RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ENHOQ6UWT2 76 aa9.58□□□□□ -0.88
COL6A1-207ENST00000612273 PPDPFQ9H3Y8 114 aa9.58□□□□□ -0.88
COL6A1-207ENST00000612273 FBN1P35555 2871 aaKnown RBP9.58□□□□□ -0.88
COL6A1-207ENST00000612273 LINC01561Q8N1V8 128 aa9.57□□□□□ -0.88
COL6A1-207ENST00000612273 M0R2N4 97 aa9.57□□□□□ -0.88
COL6A1-207ENST00000612273 COX7CP15954 63 aa9.56□□□□□ -0.88
COL6A1-207ENST00000612273 USP17L23D6RBM5 183 aa9.56□□□□□ -0.88
COL6A1-207ENST00000612273 LY6G6DO95868 133 aa9.56□□□□□ -0.88
COL6A1-207ENST00000612273 BAHCC1Q9P281 2608 aa9.55□□□□□ -0.88
COL6A1-207ENST00000612273 TENM3Q9P273 2699 aa9.55□□□□□ -0.88
COL6A1-207ENST00000612273 HAMPP81172 84 aa9.55□□□□□ -0.88
COL6A1-207ENST00000612273 CCKP06307 115 aa9.54□□□□□ -0.88
COL6A1-207ENST00000612273 Q6ZQY7 126 aa9.54□□□□□ -0.88
COL6A1-207ENST00000612273 ATOX1O00244 68 aa9.54□□□□□ -0.88
COL6A1-207ENST00000612273 LINC00612Q8N6U2 182 aa9.53□□□□□ -0.88
COL6A1-207ENST00000612273 RETNQ9HD89 108 aa9.53□□□□□ -0.88
COL6A1-207ENST00000612273 TMEM256-PLSCR3K7ERE1 68 aa9.53□□□□□ -0.88
COL6A1-207ENST00000612273 NBEAL1Q6ZS30 2694 aa9.53□□□□□ -0.88
COL6A1-207ENST00000612273 SCXQ7RTU7 201 aa9.53□□□□□ -0.88
COL6A1-207ENST00000612273 C2orf48Q96LS8 159 aa9.52□□□□□ -0.89
COL6A1-207ENST00000612273 LYRM9A8MSI8 78 aa9.52□□□□□ -0.89
COL6A1-207ENST00000612273 Q6JHZ5 121 aa9.52□□□□□ -0.89
COL6A1-207ENST00000612273 OBSCN-AS1Q96MR7 158 aa9.51□□□□□ -0.89
COL6A1-207ENST00000612273 TRBV10-3A0A0K0K1G6 114 aa9.51□□□□□ -0.89
COL6A1-207ENST00000612273 C9orf66Q5T8R8 295 aa9.5□□□□□ -0.89
COL6A1-207ENST00000612273 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
COL6A1-207ENST00000612273 JMJD7-PLA2G4BH0Y9G9 81 aa9.5□□□□□ -0.89
COL6A1-207ENST00000612273 SPART-AS1P0CW21 52 aa9.5□□□□□ -0.89
COL6A1-207ENST00000612273 RBM3P98179 157 aaKnown RBP9.5□□□□□ -0.89
COL6A1-207ENST00000612273 COL6A5A8TX70 2615 aa9.49□□□□□ -0.89
COL6A1-207ENST00000612273 J3QKU1 62 aa9.49□□□□□ -0.89
COL6A1-207ENST00000612273 GHRHP01286 108 aa9.49□□□□□ -0.89
COL6A1-207ENST00000612273 APOC4P55056 127 aa9.49□□□□□ -0.89
COL6A1-207ENST00000612273 LINC00575Q6W349 94 aa9.49□□□□□ -0.89
COL6A1-207ENST00000612273 UBL5Q9BZL1 73 aa9.49□□□□□ -0.89
COL6A1-207ENST00000612273 WFDC10BQ8IUB3 73 aa9.49□□□□□ -0.89
COL6A1-207ENST00000612273 DSCR8Q96T75 97 aa9.49□□□□□ -0.89
COL6A1-207ENST00000612273 IGHV4-30-4P0DP06 118 aa9.48□□□□□ -0.89
COL6A1-207ENST00000612273 Q8NAQ8 132 aa9.48□□□□□ -0.89
COL6A1-207ENST00000612273 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
COL6A1-207ENST00000612273 COX17Q14061 63 aa9.47□□□□□ -0.89
COL6A1-207ENST00000612273 ZNF561-AS1K7EIQ3 104 aa9.46□□□□□ -0.89
COL6A1-207ENST00000612273 NDUFC2O95298 119 aa9.46□□□□□ -0.89
COL6A1-207ENST00000612273 SERP2Q8N6R1 65 aa9.46□□□□□ -0.89
COL6A1-207ENST00000612273 UPK3BQ9BT76 320 aa9.46□□□□□ -0.89
COL6A1-207ENST00000612273 C6orf48Q9UBA6 75 aa9.46□□□□□ -0.89
COL6A1-207ENST00000612273 C20orf197Q8N268 126 aa9.46□□□□□ -0.9
COL6A1-207ENST00000612273 CAMK2N2Q96S95 79 aa9.46□□□□□ -0.9
COL6A1-207ENST00000612273 LELP1Q5T871 98 aa9.45□□□□□ -0.9
COL6A1-207ENST00000612273 LYPD5Q6UWN5 251 aa9.43□□□□□ -0.9
COL6A1-207ENST00000612273 DEFB105AQ8NG35 78 aa9.42□□□□□ -0.9
COL6A1-207ENST00000612273 CRYGAP11844 174 aa9.42□□□□□ -0.9
COL6A1-207ENST00000612273 DIRC1Q969H9 104 aa9.41□□□□□ -0.9
COL6A1-207ENST00000612273 MIFP14174 115 aa9.41□□□□□ -0.9
COL6A1-207ENST00000612273 Q6ZQT0 140 aa9.41□□□□□ -0.9
COL6A1-207ENST00000612273 Q6ZTC4 211 aa9.41□□□□□ -0.9
COL6A1-207ENST00000612273 KPRPQ5T749 579 aaPredicted RBP9.41□□□□□ -0.9
COL6A1-207ENST00000612273 LINC00167Q96N53 147 aa9.41□□□□□ -0.9
COL6A1-207ENST00000612273 IGKV2D-24A0A075B6R9 120 aa9.4□□□□□ -0.9
COL6A1-207ENST00000612273 ZNF73O43830 326 aaPredicted RBP9.4□□□□□ -0.9
COL6A1-207ENST00000612273 Q6ZRU5 148 aa9.4□□□□□ -0.9
COL6A1-207ENST00000612273 FAM19A5Q7Z5A7 132 aaPredicted RBP9.39□□□□□ -0.91
COL6A1-207ENST00000612273 Q8N9L7 120 aa9.39□□□□□ -0.91
COL6A1-207ENST00000612273 SNURFQ9Y675 71 aa9.39□□□□□ -0.91
COL6A1-207ENST00000612273 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.39□□□□□ -0.91
COL6A1-207ENST00000612273 Q6ZVQ6 151 aa9.39□□□□□ -0.91
COL6A1-207ENST00000612273 IGLV6-57P01721 117 aa9.38□□□□□ -0.91
COL6A1-207ENST00000612273 LINC01547P58512 204 aaPredicted RBP9.38□□□□□ -0.91
COL6A1-207ENST00000612273 TRAV10A0A0B4J240 114 aa9.37□□□□□ -0.91
COL6A1-207ENST00000612273 A0A0J9YWU9 116 aa9.37□□□□□ -0.91
COL6A1-207ENST00000612273 J3KT08 172 aa9.37□□□□□ -0.91
COL6A1-207ENST00000612273 COX7BP24311 80 aa9.37□□□□□ -0.91
COL6A1-207ENST00000612273 PRR34Q9NV39 138 aa9.36□□□□□ -0.91
COL6A1-207ENST00000612273 MUC7Q8TAX7 377 aa9.35□□□□□ -0.91
COL6A1-207ENST00000612273 PRB2P02812 416 aaPredicted RBP9.35□□□□□ -0.91
COL6A1-207ENST00000612273 KMT2BQ9UMN6 2715 aaPredicted RBP9.35□□□□□ -0.91
COL6A1-207ENST00000612273 MGAM2Q2M2H8 2515 aa9.35□□□□□ -0.91
COL6A1-207ENST00000612273 C3orf84H3BNL1 204 aa9.34□□□□□ -0.91
COL6A1-207ENST00000612273 ESRGQ1W209 222 aa9.33□□□□□ -0.92
COL6A1-207ENST00000612273 DPH3Q96FX2 82 aa9.33□□□□□ -0.92
COL6A1-207ENST00000612273 C1orf43Q9BWL3 253 aa9.33□□□□□ -0.92
COL6A1-207ENST00000612273 RPL37AP8A6NKH3 93 aa9.32□□□□□ -0.92
COL6A1-207ENST00000612273 OXTP01178 125 aa9.32□□□□□ -0.92
COL6A1-207ENST00000612273 Q6ZRP5 223 aa9.32□□□□□ -0.92
COL6A1-207ENST00000612273 VPREB1P12018 145 aa9.31□□□□□ -0.92
COL6A1-207ENST00000612273 ATP5EP2Q5VTU8 51 aa9.3□□□□□ -0.92
COL6A1-207ENST00000612273 RMI2Q96E14 147 aa9.3□□□□□ -0.92
COL6A1-207ENST00000612273 C15orf56Q8N910 161 aa9.29□□□□□ -0.92
COL6A1-207ENST00000612273 TMEM258P61165 79 aa9.29□□□□□ -0.92
COL6A1-207ENST00000612273 KRTAP10-11P60412 298 aa9.28□□□□□ -0.92
COL6A1-207ENST00000612273 ELOF1P60002 83 aaKnown RBP9.27□□□□□ -0.92
COL6A1-207ENST00000612273 TM2D3Q9BRN9 247 aa9.27□□□□□ -0.92
COL6A1-207ENST00000612273 LOC110117498A0A087WWA1 95 aa9.27□□□□□ -0.93
COL6A1-207ENST00000612273 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.93
COL6A1-207ENST00000612273 CSMD3Q7Z407 3707 aa9.27□□□□□ -0.93
COL6A1-207ENST00000612273 DEFB131BA0A096LNP1 70 aa9.27□□□□□ -0.93
COL6A1-207ENST00000612273 NDUFC2-KCTD14E9PQ53 114 aa9.27□□□□□ -0.93
COL6A1-207ENST00000612273 M0R378 163 aa9.26□□□□□ -0.93
COL6A1-207ENST00000612273 SERTAD4-AS1Q5TG53 156 aa9.26□□□□□ -0.93
COL6A1-207ENST00000612273 MRAPQ8TCY5 172 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms