RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 PRR3P79522 188 aaKnown RBP13.09□□□□□ -0.31
SEMA3B-210ENST00000611067 A0A1B0GUV1 79 aa13.08□□□□□ -0.32
SEMA3B-210ENST00000611067 NDUFC2-KCTD14E9PQ53 114 aa13.08□□□□□ -0.32
SEMA3B-210ENST00000611067 ENHOQ6UWT2 76 aa13.08□□□□□ -0.32
SEMA3B-210ENST00000611067 FAM19A1Q7Z5A9 133 aa13.08□□□□□ -0.32
SEMA3B-210ENST00000611067 UBL5Q9BZL1 73 aa13.08□□□□□ -0.32
SEMA3B-210ENST00000611067 TRAV23DV6A0A075B6W5 121 aa13.08□□□□□ -0.32
SEMA3B-210ENST00000611067 DEFB135Q30KP9 77 aa13.07□□□□□ -0.32
SEMA3B-210ENST00000611067 IGHV4-30-4P0DP06 118 aa13.06□□□□□ -0.32
SEMA3B-210ENST00000611067 COX17Q14061 63 aa13.06□□□□□ -0.32
SEMA3B-210ENST00000611067 X6R8D5 127 aa13.06□□□□□ -0.32
SEMA3B-210ENST00000611067 COL6A5A8TX70 2615 aa13.04□□□□□ -0.32
SEMA3B-210ENST00000611067 KIAA0087Q14695 138 aa13.02□□□□□ -0.32
SEMA3B-210ENST00000611067 EGFEM1PQ0D2K5 195 aa13.02□□□□□ -0.33
SEMA3B-210ENST00000611067 C6orf99Q4VX62 202 aa13.02□□□□□ -0.33
SEMA3B-210ENST00000611067 CLPSL2Q6UWE3 100 aa13.02□□□□□ -0.33
SEMA3B-210ENST00000611067 GYPEP15421 78 aa13.01□□□□□ -0.33
SEMA3B-210ENST00000611067 KRTAP10-11P60412 298 aa13.01□□□□□ -0.33
SEMA3B-210ENST00000611067 DEFB130BP0DP73 79 aa13□□□□□ -0.33
SEMA3B-210ENST00000611067 DEFB130AP0DP74 79 aa13□□□□□ -0.33
SEMA3B-210ENST00000611067 LINC00575Q6W349 94 aa13□□□□□ -0.33
SEMA3B-210ENST00000611067 Q6ZQT0 140 aa13□□□□□ -0.33
SEMA3B-210ENST00000611067 IGHV4-28A0A0C4DH34 117 aa13□□□□□ -0.33
SEMA3B-210ENST00000611067 BCE1O60756 84 aa13□□□□□ -0.33
SEMA3B-210ENST00000611067 Q5XG85 94 aa13□□□□□ -0.33
SEMA3B-210ENST00000611067 RBM3P98179 157 aaKnown RBP12.99□□□□□ -0.33
SEMA3B-210ENST00000611067 C20orf197Q8N268 126 aa12.99□□□□□ -0.33
SEMA3B-210ENST00000611067 LOC110117498A0A087WWA1 95 aa12.98□□□□□ -0.33
SEMA3B-210ENST00000611067 CD164L2Q6UWJ8 174 aa12.98□□□□□ -0.33
SEMA3B-210ENST00000611067 LINC00612Q8N6U2 182 aa12.97□□□□□ -0.33
SEMA3B-210ENST00000611067 ZNF561-AS1K7EIQ3 104 aa12.97□□□□□ -0.33
SEMA3B-210ENST00000611067 C4orf26Q17RF5 130 aa12.97□□□□□ -0.33
SEMA3B-210ENST00000611067 LYRM9A8MSI8 78 aa12.96□□□□□ -0.33
SEMA3B-210ENST00000611067 MIFP14174 115 aa12.96□□□□□ -0.33
SEMA3B-210ENST00000611067 NBEAL2Q6ZNJ1 2754 aa12.96□□□□□ -0.33
SEMA3B-210ENST00000611067 C6orf223Q8N319 242 aa12.96□□□□□ -0.34
SEMA3B-210ENST00000611067 Q8NDZ9 215 aa12.96□□□□□ -0.34
SEMA3B-210ENST00000611067 C9orf116Q5BN46 136 aaPredicted RBP12.95□□□□□ -0.34
SEMA3B-210ENST00000611067 TRAV7A0A075B6U4 112 aa12.95□□□□□ -0.34
SEMA3B-210ENST00000611067 DEFB4AO15263 64 aa12.94□□□□□ -0.34
SEMA3B-210ENST00000611067 FAM236DA0A1B0GTK5 79 aa12.93□□□□□ -0.34
SEMA3B-210ENST00000611067 FAM236CP0DP71 79 aa12.93□□□□□ -0.34
SEMA3B-210ENST00000611067 LINC00269Q8N2A0 174 aa12.93□□□□□ -0.34
SEMA3B-210ENST00000611067 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
SEMA3B-210ENST00000611067 PKD1L1Q8TDX9 2849 aa12.93□□□□□ -0.34
SEMA3B-210ENST00000611067 Q8NAQ8 132 aa12.93□□□□□ -0.34
SEMA3B-210ENST00000611067 LAMTOR3Q9UHA4 124 aa12.93□□□□□ -0.34
SEMA3B-210ENST00000611067 PRO0255Q9UI72 69 aa12.93□□□□□ -0.34
SEMA3B-210ENST00000611067 LINC01547P58512 204 aaPredicted RBP12.92□□□□□ -0.34
SEMA3B-210ENST00000611067 A0A096LPF7 62 aa12.91□□□□□ -0.34
SEMA3B-210ENST00000611067 H7BZZ5 65 aa12.91□□□□□ -0.34
SEMA3B-210ENST00000611067 HRCT1Q6UXD1 115 aa12.91□□□□□ -0.34
SEMA3B-210ENST00000611067 M0R2N4 97 aa12.9□□□□□ -0.34
SEMA3B-210ENST00000611067 Q6ZVQ6 151 aa12.9□□□□□ -0.34
SEMA3B-210ENST00000611067 DAD1P61803 113 aa12.9□□□□□ -0.35
SEMA3B-210ENST00000611067 MUC7Q8TAX7 377 aa12.9□□□□□ -0.35
SEMA3B-210ENST00000611067 EPM2AB3EWF7 344 aa12.89□□□□□ -0.35
SEMA3B-210ENST00000611067 IGLV10-54A0A075B6I4 117 aa12.88□□□□□ -0.35
SEMA3B-210ENST00000611067 PDE6GP18545 87 aa12.88□□□□□ -0.35
SEMA3B-210ENST00000611067 CMYA5Q8N3K9 4069 aa12.88□□□□□ -0.35
SEMA3B-210ENST00000611067 H3BQ85 93 aa12.88□□□□□ -0.35
SEMA3B-210ENST00000611067 HAMPP81172 84 aa12.88□□□□□ -0.35
SEMA3B-210ENST00000611067 REG3AQ06141 175 aa12.88□□□□□ -0.35
SEMA3B-210ENST00000611067 KLKP1Q107X0 134 aa12.88□□□□□ -0.35
SEMA3B-210ENST00000611067 SPART-AS1P0CW21 52 aa12.87□□□□□ -0.35
SEMA3B-210ENST00000611067 IGLV6-57P01721 117 aa12.87□□□□□ -0.35
SEMA3B-210ENST00000611067 ANGP03950 147 aaKnown RBP12.87□□□□□ -0.35
SEMA3B-210ENST00000611067 CXCL6P80162 114 aa12.87□□□□□ -0.35
SEMA3B-210ENST00000611067 SERP1Q9Y6X1 66 aa12.87□□□□□ -0.35
SEMA3B-210ENST00000611067 CELA1Q9UNI1 258 aa12.86□□□□□ -0.35
SEMA3B-210ENST00000611067 Q6ZQY7 126 aa12.85□□□□□ -0.35
SEMA3B-210ENST00000611067 TRAV10A0A0B4J240 114 aa12.85□□□□□ -0.35
SEMA3B-210ENST00000611067 C10orf25Q5T742 122 aa12.83□□□□□ -0.35
SEMA3B-210ENST00000611067 UNQ6190/PRO20217Q6UXQ8 127 aa12.83□□□□□ -0.35
SEMA3B-210ENST00000611067 Q8N3U1 123 aa12.83□□□□□ -0.35
SEMA3B-210ENST00000611067 RETNQ9HD89 108 aa12.83□□□□□ -0.35
SEMA3B-210ENST00000611067 A0A0J9YWU9 116 aa12.82□□□□□ -0.36
SEMA3B-210ENST00000611067 MDFIQ99750 246 aa12.82□□□□□ -0.36
SEMA3B-210ENST00000611067 SPAG11BQ08648 103 aa12.82□□□□□ -0.36
SEMA3B-210ENST00000611067 ANK2Q01484 3957 aa12.82□□□□□ -0.36
SEMA3B-210ENST00000611067 NOTCH1P46531 2555 aa12.81□□□□□ -0.36
SEMA3B-210ENST00000611067 HTN3P15516 51 aa12.78□□□□□ -0.36
SEMA3B-210ENST00000611067 SNURFQ9Y675 71 aa12.78□□□□□ -0.36
SEMA3B-210ENST00000611067 TRBV7-4A0A0J9YYF1 115 aa12.78□□□□□ -0.36
SEMA3B-210ENST00000611067 PRB2P02812 416 aaPredicted RBP12.78□□□□□ -0.36
SEMA3B-210ENST00000611067 RMI2Q96E14 147 aa12.78□□□□□ -0.36
SEMA3B-210ENST00000611067 DIRC1Q969H9 104 aa12.77□□□□□ -0.36
SEMA3B-210ENST00000611067 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.77□□□□□ -0.37
SEMA3B-210ENST00000611067 DNAH3Q8TD57 4116 aa12.75□□□□□ -0.37
SEMA3B-210ENST00000611067 F8WEM9 126 aa12.75□□□□□ -0.37
SEMA3B-210ENST00000611067 GVQW2A0A096LPI5 108 aaPredicted RBP12.74□□□□□ -0.37
SEMA3B-210ENST00000611067 NDUFC1O43677 76 aa12.74□□□□□ -0.37
SEMA3B-210ENST00000611067 NBEAL1Q6ZS30 2694 aa12.73□□□□□ -0.37
SEMA3B-210ENST00000611067 MGAM2Q2M2H8 2515 aa12.72□□□□□ -0.37
SEMA3B-210ENST00000611067 K7EIL1 84 aa12.72□□□□□ -0.37
SEMA3B-210ENST00000611067 MRAPQ8TCY5 172 aa12.72□□□□□ -0.37
SEMA3B-210ENST00000611067 TM2D3Q9BRN9 247 aa12.72□□□□□ -0.37
SEMA3B-210ENST00000611067 ZNF73O43830 326 aaPredicted RBP12.72□□□□□ -0.37
SEMA3B-210ENST00000611067 KPRPQ5T749 579 aaPredicted RBP12.72□□□□□ -0.37
SEMA3B-210ENST00000611067 COX7BP24311 80 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms