RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 A0A096LNJ9 63 aa7.62□□□□□ -1.19
HMGB1P24-201ENST00000611897 TMEM218A2RU14 115 aa7.62□□□□□ -1.19
HMGB1P24-201ENST00000611897 LINC00337Q8N6G1 96 aa7.62□□□□□ -1.19
HMGB1P24-201ENST00000611897 SPRR4Q96PI1 79 aa7.62□□□□□ -1.19
HMGB1P24-201ENST00000611897 MUC17Q685J3 4493 aa7.62□□□□□ -1.19
HMGB1P24-201ENST00000611897 NCR3O14931 201 aa7.61□□□□□ -1.19
HMGB1P24-201ENST00000611897 HBDP02042 147 aa7.61□□□□□ -1.19
HMGB1P24-201ENST00000611897 CLLU1Q5K131 121 aa7.61□□□□□ -1.19
HMGB1P24-201ENST00000611897 SPAG11AQ6PDA7 123 aa7.61□□□□□ -1.19
HMGB1P24-201ENST00000611897 BAGE3Q86Y29 109 aa7.61□□□□□ -1.19
HMGB1P24-201ENST00000611897 Q8NBF4 154 aa7.61□□□□□ -1.19
HMGB1P24-201ENST00000611897 ZNF706Q9Y5V0 76 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P24-201ENST00000611897 ATP6V1G1O75348 118 aa7.6□□□□□ -1.19
HMGB1P24-201ENST00000611897 COX19Q49B96 90 aa7.6□□□□□ -1.19
HMGB1P24-201ENST00000611897 UQCC3Q6UW78 93 aa7.59□□□□□ -1.19
HMGB1P24-201ENST00000611897 SEC11CQ9BY50 192 aa7.59□□□□□ -1.19
HMGB1P24-201ENST00000611897 CTAG1AP78358 180 aa7.58□□□□□ -1.2
HMGB1P24-201ENST00000611897 MEIG1Q5JSS6 88 aa7.58□□□□□ -1.2
HMGB1P24-201ENST00000611897 SFTA2Q6UW10 78 aa7.58□□□□□ -1.2
HMGB1P24-201ENST00000611897 FP248Q71RG6 208 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P24-201ENST00000611897 C18orf32Q8TCD1 76 aa7.58□□□□□ -1.2
HMGB1P24-201ENST00000611897 URB1-AS1Q96HZ7 61 aa7.58□□□□□ -1.2
HMGB1P24-201ENST00000611897 RPS10P5Q9NQ39 176 aa7.58□□□□□ -1.2
HMGB1P24-201ENST00000611897 ETDCA0A1B0GVM5 59 aa7.57□□□□□ -1.2
HMGB1P24-201ENST00000611897 LINC00614P0C842 121 aa7.57□□□□□ -1.2
HMGB1P24-201ENST00000611897 SMIM13P0DJ93 91 aa7.57□□□□□ -1.2
HMGB1P24-201ENST00000611897 BOD1L2Q8IYS8 172 aa7.57□□□□□ -1.2
HMGB1P24-201ENST00000611897 CHTOPQ9Y3Y2 248 aaKnown RBP7.57□□□□□ -1.2
HMGB1P24-201ENST00000611897 PRYO14603 147 aa7.56□□□□□ -1.2
HMGB1P24-201ENST00000611897 KRTAP13-3Q3SY46 172 aa7.56□□□□□ -1.2
HMGB1P24-201ENST00000611897 SMCR5Q8TEV8 140 aa7.56□□□□□ -1.2
HMGB1P24-201ENST00000611897 TRAPPC1Q9Y5R8 145 aa7.56□□□□□ -1.2
HMGB1P24-201ENST00000611897 IGLV9-49A0A0B4J1Y8 123 aa7.55□□□□□ -1.2
HMGB1P24-201ENST00000611897 LINC01547P58512 204 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P24-201ENST00000611897 MOBPQ13875 183 aa7.54□□□□□ -1.2
HMGB1P24-201ENST00000611897 GAGE2AQ6NT46 116 aa7.54□□□□□ -1.2
HMGB1P24-201ENST00000611897 MIR7-3HGQ8N6C7 128 aa7.54□□□□□ -1.2
HMGB1P24-201ENST00000611897 TMEM223A0PJW6 202 aa7.53□□□□□ -1.2
HMGB1P24-201ENST00000611897 COMMD7Q86VX2 200 aa7.53□□□□□ -1.2
HMGB1P24-201ENST00000611897 TRBV10-3A0A0K0K1G6 114 aa7.52□□□□□ -1.21
HMGB1P24-201ENST00000611897 RHEBQ15382 184 aa7.52□□□□□ -1.21
HMGB1P24-201ENST00000611897 ASB16-AS1Q495Z4 193 aa7.52□□□□□ -1.21
HMGB1P24-201ENST00000611897 NDUFA12Q9UI09 145 aa7.52□□□□□ -1.21
HMGB1P24-201ENST00000611897 SPINK1P00995 79 aa7.51□□□□□ -1.21
HMGB1P24-201ENST00000611897 S100A12P80511 92 aa7.51□□□□□ -1.21
HMGB1P24-201ENST00000611897 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
HMGB1P24-201ENST00000611897 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
HMGB1P24-201ENST00000611897 H0Y8G0 127 aa7.49□□□□□ -1.21
HMGB1P24-201ENST00000611897 SPRR1AP35321 89 aa7.49□□□□□ -1.21
HMGB1P24-201ENST00000611897 IFITM2Q01629 132 aa7.49□□□□□ -1.21
HMGB1P24-201ENST00000611897 IFI27L1Q96BM0 104 aa7.49□□□□□ -1.21
HMGB1P24-201ENST00000611897 KCNQ1DNQ9H478 68 aa7.49□□□□□ -1.21
HMGB1P24-201ENST00000611897 ERC2-IT1O76042 136 aa7.48□□□□□ -1.21
HMGB1P24-201ENST00000611897 KRTAP4-16G5E9R7 235 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P24-201ENST00000611897 HERV-K104P63124 156 aa7.47□□□□□ -1.21
HMGB1P24-201ENST00000611897 LINC00483Q53H64 154 aa7.47□□□□□ -1.21
HMGB1P24-201ENST00000611897 C9orf153Q5TBE3 101 aa7.47□□□□□ -1.21
HMGB1P24-201ENST00000611897 FAM19A2Q8N3H0 131 aa7.47□□□□□ -1.21
HMGB1P24-201ENST00000611897 MAP1LC3CQ9BXW4 147 aa7.47□□□□□ -1.21
HMGB1P24-201ENST00000611897 FSIP2Q5CZC0 6907 aa7.47□□□□□ -1.21
HMGB1P24-201ENST00000611897 TRAV12-1A0A0B4J245 112 aa7.46□□□□□ -1.22
HMGB1P24-201ENST00000611897 MYMXA0A1B0GTQ4 84 aa7.46□□□□□ -1.22
HMGB1P24-201ENST00000611897 B5MCH6 92 aa7.45□□□□□ -1.22
HMGB1P24-201ENST00000611897 DDTP30046 118 aa7.45□□□□□ -1.22
HMGB1P24-201ENST00000611897 Q8N377 158 aa7.45□□□□□ -1.22
HMGB1P24-201ENST00000611897 LINC00587B1AMM8 73 aa7.44□□□□□ -1.22
HMGB1P24-201ENST00000611897 SLC25A20O43772 301 aa7.44□□□□□ -1.22
HMGB1P24-201ENST00000611897 C10orf91Q5T1B1 145 aa7.44□□□□□ -1.22
HMGB1P24-201ENST00000611897 APOC3P02656 99 aa7.43□□□□□ -1.22
HMGB1P24-201ENST00000611897 TSPEAR-AS2P59090 65 aa7.43□□□□□ -1.22
HMGB1P24-201ENST00000611897 CHCHD1Q96BP2 118 aaKnown RBP7.43□□□□□ -1.22
HMGB1P24-201ENST00000611897 Q9BRP9 147 aa7.43□□□□□ -1.22
HMGB1P24-201ENST00000611897 MIEN1Q9BRT3 115 aa7.43□□□□□ -1.22
HMGB1P24-201ENST00000611897 HSBP1O75506 76 aa7.42□□□□□ -1.22
HMGB1P24-201ENST00000611897 S100A7L2Q5SY68 101 aa7.42□□□□□ -1.22
HMGB1P24-201ENST00000611897 Q6ZRX8 168 aa7.42□□□□□ -1.22
HMGB1P24-201ENST00000611897 SSBP3-AS1Q7Z2R9 100 aa7.42□□□□□ -1.22
HMGB1P24-201ENST00000611897 NPC2P61916 151 aa7.4□□□□□ -1.22
HMGB1P24-201ENST00000611897 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.22
HMGB1P24-201ENST00000611897 XP32Q5T750 250 aa7.4□□□□□ -1.22
HMGB1P24-201ENST00000611897 SPANXB1Q9NS25 103 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P24-201ENST00000611897 LEPROTO15243 131 aa7.39□□□□□ -1.23
HMGB1P24-201ENST00000611897 TRAV23DV6A0A075B6W5 121 aa7.38□□□□□ -1.23
HMGB1P24-201ENST00000611897 TRBV10-2A0A0K0K1G8 114 aa7.38□□□□□ -1.23
HMGB1P24-201ENST00000611897 SNAPINO95295 136 aa7.38□□□□□ -1.23
HMGB1P24-201ENST00000611897 NDUFA5Q16718 116 aa7.38□□□□□ -1.23
HMGB1P24-201ENST00000611897 ST20-AS1Q8NBB2 130 aa7.38□□□□□ -1.23
HMGB1P24-201ENST00000611897 J3QQQ9 107 aa7.37□□□□□ -1.23
HMGB1P24-201ENST00000611897 LGALS3P17931 250 aaKnown RBP7.37□□□□□ -1.23
HMGB1P24-201ENST00000611897 JOSD1Q15040 202 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P24-201ENST00000611897 LCE2DQ5TA82 110 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P24-201ENST00000611897 HRCT1Q6UXD1 115 aa7.37□□□□□ -1.23
HMGB1P24-201ENST00000611897 PMCHL2Q9BQD1 86 aa7.37□□□□□ -1.23
HMGB1P24-201ENST00000611897 HERVK_113P61574 105 aa7.36□□□□□ -1.23
HMGB1P24-201ENST00000611897 SVBPQ8N300 66 aa7.36□□□□□ -1.23
HMGB1P24-201ENST00000611897 C9orf92A6NGG3 77 aa7.35□□□□□ -1.23
HMGB1P24-201ENST00000611897 LEPROTL1O95214 131 aa7.35□□□□□ -1.23
HMGB1P24-201ENST00000611897 ZNF73O43830 326 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P24-201ENST00000611897 IGLV6-57P01721 117 aa7.34□□□□□ -1.23
HMGB1P24-201ENST00000611897 FABP4P15090 132 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms