RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 LINC00304Q8N9R0 145 aa9.3□□□□□ -0.92
SGMS1-209ENST00000609445 CHTOPQ9Y3Y2 248 aaKnown RBP9.29□□□□□ -0.92
SGMS1-209ENST00000609445 IGKV2D-26A0A0A0MRZ7 120 aa9.28□□□□□ -0.92
SGMS1-209ENST00000609445 A0A0U1RRA0 63 aa9.28□□□□□ -0.92
SGMS1-209ENST00000609445 APOC3P02656 99 aa9.27□□□□□ -0.93
SGMS1-209ENST00000609445 LINC00158P58513 81 aa9.27□□□□□ -0.93
SGMS1-209ENST00000609445 C3orf22Q8N5N4 141 aa9.27□□□□□ -0.93
SGMS1-209ENST00000609445 PLEKHB2Q96CS7 222 aa9.27□□□□□ -0.93
SGMS1-209ENST00000609445 CBLN2Q8IUK8 224 aa9.26□□□□□ -0.93
SGMS1-209ENST00000609445 TMEM223A0PJW6 202 aa9.25□□□□□ -0.93
SGMS1-209ENST00000609445 SFTA2Q6UW10 78 aa9.25□□□□□ -0.93
SGMS1-209ENST00000609445 HIGD2AQ9BW72 106 aa9.25□□□□□ -0.93
SGMS1-209ENST00000609445 SMIM13P0DJ93 91 aa9.23□□□□□ -0.93
SGMS1-209ENST00000609445 IFI27L1Q96BM0 104 aa9.23□□□□□ -0.93
SGMS1-209ENST00000609445 YPEL4Q96NS1 127 aa9.23□□□□□ -0.93
SGMS1-209ENST00000609445 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
SGMS1-209ENST00000609445 SNAPINO95295 136 aa9.22□□□□□ -0.93
SGMS1-209ENST00000609445 SVBPQ8N300 66 aa9.21□□□□□ -0.94
SGMS1-209ENST00000609445 KRTAP3-3Q9BYR6 98 aa9.21□□□□□ -0.94
SGMS1-209ENST00000609445 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.94
SGMS1-209ENST00000609445 MUC17Q685J3 4493 aa9.21□□□□□ -0.94
SGMS1-209ENST00000609445 IGLV7-46A0A075B6I9 117 aa9.2□□□□□ -0.94
SGMS1-209ENST00000609445 BOD1L2Q8IYS8 172 aa9.2□□□□□ -0.94
SGMS1-209ENST00000609445 CHCHD1Q96BP2 118 aaKnown RBP9.2□□□□□ -0.94
SGMS1-209ENST00000609445 SPRR4Q96PI1 79 aa9.2□□□□□ -0.94
SGMS1-209ENST00000609445 A0A0U1RQV1 116 aa9.19□□□□□ -0.94
SGMS1-209ENST00000609445 NCR3O14931 201 aa9.19□□□□□ -0.94
SGMS1-209ENST00000609445 ATP6V1G1O75348 118 aa9.19□□□□□ -0.94
SGMS1-209ENST00000609445 NDUFA5Q16718 116 aa9.19□□□□□ -0.94
SGMS1-209ENST00000609445 MEIG1Q5JSS6 88 aa9.19□□□□□ -0.94
SGMS1-209ENST00000609445 MIR7-3HGQ8N6C7 128 aa9.19□□□□□ -0.94
SGMS1-209ENST00000609445 FAT4Q6V0I7 4981 aa9.18□□□□□ -0.94
SGMS1-209ENST00000609445 FAM19A2Q8N3H0 131 aa9.18□□□□□ -0.94
SGMS1-209ENST00000609445 PRYO14603 147 aa9.17□□□□□ -0.94
SGMS1-209ENST00000609445 TPRXLQ17RH7 258 aa9.17□□□□□ -0.94
SGMS1-209ENST00000609445 CDIP1Q9H305 208 aa9.17□□□□□ -0.94
SGMS1-209ENST00000609445 H0Y8G0 127 aa9.16□□□□□ -0.94
SGMS1-209ENST00000609445 HERV-K104P63124 156 aa9.15□□□□□ -0.94
SGMS1-209ENST00000609445 CTAG1AP78358 180 aa9.15□□□□□ -0.94
SGMS1-209ENST00000609445 PPDPFQ9H3Y8 114 aa9.15□□□□□ -0.94
SGMS1-209ENST00000609445 NDUFA12Q9UI09 145 aa9.15□□□□□ -0.94
SGMS1-209ENST00000609445 TRBV10-3A0A0K0K1G6 114 aa9.14□□□□□ -0.95
SGMS1-209ENST00000609445 KRTAP4-16G5E9R7 235 aaPredicted RBP9.14□□□□□ -0.95
SGMS1-209ENST00000609445 HSBP1O75506 76 aa9.14□□□□□ -0.95
SGMS1-209ENST00000609445 SPRR1AP35321 89 aa9.14□□□□□ -0.95
SGMS1-209ENST00000609445 TSPEAR-AS2P59090 65 aa9.14□□□□□ -0.95
SGMS1-209ENST00000609445 LINC00337Q8N6G1 96 aa9.14□□□□□ -0.95
SGMS1-209ENST00000609445 DAND5Q8N907 189 aa9.14□□□□□ -0.95
SGMS1-209ENST00000609445 SMCR5Q8TEV8 140 aa9.14□□□□□ -0.95
SGMS1-209ENST00000609445 KCNQ1DNQ9H478 68 aa9.14□□□□□ -0.95
SGMS1-209ENST00000609445 ZNF706Q9Y5V0 76 aaPredicted RBP9.14□□□□□ -0.95
SGMS1-209ENST00000609445 MYMXA0A1B0GTQ4 84 aa9.12□□□□□ -0.95
SGMS1-209ENST00000609445 ETDCA0A1B0GVM5 59 aa9.12□□□□□ -0.95
SGMS1-209ENST00000609445 SPAG11AQ6PDA7 123 aa9.12□□□□□ -0.95
SGMS1-209ENST00000609445 Q8NBF4 154 aa9.12□□□□□ -0.95
SGMS1-209ENST00000609445 LCE2AQ5TA79 106 aaPredicted RBP9.11□□□□□ -0.95
SGMS1-209ENST00000609445 LINC00310P59036 64 aa9.1□□□□□ -0.95
SGMS1-209ENST00000609445 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
SGMS1-209ENST00000609445 LINC00587B1AMM8 73 aa9.09□□□□□ -0.95
SGMS1-209ENST00000609445 LEPROTO15243 131 aa9.09□□□□□ -0.95
SGMS1-209ENST00000609445 TRGC2P03986 189 aa9.09□□□□□ -0.95
SGMS1-209ENST00000609445 MAP1LC3CQ9BXW4 147 aa9.09□□□□□ -0.95
SGMS1-209ENST00000609445 SERF1AO75920 110 aa9.08□□□□□ -0.96
SGMS1-209ENST00000609445 LEPROTL1O95214 131 aa9.08□□□□□ -0.96
SGMS1-209ENST00000609445 B5MCH6 92 aa9.07□□□□□ -0.96
SGMS1-209ENST00000609445 ERC2-IT1O76042 136 aa9.07□□□□□ -0.96
SGMS1-209ENST00000609445 GAGE2AQ6NT46 116 aa9.07□□□□□ -0.96
SGMS1-209ENST00000609445 PMCHL2Q9BQD1 86 aa9.07□□□□□ -0.96
SGMS1-209ENST00000609445 DDTP30046 118 aa9.06□□□□□ -0.96
SGMS1-209ENST00000609445 LINC00483Q53H64 154 aa9.06□□□□□ -0.96
SGMS1-209ENST00000609445 LOC107984156A0A0G2JMH3 177 aa9.05□□□□□ -0.96
SGMS1-209ENST00000609445 J3QQQ9 107 aa9.05□□□□□ -0.96
SGMS1-209ENST00000609445 FABP4P15090 132 aa9.05□□□□□ -0.96
SGMS1-209ENST00000609445 FP248Q71RG6 208 aaPredicted RBP9.05□□□□□ -0.96
SGMS1-209ENST00000609445 ARL17AQ8IVW1 177 aa9.05□□□□□ -0.96
SGMS1-209ENST00000609445 IGLV9-49A0A0B4J1Y8 123 aa9.04□□□□□ -0.96
SGMS1-209ENST00000609445 PLNP26678 52 aa9.04□□□□□ -0.96
SGMS1-209ENST00000609445 Q9BRP9 147 aa9.04□□□□□ -0.96
SGMS1-209ENST00000609445 KRTAP9-2Q9BYQ4 174 aa9.04□□□□□ -0.96
SGMS1-209ENST00000609445 TRBV10-2A0A0K0K1G8 114 aa9.03□□□□□ -0.96
SGMS1-209ENST00000609445 DPM2O94777 84 aa9.03□□□□□ -0.96
SGMS1-209ENST00000609445 S100A12P80511 92 aa9.03□□□□□ -0.96
SGMS1-209ENST00000609445 MOBPQ13875 183 aa9.03□□□□□ -0.96
SGMS1-209ENST00000609445 KRTAP13-3Q3SY46 172 aa9.03□□□□□ -0.96
SGMS1-209ENST00000609445 SPINK1P00995 79 aa9.02□□□□□ -0.97
SGMS1-209ENST00000609445 LGALS3P17931 250 aaKnown RBP9.01□□□□□ -0.97
SGMS1-209ENST00000609445 HERVK_113P61574 105 aa9.01□□□□□ -0.97
SGMS1-209ENST00000609445 SPANXB1Q9NS25 103 aaPredicted RBP9.01□□□□□ -0.97
SGMS1-209ENST00000609445 HSPB8Q9UJY1 196 aa9.01□□□□□ -0.97
SGMS1-209ENST00000609445 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
SGMS1-209ENST00000609445 IGLV6-57P01721 117 aa9□□□□□ -0.97
SGMS1-209ENST00000609445 IGKCP01834 107 aa9□□□□□ -0.97
SGMS1-209ENST00000609445 NMUP48645 174 aa9□□□□□ -0.97
SGMS1-209ENST00000609445 NPC2P61916 151 aa9□□□□□ -0.97
SGMS1-209ENST00000609445 SOSTDC1Q6X4U4 206 aa9□□□□□ -0.97
SGMS1-209ENST00000609445 Q6ZRX8 168 aa9□□□□□ -0.97
SGMS1-209ENST00000609445 MIEN1Q9BRT3 115 aa9□□□□□ -0.97
SGMS1-209ENST00000609445 S100A7L2Q5SY68 101 aa8.99□□□□□ -0.97
SGMS1-209ENST00000609445 NDUFC2O95298 119 aa8.98□□□□□ -0.97
SGMS1-209ENST00000609445 ADAMTSL4-AS1Q5T5F5 129 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms