2 223 aa12.97□□□□□ -0.33
CPNE9-205ENST00000613455 TAX1BP3O14907 124 aa12.96□□□□□ -0.33
CPNE9-205ENST00000613455 SDIM1Q6ZPB5 146 aa12.96□□□□□ -0.33
CPNE9-205ENST00000613455 LINC00337Q8N6G1 96 aa12.96□□□□□ -0.33
CPNE9-205ENST00000613455 PKD1P98161 4303 aa12.96□□□□□ -0.34
CPNE9-205ENST00000613455 PRO1854Q9UHT4 67 aa12.96□□□□□ -0.34
CPNE9-205ENST00000613455 VPREB1P12018 145 aa12.95□□□□□ -0.34
CPNE9-205ENST00000613455 KRTAP10-2P60368 255 aa12.95□□□□□ -0.34
CPNE9-205ENST00000613455 DNAH5Q8TE73 4624 aa12.94□□□□□ -0.34
CPNE9-205ENST00000613455 IGLV5-52A0A0A0MRZ9 124 aa12.94□□□□□ -0.34
CPNE9-205ENST00000613455 IGKV2-24A0A0C4DH68 120 aa12.93□□□□□ -0.34
CPNE9-205ENST00000613455 NCR3O14931 201 aa12.93□□□□□ -0.34
CPNE9-205ENST00000613455 FAM168BA1KXE4 195 aa12.93□□□□□ -0.34
CPNE9-205ENST00000613455 SERTAD4-AS1Q5TG53 156 aa12.93□□□□□ -0.34
CPNE9-205ENST00000613455 PKIGQ9Y2B9 76 aa12.93□□□□□ -0.34
CPNE9-205ENST00000613455 CHTF8P0CG12 524 aa12.92□□□□□ -0.34
CPNE9-205ENST00000613455 RPL13AP40429 203 aaKnown RBP12.92□□□□□ -0.34
CPNE9-205ENST00000613455 PGPEP1Q9NXJ5 209 aa12.92□□□□□ -0.34
CPNE9-205ENST00000613455 PLA2G2DQ9UNK4 145 aa12.92□□□□□ -0.34
CPNE9-205ENST00000613455 TRAV13-2A0A0B4J235 113 aa12.91□□□□□ -0.34
CPNE9-205ENST00000613455 KRTAP7-1Q8IUC3 87 aa12.91□□□□□ -0.34
CPNE9-205ENST00000613455 TSPAN13O95857 204 aa12.91□□□□□ -0.34
CPNE9-205ENST00000613455 LINC00336Q6ZUF6 198 aa12.91□□□□□ -0.34
CPNE9-205ENST00000613455 TRBV10-2A0A0K0K1G8 114 aa12.89□□□□□ -0.35
CPNE9-205ENST00000613455 PANO1I0J062 215 aa12.89□□□□□ -0.35
CPNE9-205ENST00000613455 NAA38Q9BRA0 125 aaKnown RBP12.89□□□□□ -0.35
CPNE9-205ENST00000613455 H7C2G1 150 aa12.88□□□□□ -0.35
CPNE9-205ENST00000613455 C9orf118A6NHY6 69 aa12.88□□□□□ -0.35
CPNE9-205ENST00000613455 IGLV5-37A0A075B6J1 123 aa12.87□□□□□ -0.35
CPNE9-205ENST00000613455 A0A1W2PNN7 141 aa12.86□□□□□ -0.35
CPNE9-205ENST00000613455 FAM19A5Q7Z5A7 132 aaPredicted RBP12.86□□□□□ -0.35
CPNE9-205ENST00000613455 OR13C6PQ8NH95 151 aa12.86□□□□□ -0.35
CPNE9-205ENST00000613455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.86□□□□□ -0.35
CPNE9-205ENST00000613455 H3BUT2 72 aa12.85□□□□□ -0.35
CPNE9-205ENST00000613455 SPACA4Q8TDM5 124 aa12.85□□□□□ -0.35
CPNE9-205ENST00000613455 LINC00474Q9P2X8 69 aa12.85□□□□□ -0.35
CPNE9-205ENST00000613455 RYR3Q15413 4870 aa12.85□□□□□ -0.35
CPNE9-205ENST00000613455 M0R378 163 aa12.85□□□□□ -0.35
CPNE9-205ENST00000613455 IGLV6-57P01721 117 aa12.84□□□□□ -0.35
CPNE9-205ENST00000613455 Q1RN00 199 aa12.84□□□□□ -0.35
CPNE9-205ENST00000613455 NKAPP1Q8N9T2 125 aa12.84□□□□□ -0.35
CPNE9-205ENST00000613455 S100A7L2Q5SY68 101 aa12.83□□□□□ -0.36
CPNE9-205ENST00000613455 TMEM126AQ9H061 195 aa12.83□□□□□ -0.36
CPNE9-205ENST00000613455 C22orf24Q9Y442 160 aa12.82□□□□□ -0.36
CPNE9-205ENST00000613455 TRBV10-3A0A0K0K1G6 114 aa12.82□□□□□ -0.36
CPNE9-205ENST00000613455 C7orf33Q8WU49 177 aa12.82□□□□□ -0.36
CPNE9-205ENST00000613455 SMIM11BQ8TCY0 68 aa12.81□□□□□ -0.36
CPNE9-205ENST00000613455 A0A1B0GVY2 172 aa12.8□□□□□ -0.36
CPNE9-205ENST00000613455 GAGE10A6NGK3 116 aa12.79□□□□□ -0.36
CPNE9-205ENST00000613455 TRIAP1O43715 76 aa12.79□□□□□ -0.36
CPNE9-205ENST00000613455 DNAH8Q96JB1 4490 aa12.79□□□□□ -0.36
CPNE9-205ENST00000613455 A0A1W2PPM0 123 aa12.79□□□□□ -0.36
CPNE9-205ENST00000613455 M0QXV9 152 aa12.79□□□□□ -0.36
CPNE9-205ENST00000613455 MRPL55Q7Z7F7 128 aaKnown RBP12.79□□□□□ -0.36
CPNE9-205ENST00000613455 PKHD1P08F94 4074 aa12.79□□□□□ -0.36
CPNE9-205ENST00000613455 RPL28P46779 137 aaKnown RBP12.78□□□□□ -0.36
CPNE9-205ENST00000613455 A0A1B0GV90 55 aa12.77□□□□□ -0.36
CPNE9-205ENST00000613455 LINC00167Q96N53 147 aa12.77□□□□□ -0.36
CPNE9-205ENST00000613455 EPM2AB3EWF7 344 aa12.76□□□□□ -0.37
CPNE9-205ENST00000613455 PSMB2P49721 201 aa12.76□□□□□ -0.37
CPNE9-205ENST00000613455 KRTAP10-1P60331 282 aa12.76□□□□□ -0.37
CPNE9-205ENST00000613455 A0A087WYN8 130 aa12.75□□□□□ -0.37
CPNE9-205ENST00000613455 TRAV23DV6A0A075B6W5 121 aa12.74□□□□□ -0.37
CPNE9-205ENST00000613455 DPH3Q96FX2 82 aa12.74□□□□□ -0.37
CPNE9-205ENST00000613455 IGLV1-50A0A075B6I6 118 aa12.74□□□□□ -0.37
CPNE9-205ENST00000613455 RPL37AP8A6NKH3 93 aa12.74□□□□□ -0.37
CPNE9-205ENST00000613455 FAM30AQ9NZY2 134 aa12.74□□□□□ -0.37
CPNE9-205ENST00000613455 FABP2P12104 132 aa12.73□□□□□ -0.37
CPNE9-205ENST00000613455 Q6ZSA8 131 aa12.73□□□□□ -0.37
CPNE9-205ENST00000613455 PHF5AQ7RTV0 110 aaKnown RBP12.73□□□□□ -0.37
CPNE9-205ENST00000613455 KCNQ1DNQ9H478 68 aa12.72□□□□□ -0.37
CPNE9-205ENST00000613455 PLAC8Q9NZF1 115 aa12.72□□□□□ -0.37
CPNE9-205ENST00000613455 C6orf99Q4VX62 202 aa12.71□□□□□ -0.38
CPNE9-205ENST00000613455 SCGB1C2P0DMR2 95 aa12.7□□□□□ -0.38
CPNE9-205ENST00000613455 ZNF73O43830 326 aaPredicted RBP12.69□□□□□ -0.38
CPNE9-205ENST00000613455 LRP1BQ9NZR2 4599 aa12.69□□□□□ -0.38
CPNE9-205ENST00000613455 COX6CP09669 75 aa12.68□□□□□ -0.38
CPNE9-205ENST00000613455 VAMP3Q15836 100 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms