RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 NAV2Q8IVL1 2488 aa5.94□□□□□ -1.46
PDE6A-204ENST00000613228 MED13LQ71F56 2210 aa5.94□□□□□ -1.46
PDE6A-204ENST00000613228 TRANK1O15050 2925 aa5.94□□□□□ -1.46
PDE6A-204ENST00000613228 IGKV2-28A0A075B6P5 120 aa5.93□□□□□ -1.46
PDE6A-204ENST00000613228 IGKV2D-28P01615 120 aa5.93□□□□□ -1.46
PDE6A-204ENST00000613228 ELOF1P60002 83 aaKnown RBP5.93□□□□□ -1.46
PDE6A-204ENST00000613228 FP248Q71RG6 208 aaPredicted RBP5.93□□□□□ -1.46
PDE6A-204ENST00000613228 C1orf64Q8NEQ6 169 aa5.93□□□□□ -1.46
PDE6A-204ENST00000613228 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.93□□□□□ -1.46
PDE6A-204ENST00000613228 DNAH10OSP0CZ25 163 aa5.93□□□□□ -1.46
PDE6A-204ENST00000613228 BDP1A6H8Y1 2624 aa5.93□□□□□ -1.46
PDE6A-204ENST00000613228 CHD7Q9P2D1 2997 aa5.92□□□□□ -1.46
PDE6A-204ENST00000613228 OXTP01178 125 aa5.92□□□□□ -1.46
PDE6A-204ENST00000613228 SPTAN1Q13813 2472 aaKnown RBP5.92□□□□□ -1.46
PDE6A-204ENST00000613228 LOC101927531A0A1B0GV80 90 aa5.91□□□□□ -1.46
PDE6A-204ENST00000613228 C1orf134Q5TEV5 83 aa5.9□□□□□ -1.46
PDE6A-204ENST00000613228 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.46
PDE6A-204ENST00000613228 KRTAP10-11P60412 298 aa5.9□□□□□ -1.46
PDE6A-204ENST00000613228 LY6G6CO95867 125 aa5.9□□□□□ -1.47
PDE6A-204ENST00000613228 C6orf48Q9UBA6 75 aa5.9□□□□□ -1.47
PDE6A-204ENST00000613228 HIVEP3Q5T1R4 2406 aa5.9□□□□□ -1.47
PDE6A-204ENST00000613228 RPL37AP8A6NKH3 93 aa5.89□□□□□ -1.47
PDE6A-204ENST00000613228 C1orf137Q5JT78 98 aa5.89□□□□□ -1.47
PDE6A-204ENST00000613228 ZNF575Q86XF7 245 aa5.89□□□□□ -1.47
PDE6A-204ENST00000613228 EIF4EBP3O60516 100 aaPredicted RBP5.89□□□□□ -1.47
PDE6A-204ENST00000613228 PRR34Q9NV39 138 aa5.89□□□□□ -1.47
PDE6A-204ENST00000613228 IGLV5-52A0A0A0MRZ9 124 aa5.89□□□□□ -1.47
PDE6A-204ENST00000613228 CYSTM1Q9H1C7 97 aa5.89□□□□□ -1.47
PDE6A-204ENST00000613228 OBSCN-AS1Q96MR7 158 aa5.88□□□□□ -1.47
PDE6A-204ENST00000613228 CREBBPQ92793 2442 aa5.88□□□□□ -1.47
PDE6A-204ENST00000613228 PIEZO2Q9H5I5 2752 aa5.88□□□□□ -1.47
PDE6A-204ENST00000613228 DOPEY1Q5JWR5 2465 aa5.87□□□□□ -1.47
PDE6A-204ENST00000613228 M0R2N4 97 aa5.87□□□□□ -1.47
PDE6A-204ENST00000613228 LINC00588Q9Y4M8 146 aa5.87□□□□□ -1.47
PDE6A-204ENST00000613228 PRR3P79522 188 aaKnown RBP5.87□□□□□ -1.47
PDE6A-204ENST00000613228 C22orf24Q9Y442 160 aa5.86□□□□□ -1.47
PDE6A-204ENST00000613228 TRBV7-4A0A0J9YYF1 115 aa5.86□□□□□ -1.47
PDE6A-204ENST00000613228 UTRNP46939 3433 aa5.85□□□□□ -1.47
PDE6A-204ENST00000613228 PCOTHQ58A44 107 aa5.85□□□□□ -1.47
PDE6A-204ENST00000613228 ATRXP46100 2492 aa5.85□□□□□ -1.47
PDE6A-204ENST00000613228 NBDYA0A0U1RRE5 68 aa5.84□□□□□ -1.47
PDE6A-204ENST00000613228 A0A1B0GU69 56 aa5.84□□□□□ -1.47
PDE6A-204ENST00000613228 C16orf90A8MZG2 172 aa5.84□□□□□ -1.47
PDE6A-204ENST00000613228 K7EIL1 84 aa5.84□□□□□ -1.47
PDE6A-204ENST00000613228 IGLV6-57P01721 117 aa5.84□□□□□ -1.48
PDE6A-204ENST00000613228 COA5Q86WW8 74 aa5.84□□□□□ -1.48
PDE6A-204ENST00000613228 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.48
PDE6A-204ENST00000613228 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
PDE6A-204ENST00000613228 ANKRD11Q6UB99 2663 aaPredicted RBP5.82□□□□□ -1.48
PDE6A-204ENST00000613228 TLX1NBP0CAT3 122 aa5.82□□□□□ -1.48
PDE6A-204ENST00000613228 LINC00167Q96N53 147 aa5.82□□□□□ -1.48
PDE6A-204ENST00000613228 SPG11Q96JI7 2443 aa5.82□□□□□ -1.48
PDE6A-204ENST00000613228 Q9BRP9 147 aa5.81□□□□□ -1.48
PDE6A-204ENST00000613228 KIAA0087Q14695 138 aa5.81□□□□□ -1.48
PDE6A-204ENST00000613228 FAM229BQ4G0N7 80 aa5.81□□□□□ -1.48
PDE6A-204ENST00000613228 TP53AIP1Q9HCN2 124 aa5.81□□□□□ -1.48
PDE6A-204ENST00000613228 CSPG4Q6UVK1 2322 aa5.81□□□□□ -1.48
PDE6A-204ENST00000613228 Q75L30 129 aa5.8□□□□□ -1.48
PDE6A-204ENST00000613228 SPANXA2-OT1Q8N9U9 137 aa5.8□□□□□ -1.48
PDE6A-204ENST00000613228 Q6ZRX8 168 aa5.8□□□□□ -1.48
PDE6A-204ENST00000613228 CACNA1AO00555 2505 aa5.79□□□□□ -1.48
PDE6A-204ENST00000613228 DOPEY2Q9Y3R5 2298 aa5.79□□□□□ -1.48
PDE6A-204ENST00000613228 CEP295Q9C0D2 2601 aa5.78□□□□□ -1.48
PDE6A-204ENST00000613228 ACYP2P14621 99 aa5.78□□□□□ -1.48
PDE6A-204ENST00000613228 KCNQ1DNQ9H478 68 aa5.77□□□□□ -1.49
PDE6A-204ENST00000613228 ZNF462Q96JM2 2506 aa5.77□□□□□ -1.49
PDE6A-204ENST00000613228 PKD1L2Q7Z442 2459 aa5.77□□□□□ -1.49
PDE6A-204ENST00000613228 Q6ZRP5 223 aa5.77□□□□□ -1.49
PDE6A-204ENST00000613228 C15orf56Q8N910 161 aa5.77□□□□□ -1.49
PDE6A-204ENST00000613228 WWC2-AS2Q96NR7 200 aa5.77□□□□□ -1.49
PDE6A-204ENST00000613228 IGLV9-49A0A0B4J1Y8 123 aa5.76□□□□□ -1.49
PDE6A-204ENST00000613228 C9orf129Q5T035 196 aaKnown RBP5.76□□□□□ -1.49
PDE6A-204ENST00000613228 DEFB116Q30KQ4 102 aa5.75□□□□□ -1.49
PDE6A-204ENST00000613228 CR1P17927 2039 aa5.75□□□□□ -1.49
PDE6A-204ENST00000613228 OCR1Q9BZK8 76 aa5.75□□□□□ -1.49
PDE6A-204ENST00000613228 IGLV1-50A0A075B6I6 118 aa5.75□□□□□ -1.49
PDE6A-204ENST00000613228 RTL8CO15255 209 aa5.75□□□□□ -1.49
PDE6A-204ENST00000613228 CENPFP49454 3210 aa5.74□□□□□ -1.49
PDE6A-204ENST00000613228 Q8NBF4 154 aa5.74□□□□□ -1.49
PDE6A-204ENST00000613228 A0A096LNI7 61 aa5.74□□□□□ -1.49
PDE6A-204ENST00000613228 EPM2AB3EWF7 344 aa5.74□□□□□ -1.49
PDE6A-204ENST00000613228 IGLV5-37A0A075B6J1 123 aa5.74□□□□□ -1.49
PDE6A-204ENST00000613228 PHF5AQ7RTV0 110 aaKnown RBP5.74□□□□□ -1.49
PDE6A-204ENST00000613228 APLNQ9ULZ1 77 aa5.74□□□□□ -1.49
PDE6A-204ENST00000613228 A0A087WSZ3 146 aa5.73□□□□□ -1.49
PDE6A-204ENST00000613228 CNBPP62633 177 aaKnown RBP5.73□□□□□ -1.49
PDE6A-204ENST00000613228 FAM104AQ969W3 186 aa5.73□□□□□ -1.49
PDE6A-204ENST00000613228 UQCR11O14957 56 aa5.72□□□□□ -1.49
PDE6A-204ENST00000613228 PRLHP81277 87 aa5.72□□□□□ -1.49
PDE6A-204ENST00000613228 Q5VV11 94 aa5.72□□□□□ -1.49
PDE6A-204ENST00000613228 SPINT4Q6UDR6 99 aa5.72□□□□□ -1.49
PDE6A-204ENST00000613228 LINC00528Q8N1L1 170 aa5.71□□□□□ -1.5
PDE6A-204ENST00000613228 WDR87Q6ZQQ6 2873 aa5.71□□□□□ -1.5
PDE6A-204ENST00000613228 MIR22HGQ0VDD5 57 aa5.7□□□□□ -1.5
PDE6A-204ENST00000613228 CEP350Q5VT06 3117 aa5.7□□□□□ -1.5
PDE6A-204ENST00000613228 MUC4Q99102 2169 aa5.7□□□□□ -1.5
PDE6A-204ENST00000613228 RPL37AP61513 92 aaKnown RBP5.69□□□□□ -1.5
PDE6A-204ENST00000613228 K7EQZ3 153 aa5.69□□□□□ -1.5
PDE6A-204ENST00000613228 ANKRD17O75179 2603 aaKnown RBP5.69□□□□□ -1.5
PDE6A-204ENST00000613228 LINC00313P59037 77 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms