RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 VPREB1P12018 145 aa11.49□□□□□ -0.57
CTSA-217ENST00000607482 HSPB8Q9UJY1 196 aa11.49□□□□□ -0.57
CTSA-217ENST00000607482 SERF1AO75920 110 aa11.48□□□□□ -0.57
CTSA-217ENST00000607482 FAM19A1Q7Z5A9 133 aa11.48□□□□□ -0.57
CTSA-217ENST00000607482 LINC00587B1AMM8 73 aa11.47□□□□□ -0.57
CTSA-217ENST00000607482 CRYGAP11844 174 aa11.47□□□□□ -0.57
CTSA-217ENST00000607482 HERV-K104P63124 156 aa11.47□□□□□ -0.57
CTSA-217ENST00000607482 SMIM13P0DJ93 91 aa11.46□□□□□ -0.57
CTSA-217ENST00000607482 FABP4P15090 132 aa11.46□□□□□ -0.57
CTSA-217ENST00000607482 MAP1LC3CQ9BXW4 147 aa11.46□□□□□ -0.57
CTSA-217ENST00000607482 MYMXA0A1B0GTQ4 84 aa11.45□□□□□ -0.58
CTSA-217ENST00000607482 TMEM238C9JI98 176 aa11.45□□□□□ -0.58
CTSA-217ENST00000607482 PLNP26678 52 aa11.45□□□□□ -0.58
CTSA-217ENST00000607482 TYMSOSQ8TAI1 123 aa11.45□□□□□ -0.58
CTSA-217ENST00000607482 TMEM126AQ9H061 195 aa11.45□□□□□ -0.58
CTSA-217ENST00000607482 NDUFA12Q9UI09 145 aa11.45□□□□□ -0.58
CTSA-217ENST00000607482 PRLHP81277 87 aa11.44□□□□□ -0.58
CTSA-217ENST00000607482 HERVK_113P61574 105 aa11.43□□□□□ -0.58
CTSA-217ENST00000607482 BOD1L2Q8IYS8 172 aa11.43□□□□□ -0.58
CTSA-217ENST00000607482 M0R378 163 aa11.42□□□□□ -0.58
CTSA-217ENST00000607482 DPM2O94777 84 aa11.41□□□□□ -0.58
CTSA-217ENST00000607482 TSPAN13O95857 204 aa11.41□□□□□ -0.58
CTSA-217ENST00000607482 PRR4Q16378 134 aa11.41□□□□□ -0.58
CTSA-217ENST00000607482 MIR7-3HGQ8N6C7 128 aa11.41□□□□□ -0.58
CTSA-217ENST00000607482 PLEKHB2Q96CS7 222 aa11.41□□□□□ -0.58
CTSA-217ENST00000607482 LRP2P98164 4655 aa11.4□□□□□ -0.58
CTSA-217ENST00000607482 S100A12P80511 92 aa11.4□□□□□ -0.58
CTSA-217ENST00000607482 ANAPC11Q9NYG5 84 aa11.4□□□□□ -0.58
CTSA-217ENST00000607482 A0A087X002 238 aa11.39□□□□□ -0.59
CTSA-217ENST00000607482 COLCA2A8K830 154 aa11.39□□□□□ -0.59
CTSA-217ENST00000607482 IGKV2D-26A0A0A0MRZ7 120 aa11.38□□□□□ -0.59
CTSA-217ENST00000607482 NCR3O14931 201 aa11.38□□□□□ -0.59
CTSA-217ENST00000607482 LEPROTO15243 131 aa11.38□□□□□ -0.59
CTSA-217ENST00000607482 LGALS3P17931 250 aaKnown RBP11.38□□□□□ -0.59
CTSA-217ENST00000607482 KRTAP13-1Q8IUC0 172 aa11.38□□□□□ -0.59
CTSA-217ENST00000607482 Q8NDZ9 215 aa11.38□□□□□ -0.59
CTSA-217ENST00000607482 PMCHL2Q9BQD1 86 aa11.38□□□□□ -0.59
CTSA-217ENST00000607482 HIGD2AQ9BW72 106 aa11.38□□□□□ -0.59
CTSA-217ENST00000607482 IGKCP01834 107 aa11.37□□□□□ -0.59
CTSA-217ENST00000607482 LINC00310P59036 64 aa11.36□□□□□ -0.59
CTSA-217ENST00000607482 FAM229BQ4G0N7 80 aa11.36□□□□□ -0.59
CTSA-217ENST00000607482 MIEN1Q9BRT3 115 aa11.36□□□□□ -0.59
CTSA-217ENST00000607482 J3QQQ9 107 aa11.35□□□□□ -0.59
CTSA-217ENST00000607482 NMUP48645 174 aa11.33□□□□□ -0.6
CTSA-217ENST00000607482 ETDCA0A1B0GVM5 59 aa11.32□□□□□ -0.6
CTSA-217ENST00000607482 PRYO14603 147 aa11.32□□□□□ -0.6
CTSA-217ENST00000607482 DAND5Q8N907 189 aa11.32□□□□□ -0.6
CTSA-217ENST00000607482 TSPEAR-AS2P59090 65 aa11.31□□□□□ -0.6
CTSA-217ENST00000607482 ZNF706Q9Y5V0 76 aaPredicted RBP11.31□□□□□ -0.6
CTSA-217ENST00000607482 LINC00304Q8N9R0 145 aa11.29□□□□□ -0.6
CTSA-217ENST00000607482 TRBV10-3A0A0K0K1G6 114 aa11.27□□□□□ -0.61
CTSA-217ENST00000607482 KRTAP13-2Q52LG2 175 aa11.27□□□□□ -0.61
CTSA-217ENST00000607482 KCNQ1DNQ9H478 68 aa11.27□□□□□ -0.61
CTSA-217ENST00000607482 HIST1H2BKO60814 126 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 HIST1H2BJP06899 126 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 HIST1H2BOP23527 126 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 HIST1H2BBP33778 126 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 HIST1H2BDP58876 126 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 HIST1H2BCP62807 126 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 HIST2H2BEQ16778 126 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.26□□□□□ -0.61
CTSA-217ENST00000607482 S100A7L2Q5SY68 101 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 LINC00337Q8N6G1 96 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 HIST1H2BHQ93079 126 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 HIST1H2BNQ99877 126 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 HIST1H2BMQ99879 126 aa11.26□□□□□ -0.61
CTSA-217ENST00000607482 SYS1-DBNDD2H3BUS1 97 aa11.25□□□□□ -0.61
CTSA-217ENST00000607482 DDTP30046 118 aa11.25□□□□□ -0.61
CTSA-217ENST00000607482 SPANXB1Q9NS25 103 aaPredicted RBP11.24□□□□□ -0.61
CTSA-217ENST00000607482 TRBV10-2A0A0K0K1G8 114 aa11.23□□□□□ -0.61
CTSA-217ENST00000607482 E9PLD3 99 aa11.23□□□□□ -0.61
CTSA-217ENST00000607482 NPC2P61916 151 aa11.23□□□□□ -0.61
CTSA-217ENST00000607482 SPRR4Q96PI1 79 aa11.23□□□□□ -0.61
CTSA-217ENST00000607482 C4orf48Q5BLP8 95 aa11.22□□□□□ -0.61
CTSA-217ENST00000607482 SMCR5Q8TEV8 140 aa11.22□□□□□ -0.61
CTSA-217ENST00000607482 RNF213Q63HN8 5207 aa11.21□□□□□ -0.61
CTSA-217ENST00000607482 LOC107984156A0A0G2JMH3 177 aa11.21□□□□□ -0.61
CTSA-217ENST00000607482 ARL17AQ8IVW1 177 aa11.21□□□□□ -0.61
CTSA-217ENST00000607482 LPAP08519 4548 aa11.21□□□□□ -0.62
CTSA-217ENST00000607482 A0A0J9YXY3 114 aa11.2□□□□□ -0.62
CTSA-217ENST00000607482 SPRR1AP35321 89 aa11.2□□□□□ -0.62
CTSA-217ENST00000607482 PET117Q6UWS5 81 aa11.2□□□□□ -0.62
CTSA-217ENST00000607482 PPDPFQ9H3Y8 114 aa11.2□□□□□ -0.62
CTSA-217ENST00000607482 C3orf22Q8N5N4 141 aa11.19□□□□□ -0.62
CTSA-217ENST00000607482 NDUFC2O95298 119 aa11.18□□□□□ -0.62
CTSA-217ENST00000607482 RETNLBQ9BQ08 111 aa11.18□□□□□ -0.62
CTSA-217ENST00000607482 KRTDAPP60985 99 aa11.17□□□□□ -0.62
CTSA-217ENST00000607482 SPAG11AQ6PDA7 123 aa11.17□□□□□ -0.62
CTSA-217ENST00000607482 CBY1Q9Y3M2 126 aa11.17□□□□□ -0.62
CTSA-217ENST00000607482 B5MCH6 92 aa11.16□□□□□ -0.62
CTSA-217ENST00000607482 HINT1P49773 126 aaPredicted RBP11.16□□□□□ -0.62
CTSA-217ENST00000607482 JOSD1Q15040 202 aaPredicted RBP11.16□□□□□ -0.62
CTSA-217ENST00000607482 LINC01545Q5VT33 79 aa11.16□□□□□ -0.62
CTSA-217ENST00000607482 GAGE2AQ6NT46 116 aa11.16□□□□□ -0.62
CTSA-217ENST00000607482 TRAV23DV6A0A075B6W5 121 aa11.15□□□□□ -0.62
CTSA-217ENST00000607482 C20orf202A1L168 122 aa11.15□□□□□ -0.62
CTSA-217ENST00000607482 ADAMTSL4-AS1Q5T5F5 129 aa11.15□□□□□ -0.62
CTSA-217ENST00000607482 ZNF815PA8K554 130 aa11.14□□□□□ -0.63
CTSA-217ENST00000607482 KRTAP4-16G5E9R7 235 aaPredicted RBP11.14□□□□□ -0.63
CTSA-217ENST00000607482 OR13C6PQ8NH95 151 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms