RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 UBL5Q9BZL1 73 aa10.28□□□□□ -0.76
PCDHGB1-202ENST00000611598 Q6ZQT0 140 aa10.27□□□□□ -0.76
PCDHGB1-202ENST00000611598 VWFP04275 2813 aa10.27□□□□□ -0.77
PCDHGB1-202ENST00000611598 SMIM9A6NGZ8 99 aa10.27□□□□□ -0.77
PCDHGB1-202ENST00000611598 KRTAP1-1Q07627 177 aa10.27□□□□□ -0.77
PCDHGB1-202ENST00000611598 UNC79Q9P2D8 2635 aa10.26□□□□□ -0.77
PCDHGB1-202ENST00000611598 LINC00482Q8N8I6 264 aa10.26□□□□□ -0.77
PCDHGB1-202ENST00000611598 RBM3P98179 157 aaKnown RBP10.25□□□□□ -0.77
PCDHGB1-202ENST00000611598 LAMTOR3Q9UHA4 124 aa10.25□□□□□ -0.77
PCDHGB1-202ENST00000611598 SPAG11BQ08648 103 aa10.24□□□□□ -0.77
PCDHGB1-202ENST00000611598 ZNF561-AS1K7EIQ3 104 aa10.23□□□□□ -0.77
PCDHGB1-202ENST00000611598 C20orf197Q8N268 126 aa10.23□□□□□ -0.77
PCDHGB1-202ENST00000611598 KRTAP10-3P60369 221 aa10.23□□□□□ -0.77
PCDHGB1-202ENST00000611598 TRBV10-3A0A0K0K1G6 114 aa10.22□□□□□ -0.77
PCDHGB1-202ENST00000611598 Q6ZQY7 126 aa10.22□□□□□ -0.77
PCDHGB1-202ENST00000611598 CYSRT1A8MQ03 144 aa10.22□□□□□ -0.77
PCDHGB1-202ENST00000611598 DEFB135Q30KP9 77 aa10.22□□□□□ -0.77
PCDHGB1-202ENST00000611598 LOC110117498A0A087WWA1 95 aa10.21□□□□□ -0.78
PCDHGB1-202ENST00000611598 IGLV6-57P01721 117 aa10.21□□□□□ -0.78
PCDHGB1-202ENST00000611598 LINC01547P58512 204 aaPredicted RBP10.21□□□□□ -0.78
PCDHGB1-202ENST00000611598 HAMPP81172 84 aa10.21□□□□□ -0.78
PCDHGB1-202ENST00000611598 ITPR2Q14571 2701 aa10.2□□□□□ -0.78
PCDHGB1-202ENST00000611598 PDZD2O15018 2839 aa10.2□□□□□ -0.78
PCDHGB1-202ENST00000611598 C5orf47Q569G3 176 aa10.2□□□□□ -0.78
PCDHGB1-202ENST00000611598 LYRM9A8MSI8 78 aa10.2□□□□□ -0.78
PCDHGB1-202ENST00000611598 Q6ZVQ6 151 aa10.2□□□□□ -0.78
PCDHGB1-202ENST00000611598 CELA1Q9UNI1 258 aa10.2□□□□□ -0.78
PCDHGB1-202ENST00000611598 XAGE1AQ9HD64 81 aa10.19□□□□□ -0.78
PCDHGB1-202ENST00000611598 A0A0J9YWU9 116 aa10.18□□□□□ -0.78
PCDHGB1-202ENST00000611598 IGHV4-30-4P0DP06 118 aa10.18□□□□□ -0.78
PCDHGB1-202ENST00000611598 DAD1P61803 113 aa10.18□□□□□ -0.78
PCDHGB1-202ENST00000611598 TRAV10A0A0B4J240 114 aa10.17□□□□□ -0.78
PCDHGB1-202ENST00000611598 HTN3P15516 51 aa10.17□□□□□ -0.78
PCDHGB1-202ENST00000611598 KLK12Q9UKR0 248 aa10.17□□□□□ -0.78
PCDHGB1-202ENST00000611598 HIVEP2P31629 2446 aa10.17□□□□□ -0.78
PCDHGB1-202ENST00000611598 C4orf26Q17RF5 130 aa10.17□□□□□ -0.78
PCDHGB1-202ENST00000611598 Q5XG85 94 aa10.15□□□□□ -0.78
PCDHGB1-202ENST00000611598 FLNBO75369 2602 aaKnown RBP10.15□□□□□ -0.79
PCDHGB1-202ENST00000611598 C6orf48Q9UBA6 75 aa10.15□□□□□ -0.79
PCDHGB1-202ENST00000611598 NDUFC2-KCTD14E9PQ53 114 aa10.14□□□□□ -0.79
PCDHGB1-202ENST00000611598 SCXQ7RTU7 201 aa10.14□□□□□ -0.79
PCDHGB1-202ENST00000611598 MUC7Q8TAX7 377 aa10.14□□□□□ -0.79
PCDHGB1-202ENST00000611598 BAHCC1Q9P281 2608 aa10.14□□□□□ -0.79
PCDHGB1-202ENST00000611598 TRAV7A0A075B6U4 112 aa10.13□□□□□ -0.79
PCDHGB1-202ENST00000611598 C9orf66Q5T8R8 295 aa10.13□□□□□ -0.79
PCDHGB1-202ENST00000611598 DIRC1Q969H9 104 aa10.13□□□□□ -0.79
PCDHGB1-202ENST00000611598 H7BZZ5 65 aa10.13□□□□□ -0.79
PCDHGB1-202ENST00000611598 PRR34Q9NV39 138 aa10.12□□□□□ -0.79
PCDHGB1-202ENST00000611598 FAM236DA0A1B0GTK5 79 aa10.12□□□□□ -0.79
PCDHGB1-202ENST00000611598 FAM236CP0DP71 79 aa10.12□□□□□ -0.79
PCDHGB1-202ENST00000611598 LELP1Q5T871 98 aa10.12□□□□□ -0.79
PCDHGB1-202ENST00000611598 SNURFQ9Y675 71 aa10.12□□□□□ -0.79
PCDHGB1-202ENST00000611598 NOTCH2Q04721 2471 aa10.11□□□□□ -0.79
PCDHGB1-202ENST00000611598 HRCT1Q6UXD1 115 aa10.11□□□□□ -0.79
PCDHGB1-202ENST00000611598 ZNF73O43830 326 aaPredicted RBP10.11□□□□□ -0.79
PCDHGB1-202ENST00000611598 Q8NAQ8 132 aa10.11□□□□□ -0.79
PCDHGB1-202ENST00000611598 SMR3AQ99954 134 aa10.11□□□□□ -0.79
PCDHGB1-202ENST00000611598 GVQW2A0A096LPI5 108 aaPredicted RBP10.09□□□□□ -0.79
PCDHGB1-202ENST00000611598 TRBV7-4A0A0J9YYF1 115 aa10.09□□□□□ -0.79
PCDHGB1-202ENST00000611598 CXCL6P80162 114 aa10.09□□□□□ -0.79
PCDHGB1-202ENST00000611598 RMI2Q96E14 147 aa10.09□□□□□ -0.79
PCDHGB1-202ENST00000611598 PDE6GP18545 87 aa10.08□□□□□ -0.8
PCDHGB1-202ENST00000611598 COX7BP24311 80 aa10.08□□□□□ -0.8
PCDHGB1-202ENST00000611598 HIGD2BQ4VC39 106 aa10.08□□□□□ -0.8
PCDHGB1-202ENST00000611598 BCE1O60756 84 aa10.07□□□□□ -0.8
PCDHGB1-202ENST00000611598 ELOF1P60002 83 aaKnown RBP10.07□□□□□ -0.8
PCDHGB1-202ENST00000611598 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.07□□□□□ -0.8
PCDHGB1-202ENST00000611598 TENM1Q9UKZ4 2725 aa10.07□□□□□ -0.8
PCDHGB1-202ENST00000611598 TM2D3Q9BRN9 247 aa10.07□□□□□ -0.8
PCDHGB1-202ENST00000611598 HIVEP1P15822 2718 aa10.06□□□□□ -0.8
PCDHGB1-202ENST00000611598 KLKP1Q107X0 134 aa10.06□□□□□ -0.8
PCDHGB1-202ENST00000611598 TRRAPQ9Y4A5 3859 aa10.06□□□□□ -0.8
PCDHGB1-202ENST00000611598 VPREB1P12018 145 aa10.05□□□□□ -0.8
PCDHGB1-202ENST00000611598 APOC4P55056 127 aa10.05□□□□□ -0.8
PCDHGB1-202ENST00000611598 SPART-AS1P0CW21 52 aa10.04□□□□□ -0.8
PCDHGB1-202ENST00000611598 H3BQ85 93 aa10.04□□□□□ -0.8
PCDHGB1-202ENST00000611598 F8WEM9 126 aa10.03□□□□□ -0.8
PCDHGB1-202ENST00000611598 MIFP14174 115 aa10.03□□□□□ -0.8
PCDHGB1-202ENST00000611598 Q8N9L7 120 aa10.03□□□□□ -0.8
PCDHGB1-202ENST00000611598 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
PCDHGB1-202ENST00000611598 OTOGQ6ZRI0 2925 aa10.02□□□□□ -0.8
PCDHGB1-202ENST00000611598 EPM2AB3EWF7 344 aa10.02□□□□□ -0.81
PCDHGB1-202ENST00000611598 TRBV7-6A0A0J9YX20 115 aa10.02□□□□□ -0.81
PCDHGB1-202ENST00000611598 WFDC10BQ8IUB3 73 aa10.02□□□□□ -0.81
PCDHGB1-202ENST00000611598 Q6ZRU5 148 aa10.01□□□□□ -0.81
PCDHGB1-202ENST00000611598 SERP1Q9Y6X1 66 aa10.01□□□□□ -0.81
PCDHGB1-202ENST00000611598 LINC00528Q8N1L1 170 aa10□□□□□ -0.81
PCDHGB1-202ENST00000611598 PKD1L1Q8TDX9 2849 aa9.98□□□□□ -0.81
PCDHGB1-202ENST00000611598 M0R378 163 aa9.98□□□□□ -0.81
PCDHGB1-202ENST00000611598 KRTAP26-1Q6PEX3 210 aa9.98□□□□□ -0.81
PCDHGB1-202ENST00000611598 C15orf56Q8N910 161 aa9.97□□□□□ -0.81
PCDHGB1-202ENST00000611598 EGFEM1PQ0D2K5 195 aa9.97□□□□□ -0.81
PCDHGB1-202ENST00000611598 NREPQ16612 68 aa9.97□□□□□ -0.81
PCDHGB1-202ENST00000611598 BPY2O14599 106 aa9.96□□□□□ -0.81
PCDHGB1-202ENST00000611598 WIPF1O43516 503 aa9.96□□□□□ -0.81
PCDHGB1-202ENST00000611598 Q6ZRP5 223 aa9.95□□□□□ -0.82
PCDHGB1-202ENST00000611598 IGKV4-1P06312 121 aa9.94□□□□□ -0.82
PCDHGB1-202ENST00000611598 ATRQ13535 2644 aa9.94□□□□□ -0.82
PCDHGB1-202ENST00000611598 C3orf84H3BNL1 204 aa9.94□□□□□ -0.82
PCDHGB1-202ENST00000611598 FP248Q71RG6 208 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms