RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 C16orf95Q9H693 158 aa10.05□□□□□ -0.8
VPS36-207ENST00000611132 LINC00208Q96KT6 92 aa10.05□□□□□ -0.8
VPS36-207ENST00000611132 CHKB-CPT1BH3BT56 60 aa10.05□□□□□ -0.8
VPS36-207ENST00000611132 Q6ZRU5 148 aa10.04□□□□□ -0.8
VPS36-207ENST00000611132 LAMA1P25391 3075 aa10.04□□□□□ -0.8
VPS36-207ENST00000611132 IGKV4-1P06312 121 aa10.03□□□□□ -0.8
VPS36-207ENST00000611132 IGHV4-30-4P0DP06 118 aa10.03□□□□□ -0.8
VPS36-207ENST00000611132 PSPHP1O15172 72 aa10.03□□□□□ -0.8
VPS36-207ENST00000611132 C6orf48Q9UBA6 75 aa10.03□□□□□ -0.8
VPS36-207ENST00000611132 A6NED7 52 aa10.02□□□□□ -0.8
VPS36-207ENST00000611132 LYPD5Q6UWN5 251 aa10.02□□□□□ -0.8
VPS36-207ENST00000611132 FAM104AQ969W3 186 aa10.02□□□□□ -0.8
VPS36-207ENST00000611132 ELOF1P60002 83 aaKnown RBP10.02□□□□□ -0.81
VPS36-207ENST00000611132 NANOS2P60321 138 aaKnown RBP10.02□□□□□ -0.81
VPS36-207ENST00000611132 DSPP15924 2871 aaKnown RBP10.02□□□□□ -0.81
VPS36-207ENST00000611132 WDFY4Q6ZS81 3184 aa10.01□□□□□ -0.81
VPS36-207ENST00000611132 MGAQ8IWI9 3026 aa10.01□□□□□ -0.81
VPS36-207ENST00000611132 A0A0J9YWU9 116 aa10.01□□□□□ -0.81
VPS36-207ENST00000611132 SMIM29Q86T20 159 aa10□□□□□ -0.81
VPS36-207ENST00000611132 KLKP1Q107X0 134 aa10□□□□□ -0.81
VPS36-207ENST00000611132 IL17DQ8TAD2 202 aa9.99□□□□□ -0.81
VPS36-207ENST00000611132 VCANP13611 3396 aa9.99□□□□□ -0.81
VPS36-207ENST00000611132 PMAIP1Q13794 54 aa9.99□□□□□ -0.81
VPS36-207ENST00000611132 KIAA0087Q14695 138 aa9.98□□□□□ -0.81
VPS36-207ENST00000611132 INAFM1C9JVW0 142 aa9.98□□□□□ -0.81
VPS36-207ENST00000611132 F8WDY8 70 aa9.98□□□□□ -0.81
VPS36-207ENST00000611132 C14orf177Q52M58 125 aa9.98□□□□□ -0.81
VPS36-207ENST00000611132 FSHBP01225 129 aa9.98□□□□□ -0.81
VPS36-207ENST00000611132 IGLV6-57P01721 117 aa9.97□□□□□ -0.81
VPS36-207ENST00000611132 X6R8D5 127 aa9.97□□□□□ -0.81
VPS36-207ENST00000611132 HCG22E2RYF7 251 aa9.96□□□□□ -0.81
VPS36-207ENST00000611132 H7BZZ5 65 aa9.96□□□□□ -0.81
VPS36-207ENST00000611132 EPG5Q9HCE0 2579 aa9.96□□□□□ -0.81
VPS36-207ENST00000611132 OBSCN-AS1Q96MR7 158 aa9.96□□□□□ -0.81
VPS36-207ENST00000611132 Q6ZTC4 211 aa9.95□□□□□ -0.82
VPS36-207ENST00000611132 A0A087WSZ3 146 aa9.94□□□□□ -0.82
VPS36-207ENST00000611132 PRR15LQ9BU68 103 aa9.94□□□□□ -0.82
VPS36-207ENST00000611132 CELSR3Q9NYQ7 3312 aa9.94□□□□□ -0.82
VPS36-207ENST00000611132 REG3GQ6UW15 175 aa9.94□□□□□ -0.82
VPS36-207ENST00000611132 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.94□□□□□ -0.82
VPS36-207ENST00000611132 C7orf33Q8WU49 177 aa9.93□□□□□ -0.82
VPS36-207ENST00000611132 A0A1B0GW54 56 aa9.93□□□□□ -0.82
VPS36-207ENST00000611132 LINC00167Q96N53 147 aa9.93□□□□□ -0.82
VPS36-207ENST00000611132 ERC2-IT1O76042 136 aa9.92□□□□□ -0.82
VPS36-207ENST00000611132 DEFB116Q30KQ4 102 aa9.92□□□□□ -0.82
VPS36-207ENST00000611132 CASC2Q6XLA1 102 aa9.92□□□□□ -0.82
VPS36-207ENST00000611132 RETNQ9HD89 108 aa9.92□□□□□ -0.82
VPS36-207ENST00000611132 GVQW2A0A096LPI5 108 aaPredicted RBP9.92□□□□□ -0.82
VPS36-207ENST00000611132 FRYQ5TBA9 3013 aa9.92□□□□□ -0.82
VPS36-207ENST00000611132 LINC00336Q6ZUF6 198 aa9.91□□□□□ -0.82
VPS36-207ENST00000611132 CSNK1G2-AS1Q8NCQ2 148 aa9.91□□□□□ -0.82
VPS36-207ENST00000611132 PLAC8L1A1L4L8 177 aa9.91□□□□□ -0.82
VPS36-207ENST00000611132 hDV103S1A0JD37 113 aa9.9□□□□□ -0.82
VPS36-207ENST00000611132 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.82
VPS36-207ENST00000611132 H0Y9P7 68 aa9.9□□□□□ -0.82
VPS36-207ENST00000611132 GIG44P09565 113 aaPredicted RBP9.9□□□□□ -0.83
VPS36-207ENST00000611132 OXLD1Q5BKU9 147 aa9.89□□□□□ -0.83
VPS36-207ENST00000611132 Q8NBF4 154 aa9.88□□□□□ -0.83
VPS36-207ENST00000611132 SMR3AQ99954 134 aa9.88□□□□□ -0.83
VPS36-207ENST00000611132 VPREB1P12018 145 aa9.88□□□□□ -0.83
VPS36-207ENST00000611132 F8P00451 2351 aa9.88□□□□□ -0.83
VPS36-207ENST00000611132 TRBV7-4A0A0J9YYF1 115 aa9.87□□□□□ -0.83
VPS36-207ENST00000611132 SZT2Q5T011 3432 aa9.87□□□□□ -0.83
VPS36-207ENST00000611132 Q9BRP9 147 aa9.86□□□□□ -0.83
VPS36-207ENST00000611132 C22orf24Q9Y442 160 aa9.86□□□□□ -0.83
VPS36-207ENST00000611132 SEC61GP60059 68 aa9.85□□□□□ -0.83
VPS36-207ENST00000611132 Q6ZRX8 168 aa9.83□□□□□ -0.84
VPS36-207ENST00000611132 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
VPS36-207ENST00000611132 LIMD2Q9BT23 127 aa9.83□□□□□ -0.84
VPS36-207ENST00000611132 WIPF1O43516 503 aa9.82□□□□□ -0.84
VPS36-207ENST00000611132 M0R2N4 97 aa9.82□□□□□ -0.84
VPS36-207ENST00000611132 LINC01556Q5JQF7 62 aa9.82□□□□□ -0.84
VPS36-207ENST00000611132 PCOTHQ58A44 107 aa9.81□□□□□ -0.84
VPS36-207ENST00000611132 C19orf73Q9NVV2 129 aa9.81□□□□□ -0.84
VPS36-207ENST00000611132 FRYLO94915 3013 aa9.81□□□□□ -0.84
VPS36-207ENST00000611132 A0A096LNT2 108 aa9.81□□□□□ -0.84
VPS36-207ENST00000611132 PRLHP81277 87 aa9.81□□□□□ -0.84
VPS36-207ENST00000611132 CYSTM1Q9H1C7 97 aa9.81□□□□□ -0.84
VPS36-207ENST00000611132 IGLV9-49A0A0B4J1Y8 123 aa9.81□□□□□ -0.84
VPS36-207ENST00000611132 C1orf64Q8NEQ6 169 aa9.81□□□□□ -0.84
VPS36-207ENST00000611132 CENPEQ02224 2701 aa9.8□□□□□ -0.84
VPS36-207ENST00000611132 Q8NAQ8 132 aa9.79□□□□□ -0.84
VPS36-207ENST00000611132 FREM2Q5SZK8 3169 aa9.79□□□□□ -0.84
VPS36-207ENST00000611132 SPINK6Q6UWN8 80 aa9.79□□□□□ -0.84
VPS36-207ENST00000611132 Q6ZRP5 223 aa9.79□□□□□ -0.84
VPS36-207ENST00000611132 LINC00612Q8N6U2 182 aa9.79□□□□□ -0.84
VPS36-207ENST00000611132 SPEGQ15772 3267 aa9.78□□□□□ -0.84
VPS36-207ENST00000611132 ST20-AS1Q8NBB2 130 aa9.78□□□□□ -0.84
VPS36-207ENST00000611132 PRR34Q9NV39 138 aa9.78□□□□□ -0.84
VPS36-207ENST00000611132 H3BNG1 76 aa9.77□□□□□ -0.85
VPS36-207ENST00000611132 LINC00476Q8WZB0 136 aa9.77□□□□□ -0.85
VPS36-207ENST00000611132 ZNF292O60281 2723 aa9.77□□□□□ -0.85
VPS36-207ENST00000611132 ZNF706Q9Y5V0 76 aaPredicted RBP9.76□□□□□ -0.85
VPS36-207ENST00000611132 K7EQZ3 153 aa9.74□□□□□ -0.85
VPS36-207ENST00000611132 KCNQ1DNQ9H478 68 aa9.74□□□□□ -0.85
VPS36-207ENST00000611132 H3BPC8 53 aa9.73□□□□□ -0.85
VPS36-207ENST00000611132 MAP1AP78559 2803 aaPredicted RBP9.72□□□□□ -0.85
VPS36-207ENST00000611132 IGHV6-1A0A0B4J1U7 121 aa9.72□□□□□ -0.85
VPS36-207ENST00000611132 Q5XG85 94 aa9.72□□□□□ -0.85
VPS36-207ENST00000611132 Q8N377 158 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms