RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 J3QKU1 62 aa15.14■□□□□ 0.01
SHANK2-220ENST00000608988 UNQ6190/PRO20217Q6UXQ8 127 aa15.14■□□□□ 0.01
SHANK2-220ENST00000608988 CSMD2Q7Z408 3487 aa15.13■□□□□ 0.01
SHANK2-220ENST00000608988 POLQO75417 2590 aa15.13■□□□□ 0.01
SHANK2-220ENST00000608988 KLKP1Q107X0 134 aa15.13■□□□□ 0.01
SHANK2-220ENST00000608988 DIRC1Q969H9 104 aa15.13■□□□□ 0.01
SHANK2-220ENST00000608988 EPM2AB3EWF7 344 aa15.12■□□□□ 0.01
SHANK2-220ENST00000608988 Q6ZQY7 126 aa15.12■□□□□ 0.01
SHANK2-220ENST00000608988 SETXQ7Z333 2677 aaKnown RBP15.12■□□□□ 0.01
SHANK2-220ENST00000608988 C10orf25Q5T742 122 aa15.12■□□□□ 0.01
SHANK2-220ENST00000608988 SERP1Q9Y6X1 66 aa15.12■□□□□ 0.01
SHANK2-220ENST00000608988 NAV2Q8IVL1 2488 aa15.12■□□□□ 0.01
SHANK2-220ENST00000608988 AKAP9Q99996 3911 aa15.11■□□□□ 0.01
SHANK2-220ENST00000608988 GCN1Q92616 2671 aaKnown RBP15.11■□□□□ 0.01
SHANK2-220ENST00000608988 CYSRT1A8MQ03 144 aa15.11■□□□□ 0.01
SHANK2-220ENST00000608988 LELP1Q5T871 98 aa15.11■□□□□ 0.01
SHANK2-220ENST00000608988 HAMPP81172 84 aa15.1■□□□□ 0.01
SHANK2-220ENST00000608988 Q5XG85 94 aa15.1■□□□□ 0.01
SHANK2-220ENST00000608988 APCP25054 2843 aa15.1■□□□□ 0.01
SHANK2-220ENST00000608988 PRR34Q9NV39 138 aa15.1■□□□□ 0.01
SHANK2-220ENST00000608988 ABCA12Q86UK0 2595 aa15.09■□□□□ 0.01
SHANK2-220ENST00000608988 TRBV7-4A0A0J9YYF1 115 aa15.09■□□□□ 0.01
SHANK2-220ENST00000608988 H7BZZ5 65 aa15.09■□□□□ 0.01
SHANK2-220ENST00000608988 DAD1P61803 113 aa15.08■□□□□ 0.01
SHANK2-220ENST00000608988 KRTAP1-1Q07627 177 aa15.08■□□□□ 0.01
SHANK2-220ENST00000608988 TLN2Q9Y4G6 2542 aa15.07■□□□□ 0
SHANK2-220ENST00000608988 COX7BP24311 80 aa15.06■□□□□ 0
SHANK2-220ENST00000608988 Q8N3U1 123 aa15.06■□□□□ 0
SHANK2-220ENST00000608988 SPATA3Q8NHX4 192 aa15.06■□□□□ 0
SHANK2-220ENST00000608988 FASNP49327 2511 aaKnown RBP15.06■□□□□ 0
SHANK2-220ENST00000608988 M0R2N4 97 aa15.06■□□□□ 0
SHANK2-220ENST00000608988 NDUFC1O43677 76 aa15.06■□□□□ 0
SHANK2-220ENST00000608988 APOC4P55056 127 aa15.04■□□□□ -0
SHANK2-220ENST00000608988 ZNF73O43830 326 aaPredicted RBP15.03■□□□□ -0
SHANK2-220ENST00000608988 ELOF1P60002 83 aaKnown RBP15.03■□□□□ -0
SHANK2-220ENST00000608988 TRAV10A0A0B4J240 114 aa15.01□□□□□ -0.01
SHANK2-220ENST00000608988 ATP5EP56381 51 aaPredicted RBP15.01□□□□□ -0.01
SHANK2-220ENST00000608988 C4orf26Q17RF5 130 aa15.01□□□□□ -0.01
SHANK2-220ENST00000608988 C6orf48Q9UBA6 75 aa15.01□□□□□ -0.01
SHANK2-220ENST00000608988 JMJD1CQ15652 2540 aa15.01□□□□□ -0.01
SHANK2-220ENST00000608988 MIFP14174 115 aa15□□□□□ -0.01
SHANK2-220ENST00000608988 UNC79Q9P2D8 2635 aa14.98□□□□□ -0.01
SHANK2-220ENST00000608988 ERC2-IT1O76042 136 aa14.97□□□□□ -0.01
SHANK2-220ENST00000608988 KLK12Q9UKR0 248 aa14.97□□□□□ -0.01
SHANK2-220ENST00000608988 SPART-AS1P0CW21 52 aa14.97□□□□□ -0.01
SHANK2-220ENST00000608988 DEFB135Q30KP9 77 aa14.97□□□□□ -0.01
SHANK2-220ENST00000608988 ITPR2Q14571 2701 aa14.96□□□□□ -0.01
SHANK2-220ENST00000608988 M0R378 163 aa14.95□□□□□ -0.02
SHANK2-220ENST00000608988 Q8NAQ8 132 aa14.95□□□□□ -0.02
SHANK2-220ENST00000608988 PDZD2O15018 2839 aa14.95□□□□□ -0.02
SHANK2-220ENST00000608988 HRCT1Q6UXD1 115 aa14.95□□□□□ -0.02
SHANK2-220ENST00000608988 VPREB1P12018 145 aa14.94□□□□□ -0.02
SHANK2-220ENST00000608988 KRTAP10-3P60369 221 aa14.94□□□□□ -0.02
SHANK2-220ENST00000608988 EGFEM1PQ0D2K5 195 aa14.94□□□□□ -0.02
SHANK2-220ENST00000608988 ITPR3Q14573 2671 aa14.93□□□□□ -0.02
SHANK2-220ENST00000608988 DEFB4AO15263 64 aa14.92□□□□□ -0.02
SHANK2-220ENST00000608988 XAGE1AQ9HD64 81 aa14.91□□□□□ -0.02
SHANK2-220ENST00000608988 CELA1Q9UNI1 258 aa14.91□□□□□ -0.02
SHANK2-220ENST00000608988 SMIM26A0A096LP01 95 aa14.9□□□□□ -0.02
SHANK2-220ENST00000608988 F8WEM9 126 aa14.9□□□□□ -0.02
SHANK2-220ENST00000608988 LINC00528Q8N1L1 170 aa14.9□□□□□ -0.02
SHANK2-220ENST00000608988 RMI2Q96E14 147 aa14.9□□□□□ -0.02
SHANK2-220ENST00000608988 SNURFQ9Y675 71 aa14.89□□□□□ -0.03
SHANK2-220ENST00000608988 HECTD1Q9ULT8 2610 aa14.88□□□□□ -0.03
SHANK2-220ENST00000608988 F8WDY8 70 aa14.88□□□□□ -0.03
SHANK2-220ENST00000608988 NREPQ16612 68 aa14.88□□□□□ -0.03
SHANK2-220ENST00000608988 MRAPQ8TCY5 172 aa14.88□□□□□ -0.03
SHANK2-220ENST00000608988 ZNF469Q96JG9 3925 aaPredicted RBP14.87□□□□□ -0.03
SHANK2-220ENST00000608988 CAMK2N2Q96S95 79 aa14.87□□□□□ -0.03
SHANK2-220ENST00000608988 TM2D3Q9BRN9 247 aa14.86□□□□□ -0.03
SHANK2-220ENST00000608988 BPY2O14599 106 aa14.86□□□□□ -0.03
SHANK2-220ENST00000608988 SONP18583 2426 aaKnown RBP14.85□□□□□ -0.03
SHANK2-220ENST00000608988 HTN3P15516 51 aa14.84□□□□□ -0.03
SHANK2-220ENST00000608988 SCXQ7RTU7 201 aa14.82□□□□□ -0.04
SHANK2-220ENST00000608988 A0A1B0GW54 56 aa14.82□□□□□ -0.04
SHANK2-220ENST00000608988 H3BNG1 76 aa14.82□□□□□ -0.04
SHANK2-220ENST00000608988 CCDC168Q8NDH2 2452 aa14.81□□□□□ -0.04
SHANK2-220ENST00000608988 TMEM254Q8TBM7 123 aa14.81□□□□□ -0.04
SHANK2-220ENST00000608988 KRTAP26-1Q6PEX3 210 aa14.8□□□□□ -0.04
SHANK2-220ENST00000608988 IGKV4-1P06312 121 aa14.8□□□□□ -0.04
SHANK2-220ENST00000608988 NF1P21359 2839 aa14.79□□□□□ -0.04
SHANK2-220ENST00000608988 NIPBLQ6KC79 2804 aaeCLIP14.77□□□□□ -0.04
SHANK2-220ENST00000608988 Q6ZRU5 148 aa14.77□□□□□ -0.05
SHANK2-220ENST00000608988 FLNAP21333 2647 aaKnown RBP14.76□□□□□ -0.05
SHANK2-220ENST00000608988 HIGD2BQ4VC39 106 aa14.76□□□□□ -0.05
SHANK2-220ENST00000608988 OCR1Q9BZK8 76 aa14.75□□□□□ -0.05
SHANK2-220ENST00000608988 FN1P02751 2386 aaKnown RBP14.74□□□□□ -0.05
SHANK2-220ENST00000608988 C15orf56Q8N910 161 aa14.74□□□□□ -0.05
SHANK2-220ENST00000608988 PRO0628Q9UI54 55 aa14.74□□□□□ -0.05
SHANK2-220ENST00000608988 A0A0U1RQV1 116 aa14.73□□□□□ -0.05
SHANK2-220ENST00000608988 FP248Q71RG6 208 aaPredicted RBP14.73□□□□□ -0.05
SHANK2-220ENST00000608988 KCNQ1DNQ9H478 68 aa14.73□□□□□ -0.05
SHANK2-220ENST00000608988 IGLV5-48A0A075B6I7 105 aa14.72□□□□□ -0.05
SHANK2-220ENST00000608988 PRYO14603 147 aa14.7□□□□□ -0.06
SHANK2-220ENST00000608988 WFDC10BQ8IUB3 73 aa14.69□□□□□ -0.06
SHANK2-220ENST00000608988 DHRS4-AS1Q9P1J3 65 aa14.67□□□□□ -0.06
SHANK2-220ENST00000608988 SETD2Q9BYW2 2564 aaPredicted RBP14.66□□□□□ -0.06
SHANK2-220ENST00000608988 KPRPQ5T749 579 aaPredicted RBP14.66□□□□□ -0.06
SHANK2-220ENST00000608988 Q6ZRP5 223 aa14.66□□□□□ -0.06
SHANK2-220ENST00000608988 NKAPP1Q8N9T2 125 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms