RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 H0Y9J4 135 aa7.64□□□□□ -1.19
CSTF1-208ENST00000613138 SMIM13P0DJ93 91 aa7.64□□□□□ -1.19
CSTF1-208ENST00000613138 VPREB1P12018 145 aa7.64□□□□□ -1.19
CSTF1-208ENST00000613138 PLA2G2DQ9UNK4 145 aa7.64□□□□□ -1.19
CSTF1-208ENST00000613138 IGLV5-37A0A075B6J1 123 aa7.63□□□□□ -1.19
CSTF1-208ENST00000613138 IGKV2-28A0A075B6P5 120 aa7.63□□□□□ -1.19
CSTF1-208ENST00000613138 IGKV2D-28P01615 120 aa7.63□□□□□ -1.19
CSTF1-208ENST00000613138 KRTAP1-4P0C5Y4 121 aa7.63□□□□□ -1.19
CSTF1-208ENST00000613138 LINC00158P58513 81 aa7.63□□□□□ -1.19
CSTF1-208ENST00000613138 COX17Q14061 63 aa7.63□□□□□ -1.19
CSTF1-208ENST00000613138 PRR26Q8N8Z3 221 aa7.63□□□□□ -1.19
CSTF1-208ENST00000613138 NKAPP1Q8N9T2 125 aa7.62□□□□□ -1.19
CSTF1-208ENST00000613138 HSPB8Q9UJY1 196 aa7.62□□□□□ -1.19
CSTF1-208ENST00000613138 TMA7Q9Y2S6 64 aaKnown RBP7.62□□□□□ -1.19
CSTF1-208ENST00000613138 NDUFA12Q9UI09 145 aa7.61□□□□□ -1.19
CSTF1-208ENST00000613138 TMEM238C9JI98 176 aa7.6□□□□□ -1.19
CSTF1-208ENST00000613138 ZNF861PO60384 105 aa7.6□□□□□ -1.19
CSTF1-208ENST00000613138 DPM2O94777 84 aa7.6□□□□□ -1.19
CSTF1-208ENST00000613138 DAND5Q8N907 189 aa7.6□□□□□ -1.19
CSTF1-208ENST00000613138 LEPROTO15243 131 aa7.59□□□□□ -1.19
CSTF1-208ENST00000613138 BCE1O60756 84 aa7.59□□□□□ -1.19
CSTF1-208ENST00000613138 IGKCP01834 107 aa7.59□□□□□ -1.19
CSTF1-208ENST00000613138 MEIG1Q5JSS6 88 aa7.59□□□□□ -1.19
CSTF1-208ENST00000613138 MIR7-3HGQ8N6C7 128 aa7.59□□□□□ -1.19
CSTF1-208ENST00000613138 LINC00587B1AMM8 73 aa7.58□□□□□ -1.2
CSTF1-208ENST00000613138 PLNP26678 52 aa7.58□□□□□ -1.2
CSTF1-208ENST00000613138 RPL24P83731 157 aaKnown RBP7.58□□□□□ -1.2
CSTF1-208ENST00000613138 MAP1LC3CQ9BXW4 147 aa7.58□□□□□ -1.2
CSTF1-208ENST00000613138 ANAPC11Q9NYG5 84 aa7.58□□□□□ -1.2
CSTF1-208ENST00000613138 IGLV1-50A0A075B6I6 118 aa7.57□□□□□ -1.2
CSTF1-208ENST00000613138 SYS1-DBNDD2H3BUS1 97 aa7.57□□□□□ -1.2
CSTF1-208ENST00000613138 J3QQQ9 107 aa7.57□□□□□ -1.2
CSTF1-208ENST00000613138 PRLHP81277 87 aa7.57□□□□□ -1.2
CSTF1-208ENST00000613138 NCR3O14931 201 aa7.56□□□□□ -1.2
CSTF1-208ENST00000613138 RPL28P46779 137 aaKnown RBP7.56□□□□□ -1.2
CSTF1-208ENST00000613138 KRTAP13-1Q8IUC0 172 aa7.56□□□□□ -1.2
CSTF1-208ENST00000613138 MYMXA0A1B0GTQ4 84 aa7.55□□□□□ -1.2
CSTF1-208ENST00000613138 M0R378 163 aa7.55□□□□□ -1.2
CSTF1-208ENST00000613138 EIF4EBP3O60516 100 aaPredicted RBP7.55□□□□□ -1.2
CSTF1-208ENST00000613138 RPL13AP40429 203 aaKnown RBP7.55□□□□□ -1.2
CSTF1-208ENST00000613138 BOD1L2Q8IYS8 172 aa7.55□□□□□ -1.2
CSTF1-208ENST00000613138 PLEKHB2Q96CS7 222 aa7.55□□□□□ -1.2
CSTF1-208ENST00000613138 C3orf79P0CE67 100 aa7.54□□□□□ -1.2
CSTF1-208ENST00000613138 UBE2AP49459 152 aa7.54□□□□□ -1.2
CSTF1-208ENST00000613138 HERV-K104P63124 156 aa7.54□□□□□ -1.2
CSTF1-208ENST00000613138 TTTY13Q9BZ97 58 aa7.54□□□□□ -1.2
CSTF1-208ENST00000613138 TMEM126AQ9H061 195 aa7.54□□□□□ -1.2
CSTF1-208ENST00000613138 A0A087X002 238 aa7.53□□□□□ -1.2
CSTF1-208ENST00000613138 LGALS3P17931 250 aaKnown RBP7.53□□□□□ -1.2
CSTF1-208ENST00000613138 HERVK_113P61574 105 aa7.53□□□□□ -1.2
CSTF1-208ENST00000613138 NPC2P61916 151 aa7.53□□□□□ -1.2
CSTF1-208ENST00000613138 COA6Q5JTJ3 125 aaKnown RBP7.53□□□□□ -1.2
CSTF1-208ENST00000613138 LINC01545Q5VT33 79 aa7.53□□□□□ -1.2
CSTF1-208ENST00000613138 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
CSTF1-208ENST00000613138 LRP2P98164 4655 aa7.53□□□□□ -1.2
CSTF1-208ENST00000613138 IGKV2D-26A0A0A0MRZ7 120 aa7.52□□□□□ -1.21
CSTF1-208ENST00000613138 KRTDAPP60985 99 aa7.52□□□□□ -1.21
CSTF1-208ENST00000613138 ADAMTSL4-AS1Q5T5F5 129 aa7.52□□□□□ -1.21
CSTF1-208ENST00000613138 SOSTDC1Q6X4U4 206 aa7.52□□□□□ -1.21
CSTF1-208ENST00000613138 UBR4Q5T4S7 5183 aa7.52□□□□□ -1.21
CSTF1-208ENST00000613138 E9PLD3 99 aa7.51□□□□□ -1.21
CSTF1-208ENST00000613138 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
CSTF1-208ENST00000613138 LOC105371267A0A1B0GV96 52 aa7.5□□□□□ -1.21
CSTF1-208ENST00000613138 PET117Q6UWS5 81 aa7.5□□□□□ -1.21
CSTF1-208ENST00000613138 TRBV10-3A0A0K0K1G6 114 aa7.49□□□□□ -1.21
CSTF1-208ENST00000613138 KRTAP13-2Q52LG2 175 aa7.49□□□□□ -1.21
CSTF1-208ENST00000613138 ATOH7Q8N100 152 aa7.49□□□□□ -1.21
CSTF1-208ENST00000613138 LPAP08519 4548 aa7.48□□□□□ -1.21
CSTF1-208ENST00000613138 S100A6P06703 90 aa7.48□□□□□ -1.21
CSTF1-208ENST00000613138 NMUP48645 174 aa7.48□□□□□ -1.21
CSTF1-208ENST00000613138 S100A12P80511 92 aa7.47□□□□□ -1.21
CSTF1-208ENST00000613138 LITAFQ99732 161 aa7.47□□□□□ -1.21
CSTF1-208ENST00000613138 C5orf52A6NGY3 159 aa7.46□□□□□ -1.22
CSTF1-208ENST00000613138 ANKRD39Q53RE8 183 aa7.46□□□□□ -1.22
CSTF1-208ENST00000613138 HIGD2AQ9BW72 106 aa7.46□□□□□ -1.22
CSTF1-208ENST00000613138 LOC107984156A0A0G2JMH3 177 aa7.45□□□□□ -1.22
CSTF1-208ENST00000613138 CRYGAP11844 174 aa7.45□□□□□ -1.22
CSTF1-208ENST00000613138 ARL17AQ8IVW1 177 aa7.45□□□□□ -1.22
CSTF1-208ENST00000613138 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
CSTF1-208ENST00000613138 KRTAP4-16G5E9R7 235 aaPredicted RBP7.44□□□□□ -1.22
CSTF1-208ENST00000613138 PRYO14603 147 aa7.44□□□□□ -1.22
CSTF1-208ENST00000613138 TSPAN13O95857 204 aa7.44□□□□□ -1.22
CSTF1-208ENST00000613138 SNRPEP62304 92 aaKnown RBP7.44□□□□□ -1.22
CSTF1-208ENST00000613138 HIST3H2BBQ8N257 126 aa7.44□□□□□ -1.22
CSTF1-208ENST00000613138 KCNQ1DNQ9H478 68 aa7.44□□□□□ -1.22
CSTF1-208ENST00000613138 SPRR1AP35321 89 aa7.43□□□□□ -1.22
CSTF1-208ENST00000613138 C3orf22Q8N5N4 141 aa7.43□□□□□ -1.22
CSTF1-208ENST00000613138 DDTP30046 118 aa7.42□□□□□ -1.22
CSTF1-208ENST00000613138 FAM229BQ4G0N7 80 aa7.42□□□□□ -1.22
CSTF1-208ENST00000613138 TYMSOSQ8TAI1 123 aa7.42□□□□□ -1.22
CSTF1-208ENST00000613138 HIST1H2BLQ99880 126 aa7.42□□□□□ -1.22
CSTF1-208ENST00000613138 ERC2-IT1O76042 136 aa7.41□□□□□ -1.22
CSTF1-208ENST00000613138 PCP2Q8IVA1 136 aa7.41□□□□□ -1.22
CSTF1-208ENST00000613138 LINC00308Q8TCZ7 52 aa7.41□□□□□ -1.22
CSTF1-208ENST00000613138 SMCR5Q8TEV8 140 aa7.41□□□□□ -1.22
CSTF1-208ENST00000613138 MIEN1Q9BRT3 115 aa7.41□□□□□ -1.22
CSTF1-208ENST00000613138 SPANXB1Q9NS25 103 aaPredicted RBP7.41□□□□□ -1.22
CSTF1-208ENST00000613138 ETDCA0A1B0GVM5 59 aa7.4□□□□□ -1.22
CSTF1-208ENST00000613138 SPRR4Q96PI1 79 aa7.4□□□□□ -1.22
CSTF1-208ENST00000613138 PPDPFQ9H3Y8 114 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms