RNA–Protein interactions for RNA: ENST00000605216.5

ZSWIM8-223, Transcript of zinc finger SWIM-type containing 8, human

APPRIS P2 TSL 1 (best) BASIC

Gene ZSWIM8, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-223	ENST00000605216	ST20-AS1	Q8NBB2	130 aa		11.72	□□□□□ -0.53
ZSWIM8-223	ENST00000605216		H3BNG1	76 aa		11.72	□□□□□ -0.53
ZSWIM8-223	ENST00000605216	C16orf90	A8MZG2	172 aa		11.72	□□□□□ -0.53
ZSWIM8-223	ENST00000605216	COA5	Q86WW8	74 aa		11.72	□□□□□ -0.53
ZSWIM8-223	ENST00000605216	LINC00315	P59091	139 aa		11.71	□□□□□ -0.53
ZSWIM8-223	ENST00000605216		J3QL48	77 aa		11.71	□□□□□ -0.53
ZSWIM8-223	ENST00000605216	KIAA1549L	Q6ZVL6	1849 aa		11.71	□□□□□ -0.53
ZSWIM8-223	ENST00000605216	SMCP	P49901	116 aa	Predicted RBP	11.7	□□□□□ -0.54
ZSWIM8-223	ENST00000605216	PCDH15	Q96QU1	1955 aa		11.7	□□□□□ -0.54
ZSWIM8-223	ENST00000605216		A8MWP4	228 aa		11.7	□□□□□ -0.54
ZSWIM8-223	ENST00000605216	MRPL34	Q9BQ48	92 aa	Known RBP	11.7	□□□□□ -0.54
ZSWIM8-223	ENST00000605216	IGLV5-45	A0A087WSX0	123 aa		11.69	□□□□□ -0.54
ZSWIM8-223	ENST00000605216	CACNA1A	O00555	2505 aa		11.68	□□□□□ -0.54
ZSWIM8-223	ENST00000605216	TRBV7-4	A0A0J9YYF1	115 aa		11.68	□□□□□ -0.54
ZSWIM8-223	ENST00000605216	NAV3	Q8IVL0	2385 aa		11.68	□□□□□ -0.54
ZSWIM8-223	ENST00000605216	EXPH5	Q8NEV8	1989 aa		11.67	□□□□□ -0.54
ZSWIM8-223	ENST00000605216	NBDY	A0A0U1RRE5	68 aa		11.66	□□□□□ -0.54
ZSWIM8-223	ENST00000605216		A8MUN3	132 aa		11.66	□□□□□ -0.54
ZSWIM8-223	ENST00000605216	EML5	Q05BV3	1969 aa		11.65	□□□□□ -0.54
ZSWIM8-223	ENST00000605216	MIR22HG	Q0VDD5	57 aa		11.65	□□□□□ -0.54
ZSWIM8-223	ENST00000605216		A0A1W2PPR1	153 aa		11.63	□□□□□ -0.55
ZSWIM8-223	ENST00000605216	FAM19A4	Q96LR4	140 aa		11.62	□□□□□ -0.55
ZSWIM8-223	ENST00000605216	PCNX3	Q9H6A9	2034 aa		11.62	□□□□□ -0.55
ZSWIM8-223	ENST00000605216	ATG2A	Q2TAZ0	1938 aa		11.62	□□□□□ -0.55
ZSWIM8-223	ENST00000605216	CUL9	Q8IWT3	2517 aa		11.62	□□□□□ -0.55
ZSWIM8-223	ENST00000605216	ERC2-IT1	O76042	136 aa		11.61	□□□□□ -0.55
ZSWIM8-223	ENST00000605216	PRO0461	Q9UI25	63 aa		11.61	□□□□□ -0.55
ZSWIM8-223	ENST00000605216	AGRN	O00468	2067 aa		11.6	□□□□□ -0.55
ZSWIM8-223	ENST00000605216	C2CD3	Q4AC94	2353 aa		11.6	□□□□□ -0.55
ZSWIM8-223	ENST00000605216		K7EQZ3	153 aa		11.6	□□□□□ -0.55
ZSWIM8-223	ENST00000605216	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.6	□□□□□ -0.55
ZSWIM8-223	ENST00000605216	BDP1	A6H8Y1	2624 aa		11.58	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	C9orf129	Q5T035	196 aa	Known RBP	11.56	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	RAI1	Q7Z5J4	1906 aa	Predicted RBP	11.56	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	LINC00588	Q9Y4M8	146 aa		11.55	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	MYO18B	Q8IUG5	2567 aa		11.55	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	NAV2	Q8IVL1	2488 aa		11.55	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	DSCR10	P59022	87 aa		11.55	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	PRO3102	Q9H379	93 aa		11.55	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	CCDC168	Q8NDH2	2452 aa		11.55	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	IGLV6-57	P01721	117 aa		11.54	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	LTBP2	Q14767	1821 aa		11.53	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	ABCA2	Q9BZC7	2435 aa		11.53	□□□□□ -0.56
ZSWIM8-223	ENST00000605216	C8orf17	Q9NRJ1	99 aa		11.51	□□□□□ -0.57
ZSWIM8-223	ENST00000605216	CDC42SE1	Q9NRR8	79 aa		11.49	□□□□□ -0.57
ZSWIM8-223	ENST00000605216	FAM168B	A1KXE4	195 aa		11.48	□□□□□ -0.57
ZSWIM8-223	ENST00000605216	LINC00304	Q8N9R0	145 aa		11.48	□□□□□ -0.57
ZSWIM8-223	ENST00000605216	CD164	Q04900	197 aa		11.47	□□□□□ -0.57
ZSWIM8-223	ENST00000605216	COL4A4	P53420	1690 aa	Predicted RBP	11.47	□□□□□ -0.57
ZSWIM8-223	ENST00000605216	OBSCN-AS1	Q96MR7	158 aa		11.46	□□□□□ -0.57
ZSWIM8-223	ENST00000605216	IGLV1-50	A0A075B6I6	118 aa		11.46	□□□□□ -0.57
ZSWIM8-223	ENST00000605216	IGLV5-37	A0A075B6J1	123 aa		11.46	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	C9orf92	A6NGG3	77 aa		11.45	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	LUZP6	Q538Z0	58 aa		11.45	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	PRR15	Q8IV56	129 aa		11.45	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	LCA10	Q71F78	164 aa		11.45	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	WWC2-AS2	Q96NR7	200 aa		11.45	□□□□□ -0.58
ZSWIM8-223	ENST00000605216		A0A1B0GVX0	72 aa		11.44	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	LINC01554	Q52M75	96 aa		11.44	□□□□□ -0.58
ZSWIM8-223	ENST00000605216		Q8NAQ8	132 aa		11.44	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	IGFL1	Q6UW32	110 aa		11.44	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	RBM12B-AS1	Q9P1G2	102 aa		11.44	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	DNAH10OS	P0CZ25	163 aa		11.43	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	PTPRS	Q13332	1948 aa		11.43	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	KTN1-AS1	Q86SY8	53 aa		11.42	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	KCNQ1DN	Q9H478	68 aa		11.41	□□□□□ -0.58
ZSWIM8-223	ENST00000605216	TTC28	Q96AY4	2481 aa		11.4	□□□□□ -0.58
ZSWIM8-223	ENST00000605216		A0A0D9SG42	100 aa		11.4	□□□□□ -0.59
ZSWIM8-223	ENST00000605216	KRTAP24-1	Q3LI83	254 aa		11.38	□□□□□ -0.59
ZSWIM8-223	ENST00000605216	LITAF	Q99732	161 aa		11.38	□□□□□ -0.59
ZSWIM8-223	ENST00000605216	TET2	Q6N021	2002 aa	Predicted RBP	11.38	□□□□□ -0.59
ZSWIM8-223	ENST00000605216	LINC00528	Q8N1L1	170 aa		11.36	□□□□□ -0.59
ZSWIM8-223	ENST00000605216	CEP192	Q8TEP8	1941 aa		11.35	□□□□□ -0.59
ZSWIM8-223	ENST00000605216	KLKP1	Q107X0	134 aa		11.35	□□□□□ -0.59
ZSWIM8-223	ENST00000605216	ZNF861P	O60384	105 aa		11.34	□□□□□ -0.59
ZSWIM8-223	ENST00000605216	COL5A1	P20908	1838 aa	Predicted RBP	11.34	□□□□□ -0.59
ZSWIM8-223	ENST00000605216	FAM104A	Q969W3	186 aa		11.33	□□□□□ -0.6
ZSWIM8-223	ENST00000605216	IGLV5-48	A0A075B6I7	105 aa		11.31	□□□□□ -0.6
ZSWIM8-223	ENST00000605216	LRP4	O75096	1905 aa		11.31	□□□□□ -0.6
ZSWIM8-223	ENST00000605216	ADAMTS20	P59510	1910 aa		11.29	□□□□□ -0.6
ZSWIM8-223	ENST00000605216	MUC22	E2RYF6	1773 aa	Predicted RBP	11.29	□□□□□ -0.6
ZSWIM8-223	ENST00000605216	C10orf142	B7Z368	130 aa		11.28	□□□□□ -0.6
ZSWIM8-223	ENST00000605216	LINC00336	Q6ZUF6	198 aa		11.28	□□□□□ -0.6
ZSWIM8-223	ENST00000605216		Q8N377	158 aa		11.25	□□□□□ -0.61
ZSWIM8-223	ENST00000605216	CPAMD8	Q8IZJ3	1885 aa		11.25	□□□□□ -0.61
ZSWIM8-223	ENST00000605216	LINC00483	Q53H64	154 aa		11.25	□□□□□ -0.61
ZSWIM8-223	ENST00000605216	ZNF575	Q86XF7	245 aa		11.24	□□□□□ -0.61
ZSWIM8-223	ENST00000605216		Q8N1X5	172 aa		11.23	□□□□□ -0.61
ZSWIM8-223	ENST00000605216		H7BZZ5	65 aa		11.22	□□□□□ -0.61
ZSWIM8-223	ENST00000605216	C15orf56	Q8N910	161 aa		11.21	□□□□□ -0.61
ZSWIM8-223	ENST00000605216	SPANXA2-OT1	Q8N9U9	137 aa		11.21	□□□□□ -0.61
ZSWIM8-223	ENST00000605216		Q1T7F1	81 aa		11.2	□□□□□ -0.62
ZSWIM8-223	ENST00000605216		A0A0G2JQZ4	141 aa		11.2	□□□□□ -0.62
ZSWIM8-223	ENST00000605216		A0A1W2PNN7	141 aa		11.2	□□□□□ -0.62
ZSWIM8-223	ENST00000605216	SMR3B	P02814	79 aa	Predicted RBP	11.19	□□□□□ -0.62
ZSWIM8-223	ENST00000605216	IGLV7-43	P04211	117 aa		11.18	□□□□□ -0.62
ZSWIM8-223	ENST00000605216	PLA2G2D	Q9UNK4	145 aa		11.18	□□□□□ -0.62
ZSWIM8-223	ENST00000605216		A0A087WTM6	91 aa		11.17	□□□□□ -0.62
ZSWIM8-223	ENST00000605216	ANAPC11	Q9NYG5	84 aa		11.17	□□□□□ -0.62
ZSWIM8-223	ENST00000605216	CAMK2N1	Q7Z7J9	78 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 420 ms