RNA–Protein interactions for RNA: ENST00000612779.1

HOXA2-202, Transcript of homeobox A2, humanhuman

Gene HOXA2, Length 1,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2-202ENST00000612779 SPAG11BQ08648 103 aa12.63□□□□□ -0.39
HOXA2-202ENST00000612779 CFAP161Q6P656 301 aa12.63□□□□□ -0.39
HOXA2-202ENST00000612779 COX6CP09669 75 aa12.62□□□□□ -0.39
HOXA2-202ENST00000612779 PLECQ15149 4684 aaKnown RBP12.62□□□□□ -0.39
HOXA2-202ENST00000612779 STARD9Q9P2P6 4700 aa12.62□□□□□ -0.39
HOXA2-202ENST00000612779 A0A0U1RRA0 63 aa12.61□□□□□ -0.39
HOXA2-202ENST00000612779 C15orf56Q8N910 161 aa12.61□□□□□ -0.39
HOXA2-202ENST00000612779 TENM2Q9NT68 2774 aa12.61□□□□□ -0.39
HOXA2-202ENST00000612779 C6orf223Q8N319 242 aa12.61□□□□□ -0.39
HOXA2-202ENST00000612779 LYSTQ99698 3801 aa12.61□□□□□ -0.39
HOXA2-202ENST00000612779 LINC00526Q96FQ7 95 aa12.6□□□□□ -0.39
HOXA2-202ENST00000612779 LST1O00453 97 aa12.6□□□□□ -0.39
HOXA2-202ENST00000612779 MUC7Q8TAX7 377 aa12.59□□□□□ -0.39
HOXA2-202ENST00000612779 CCDC179H3BU77 68 aa12.58□□□□□ -0.4
HOXA2-202ENST00000612779 NPC2P61916 151 aa12.58□□□□□ -0.4
HOXA2-202ENST00000612779 SOSTDC1Q6X4U4 206 aa12.58□□□□□ -0.4
HOXA2-202ENST00000612779 LINC00308Q8TCZ7 52 aa12.58□□□□□ -0.4
HOXA2-202ENST00000612779 C10orf25Q5T742 122 aa12.58□□□□□ -0.4
HOXA2-202ENST00000612779 UNQ6190/PRO20217Q6UXQ8 127 aa12.57□□□□□ -0.4
HOXA2-202ENST00000612779 RMI2Q96E14 147 aa12.57□□□□□ -0.4
HOXA2-202ENST00000612779 C3orf84H3BNL1 204 aa12.56□□□□□ -0.4
HOXA2-202ENST00000612779 CASC10Q5T4H9 136 aa12.56□□□□□ -0.4
HOXA2-202ENST00000612779 MIR7-3HGQ8N6C7 128 aa12.56□□□□□ -0.4
HOXA2-202ENST00000612779 PPDPFQ9H3Y8 114 aa12.56□□□□□ -0.4
HOXA2-202ENST00000612779 LINC00158P58513 81 aa12.56□□□□□ -0.4
HOXA2-202ENST00000612779 HIGD2BQ4VC39 106 aa12.56□□□□□ -0.4
HOXA2-202ENST00000612779 TRBV7-7A0A0K0K1E9 115 aa12.55□□□□□ -0.4
HOXA2-202ENST00000612779 PFN2P35080 140 aa12.55□□□□□ -0.4
HOXA2-202ENST00000612779 GVQW2A0A096LPI5 108 aaPredicted RBP12.54□□□□□ -0.4
HOXA2-202ENST00000612779 C9orf116Q5BN46 136 aaPredicted RBP12.54□□□□□ -0.4
HOXA2-202ENST00000612779 CLEC2BQ92478 149 aa12.54□□□□□ -0.4
HOXA2-202ENST00000612779 ZNF561-AS1K7EIQ3 104 aa12.53□□□□□ -0.4
HOXA2-202ENST00000612779 COX17Q14061 63 aa12.53□□□□□ -0.4
HOXA2-202ENST00000612779 VPS13DQ5THJ4 4388 aa12.53□□□□□ -0.4
HOXA2-202ENST00000612779 C2orf48Q96LS8 159 aa12.52□□□□□ -0.4
HOXA2-202ENST00000612779 NBDYA0A0U1RRE5 68 aa12.52□□□□□ -0.41
HOXA2-202ENST00000612779 COPS9Q8WXC6 57 aa12.51□□□□□ -0.41
HOXA2-202ENST00000612779 C6orf48Q9UBA6 75 aa12.51□□□□□ -0.41
HOXA2-202ENST00000612779 ACYP1P07311 99 aa12.5□□□□□ -0.41
HOXA2-202ENST00000612779 USP17L23D6RBM5 183 aa12.49□□□□□ -0.41
HOXA2-202ENST00000612779 CAMK2N2Q96S95 79 aa12.49□□□□□ -0.41
HOXA2-202ENST00000612779 F8WDY8 70 aa12.49□□□□□ -0.41
HOXA2-202ENST00000612779 IMUPQ9GZP8 106 aa12.49□□□□□ -0.41
HOXA2-202ENST00000612779 Q6ZRU5 148 aa12.48□□□□□ -0.41
HOXA2-202ENST00000612779 SLPIP03973 132 aa12.45□□□□□ -0.42
HOXA2-202ENST00000612779 SND1-IT1Q9HBX3 110 aa12.44□□□□□ -0.42
HOXA2-202ENST00000612779 SYCNQ0VAF6 134 aa12.43□□□□□ -0.42
HOXA2-202ENST00000612779 LECT2O14960 151 aa12.43□□□□□ -0.42
HOXA2-202ENST00000612779 Q6ZRN7 208 aaPredicted RBP12.42□□□□□ -0.42
HOXA2-202ENST00000612779 TMEM126AQ9H061 195 aa12.42□□□□□ -0.42
HOXA2-202ENST00000612779 IGKV2-28A0A075B6P5 120 aa12.41□□□□□ -0.42
HOXA2-202ENST00000612779 IGKV2D-28P01615 120 aa12.41□□□□□ -0.42
HOXA2-202ENST00000612779 SMIM20Q8N5G0 67 aa12.41□□□□□ -0.42
HOXA2-202ENST00000612779 TRACP01848 142 aa12.4□□□□□ -0.42
HOXA2-202ENST00000612779 SDIM1Q6ZPB5 146 aa12.4□□□□□ -0.42
HOXA2-202ENST00000612779 Q6ZR54 194 aa12.4□□□□□ -0.42
HOXA2-202ENST00000612779 DNAH10Q8IVF4 4471 aa12.4□□□□□ -0.42
HOXA2-202ENST00000612779 PSCAO43653 123 aa12.39□□□□□ -0.43
HOXA2-202ENST00000612779 LINC00643Q86TS7 51 aa12.39□□□□□ -0.43
HOXA2-202ENST00000612779 M0R2N4 97 aa12.39□□□□□ -0.43
HOXA2-202ENST00000612779 NDUFC2-KCTD14E9PQ53 114 aa12.38□□□□□ -0.43
HOXA2-202ENST00000612779 LINC00337Q8N6G1 96 aa12.38□□□□□ -0.43
HOXA2-202ENST00000612779 Q8NDZ9 215 aa12.38□□□□□ -0.43
HOXA2-202ENST00000612779 FAM236AA0A1B0GUQ0 79 aa12.36□□□□□ -0.43
HOXA2-202ENST00000612779 FAM236BA0A1B0GV22 79 aa12.36□□□□□ -0.43
HOXA2-202ENST00000612779 NDUFC2O95298 119 aa12.36□□□□□ -0.43
HOXA2-202ENST00000612779 LRCOL1A6NCL2 159 aa12.36□□□□□ -0.43
HOXA2-202ENST00000612779 LINC00476Q8WZB0 136 aa12.36□□□□□ -0.43
HOXA2-202ENST00000612779 SMCR5Q8TEV8 140 aa12.35□□□□□ -0.43
HOXA2-202ENST00000612779 TLX1NBP0CAT3 122 aa12.34□□□□□ -0.43
HOXA2-202ENST00000612779 Q6ZRP5 223 aa12.34□□□□□ -0.43
HOXA2-202ENST00000612779 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
HOXA2-202ENST00000612779 XAGE1AQ9HD64 81 aa12.34□□□□□ -0.43
HOXA2-202ENST00000612779 LY6G6CO95867 125 aa12.33□□□□□ -0.44
HOXA2-202ENST00000612779 PRR3P79522 188 aaKnown RBP12.32□□□□□ -0.44
HOXA2-202ENST00000612779 CNBPP62633 177 aaKnown RBP12.32□□□□□ -0.44
HOXA2-202ENST00000612779 C22orf24Q9Y442 160 aa12.32□□□□□ -0.44
HOXA2-202ENST00000612779 BAALC-AS2P0C853 105 aa12.31□□□□□ -0.44
HOXA2-202ENST00000612779 INAFM2P0DMQ5 153 aa12.31□□□□□ -0.44
HOXA2-202ENST00000612779 C14orf177Q52M58 125 aa12.3□□□□□ -0.44
HOXA2-202ENST00000612779 C3orf22Q8N5N4 141 aa12.3□□□□□ -0.44
HOXA2-202ENST00000612779 KMT2AQ03164 3969 aa12.29□□□□□ -0.44
HOXA2-202ENST00000612779 UQCRQO14949 82 aa12.29□□□□□ -0.44
HOXA2-202ENST00000612779 ALMS1Q8TCU4 4167 aa12.28□□□□□ -0.44
HOXA2-202ENST00000612779 DNAH6Q9C0G6 4158 aa12.28□□□□□ -0.44
HOXA2-202ENST00000612779 C9orf129Q5T035 196 aaKnown RBP12.28□□□□□ -0.44
HOXA2-202ENST00000612779 RPL28P46779 137 aaKnown RBP12.27□□□□□ -0.44
HOXA2-202ENST00000612779 FAM218AQ96MZ4 157 aa12.27□□□□□ -0.44
HOXA2-202ENST00000612779 NCR3O14931 201 aa12.26□□□□□ -0.45
HOXA2-202ENST00000612779 VPREB1P12018 145 aa12.26□□□□□ -0.45
HOXA2-202ENST00000612779 RPL18AQ02543 176 aaKnown RBP12.26□□□□□ -0.45
HOXA2-202ENST00000612779 C9orf153Q5TBE3 101 aa12.26□□□□□ -0.45
HOXA2-202ENST00000612779 LCE6AA0A183 80 aa12.25□□□□□ -0.45
HOXA2-202ENST00000612779 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.25□□□□□ -0.45
HOXA2-202ENST00000612779 OR13C6PQ8NH95 151 aa12.25□□□□□ -0.45
HOXA2-202ENST00000612779 LOC107984640A0A0U1RRK4 108 aa12.24□□□□□ -0.45
HOXA2-202ENST00000612779 SMIM11BQ8TCY0 68 aa12.24□□□□□ -0.45
HOXA2-202ENST00000612779 HIST1H4AP62805 103 aaKnown RBP12.23□□□□□ -0.45
HOXA2-202ENST00000612779 A0A087WTM6 91 aa12.23□□□□□ -0.45
HOXA2-202ENST00000612779 C1orf134Q5TEV5 83 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms