RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 IGLV10-54A0A075B6I4 117 aa8.5□□□□□ -1.05
MSH6-212ENST00000607272 FN1P02751 2386 aaKnown RBP8.5□□□□□ -1.05
MSH6-212ENST00000607272 ITPR3Q14573 2671 aa8.5□□□□□ -1.05
MSH6-212ENST00000607272 C20orf197Q8N268 126 aa8.5□□□□□ -1.05
MSH6-212ENST00000607272 TRAV7A0A075B6U4 112 aa8.49□□□□□ -1.05
MSH6-212ENST00000607272 LYRM9A8MSI8 78 aa8.49□□□□□ -1.05
MSH6-212ENST00000607272 OXTP01178 125 aa8.49□□□□□ -1.05
MSH6-212ENST00000607272 IGLV6-57P01721 117 aa8.49□□□□□ -1.05
MSH6-212ENST00000607272 FAM30AQ9NZY2 134 aa8.49□□□□□ -1.05
MSH6-212ENST00000607272 CCDC168Q8NDH2 2452 aa8.48□□□□□ -1.05
MSH6-212ENST00000607272 PRB1P04280 392 aa8.48□□□□□ -1.05
MSH6-212ENST00000607272 LINC01547P58512 204 aaPredicted RBP8.48□□□□□ -1.05
MSH6-212ENST00000607272 UBR5O95071 2799 aaPredicted RBP8.48□□□□□ -1.05
MSH6-212ENST00000607272 A0A0J9YWU9 116 aa8.48□□□□□ -1.05
MSH6-212ENST00000607272 IGHV4-30-4P0DP06 118 aa8.48□□□□□ -1.05
MSH6-212ENST00000607272 WFDC11Q8NEX6 87 aa8.48□□□□□ -1.05
MSH6-212ENST00000607272 C9orf66Q5T8R8 295 aa8.47□□□□□ -1.05
MSH6-212ENST00000607272 UNQ6190/PRO20217Q6UXQ8 127 aa8.47□□□□□ -1.05
MSH6-212ENST00000607272 ZFYVE26Q68DK2 2539 aa8.47□□□□□ -1.05
MSH6-212ENST00000607272 CXCL6P80162 114 aa8.46□□□□□ -1.05
MSH6-212ENST00000607272 HAMPP81172 84 aa8.46□□□□□ -1.05
MSH6-212ENST00000607272 SPAG11BQ08648 103 aa8.46□□□□□ -1.05
MSH6-212ENST00000607272 Q6ZVQ6 151 aa8.46□□□□□ -1.05
MSH6-212ENST00000607272 LINC00482Q8N8I6 264 aa8.46□□□□□ -1.05
MSH6-212ENST00000607272 APCP25054 2843 aa8.46□□□□□ -1.05
MSH6-212ENST00000607272 C10orf25Q5T742 122 aa8.46□□□□□ -1.06
MSH6-212ENST00000607272 Q6ZQY7 126 aa8.46□□□□□ -1.06
MSH6-212ENST00000607272 Q8N3U1 123 aa8.45□□□□□ -1.06
MSH6-212ENST00000607272 FAM236DA0A1B0GTK5 79 aa8.45□□□□□ -1.06
MSH6-212ENST00000607272 CYSRT1A8MQ03 144 aa8.45□□□□□ -1.06
MSH6-212ENST00000607272 FAM236CP0DP71 79 aa8.45□□□□□ -1.06
MSH6-212ENST00000607272 FLNAP21333 2647 aaKnown RBP8.44□□□□□ -1.06
MSH6-212ENST00000607272 GCN1Q92616 2671 aaKnown RBP8.44□□□□□ -1.06
MSH6-212ENST00000607272 M0R2N4 97 aa8.44□□□□□ -1.06
MSH6-212ENST00000607272 WIPF1O43516 503 aa8.44□□□□□ -1.06
MSH6-212ENST00000607272 LCE2AQ5TA79 106 aaPredicted RBP8.44□□□□□ -1.06
MSH6-212ENST00000607272 Q5XG85 94 aa8.44□□□□□ -1.06
MSH6-212ENST00000607272 GVQW2A0A096LPI5 108 aaPredicted RBP8.43□□□□□ -1.06
MSH6-212ENST00000607272 H7BZZ5 65 aa8.43□□□□□ -1.06
MSH6-212ENST00000607272 KLKP1Q107X0 134 aa8.43□□□□□ -1.06
MSH6-212ENST00000607272 C4orf26Q17RF5 130 aa8.42□□□□□ -1.06
MSH6-212ENST00000607272 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.42□□□□□ -1.06
MSH6-212ENST00000607272 ZNF843Q8N446 348 aa8.42□□□□□ -1.06
MSH6-212ENST00000607272 DIRC1Q969H9 104 aa8.42□□□□□ -1.06
MSH6-212ENST00000607272 NBEAL2Q6ZNJ1 2754 aa8.42□□□□□ -1.06
MSH6-212ENST00000607272 DAD1P61803 113 aa8.41□□□□□ -1.06
MSH6-212ENST00000607272 SERP1Q9Y6X1 66 aa8.41□□□□□ -1.06
MSH6-212ENST00000607272 LELP1Q5T871 98 aa8.41□□□□□ -1.06
MSH6-212ENST00000607272 SERTAD4-AS1Q5TG53 156 aa8.41□□□□□ -1.06
MSH6-212ENST00000607272 SPATA3Q8NHX4 192 aa8.41□□□□□ -1.06
MSH6-212ENST00000607272 PRR34Q9NV39 138 aa8.41□□□□□ -1.06
MSH6-212ENST00000607272 TRAV10A0A0B4J240 114 aa8.4□□□□□ -1.06
MSH6-212ENST00000607272 TRBV7-4A0A0J9YYF1 115 aa8.4□□□□□ -1.06
MSH6-212ENST00000607272 MTORP42345 2549 aa8.4□□□□□ -1.06
MSH6-212ENST00000607272 EPM2AB3EWF7 344 aa8.39□□□□□ -1.07
MSH6-212ENST00000607272 TRBV7-6A0A0J9YX20 115 aa8.39□□□□□ -1.07
MSH6-212ENST00000607272 ZNF73O43830 326 aaPredicted RBP8.39□□□□□ -1.07
MSH6-212ENST00000607272 DEFB4AO15263 64 aa8.38□□□□□ -1.07
MSH6-212ENST00000607272 COX7BP24311 80 aa8.38□□□□□ -1.07
MSH6-212ENST00000607272 KRTAP1-1Q07627 177 aa8.38□□□□□ -1.07
MSH6-212ENST00000607272 HRCT1Q6UXD1 115 aa8.38□□□□□ -1.07
MSH6-212ENST00000607272 DEFB135Q30KP9 77 aa8.38□□□□□ -1.07
MSH6-212ENST00000607272 KLK12Q9UKR0 248 aa8.38□□□□□ -1.07
MSH6-212ENST00000607272 ELOF1P60002 83 aaKnown RBP8.37□□□□□ -1.07
MSH6-212ENST00000607272 C6orf48Q9UBA6 75 aa8.37□□□□□ -1.07
MSH6-212ENST00000607272 NDUFC1O43677 76 aa8.37□□□□□ -1.07
MSH6-212ENST00000607272 APOC4P55056 127 aa8.36□□□□□ -1.07
MSH6-212ENST00000607272 XAGE1AQ9HD64 81 aa8.36□□□□□ -1.07
MSH6-212ENST00000607272 USP24Q9UPU5 2620 aa8.36□□□□□ -1.07
MSH6-212ENST00000607272 ACANP16112 2415 aa8.35□□□□□ -1.07
MSH6-212ENST00000607272 SNURFQ9Y675 71 aa8.35□□□□□ -1.07
MSH6-212ENST00000607272 MIFP14174 115 aa8.34□□□□□ -1.07
MSH6-212ENST00000607272 RMI2Q96E14 147 aa8.34□□□□□ -1.07
MSH6-212ENST00000607272 CELA1Q9UNI1 258 aa8.34□□□□□ -1.07
MSH6-212ENST00000607272 F8WEM9 126 aa8.33□□□□□ -1.08
MSH6-212ENST00000607272 SPART-AS1P0CW21 52 aa8.33□□□□□ -1.08
MSH6-212ENST00000607272 KRTAP10-3P60369 221 aa8.33□□□□□ -1.08
MSH6-212ENST00000607272 Q8NAQ8 132 aa8.33□□□□□ -1.08
MSH6-212ENST00000607272 M0R378 163 aa8.32□□□□□ -1.08
MSH6-212ENST00000607272 VPREB1P12018 145 aa8.32□□□□□ -1.08
MSH6-212ENST00000607272 TM2D3Q9BRN9 247 aa8.32□□□□□ -1.08
MSH6-212ENST00000607272 HTN3P15516 51 aa8.31□□□□□ -1.08
MSH6-212ENST00000607272 ATP5EP56381 51 aaPredicted RBP8.31□□□□□ -1.08
MSH6-212ENST00000607272 SCXQ7RTU7 201 aa8.31□□□□□ -1.08
MSH6-212ENST00000607272 EGFEM1PQ0D2K5 195 aa8.31□□□□□ -1.08
MSH6-212ENST00000607272 BPY2O14599 106 aa8.3□□□□□ -1.08
MSH6-212ENST00000607272 ERC2-IT1O76042 136 aa8.3□□□□□ -1.08
MSH6-212ENST00000607272 CAMK2N2Q96S95 79 aa8.3□□□□□ -1.08
MSH6-212ENST00000607272 SMIM26A0A096LP01 95 aa8.3□□□□□ -1.08
MSH6-212ENST00000607272 NREPQ16612 68 aa8.3□□□□□ -1.08
MSH6-212ENST00000607272 ANK3Q12955 4377 aaKnown RBP8.29□□□□□ -1.08
MSH6-212ENST00000607272 PLA2G1BP04054 148 aaKnown RBP8.29□□□□□ -1.08
MSH6-212ENST00000607272 HIVEP2P31629 2446 aa8.28□□□□□ -1.08
MSH6-212ENST00000607272 MRAPQ8TCY5 172 aa8.28□□□□□ -1.08
MSH6-212ENST00000607272 TMEM254Q8TBM7 123 aa8.27□□□□□ -1.08
MSH6-212ENST00000607272 A0A0A0MQY5 61 aa8.26□□□□□ -1.09
MSH6-212ENST00000607272 HIGD2BQ4VC39 106 aa8.26□□□□□ -1.09
MSH6-212ENST00000607272 PRYO14603 147 aa8.25□□□□□ -1.09
MSH6-212ENST00000607272 VWFP04275 2813 aa8.25□□□□□ -1.09
MSH6-212ENST00000607272 IGKV4-1P06312 121 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms