RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 HSBP1O75506 76 aa6.31□□□□□ -1.4
TUBE1-210ENST00000604967 H0Y8G0 127 aa6.3□□□□□ -1.4
TUBE1-210ENST00000604967 M0R378 163 aa6.3□□□□□ -1.4
TUBE1-210ENST00000604967 SMIM13P0DJ93 91 aa6.3□□□□□ -1.4
TUBE1-210ENST00000604967 COX17Q14061 63 aa6.3□□□□□ -1.4
TUBE1-210ENST00000604967 KRTAP13-2Q52LG2 175 aa6.3□□□□□ -1.4
TUBE1-210ENST00000604967 PMCHL2Q9BQD1 86 aa6.3□□□□□ -1.4
TUBE1-210ENST00000604967 PRLHP81277 87 aa6.29□□□□□ -1.4
TUBE1-210ENST00000604967 NKAPP1Q8N9T2 125 aa6.29□□□□□ -1.4
TUBE1-210ENST00000604967 LEPROTL1O95214 131 aa6.28□□□□□ -1.4
TUBE1-210ENST00000604967 FABP4P15090 132 aa6.28□□□□□ -1.4
TUBE1-210ENST00000604967 LINC00158P58513 81 aa6.28□□□□□ -1.4
TUBE1-210ENST00000604967 TMEM126AQ9H061 195 aa6.28□□□□□ -1.4
TUBE1-210ENST00000604967 EIF4EBP3O60516 100 aaPredicted RBP6.27□□□□□ -1.41
TUBE1-210ENST00000604967 HIST1H2BKO60814 126 aa6.27□□□□□ -1.41
TUBE1-210ENST00000604967 HIST1H2BJP06899 126 aa6.27□□□□□ -1.41
TUBE1-210ENST00000604967 HIST1H2BOP23527 126 aa6.27□□□□□ -1.41
TUBE1-210ENST00000604967 HIST1H2BBP33778 126 aa6.27□□□□□ -1.41
TUBE1-210ENST00000604967 RPL28P46779 137 aaKnown RBP6.27□□□□□ -1.41
TUBE1-210ENST00000604967 HIST1H2BDP58876 126 aa6.27□□□□□ -1.41
TUBE1-210ENST00000604967 HIST1H2BCP62807 126 aa6.27□□□□□ -1.41
TUBE1-210ENST00000604967 HIST2H2BEQ16778 126 aa6.27□□□□□ -1.41
TUBE1-210ENST00000604967 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.27□□□□□ -1.41
TUBE1-210ENST00000604967 HIST1H2BHQ93079 126 aa6.27□□□□□ -1.41
TUBE1-210ENST00000604967 HIST1H2BNQ99877 126 aa6.27□□□□□ -1.41
TUBE1-210ENST00000604967 HIST1H2BMQ99879 126 aa6.27□□□□□ -1.41
TUBE1-210ENST00000604967 MIR7-3HGQ8N6C7 128 aa6.26□□□□□ -1.41
TUBE1-210ENST00000604967 DAND5Q8N907 189 aa6.26□□□□□ -1.41
TUBE1-210ENST00000604967 NDUFA12Q9UI09 145 aa6.26□□□□□ -1.41
TUBE1-210ENST00000604967 KRTAP4-16G5E9R7 235 aaPredicted RBP6.24□□□□□ -1.41
TUBE1-210ENST00000604967 LEPROTO15243 131 aa6.24□□□□□ -1.41
TUBE1-210ENST00000604967 UBE2AP49459 152 aa6.24□□□□□ -1.41
TUBE1-210ENST00000604967 NCR3O14931 201 aa6.23□□□□□ -1.41
TUBE1-210ENST00000604967 DPM2O94777 84 aa6.23□□□□□ -1.41
TUBE1-210ENST00000604967 RPL24P83731 157 aaKnown RBP6.23□□□□□ -1.41
TUBE1-210ENST00000604967 SFTA2Q6UW10 78 aa6.23□□□□□ -1.41
TUBE1-210ENST00000604967 SOSTDC1Q6X4U4 206 aa6.23□□□□□ -1.41
TUBE1-210ENST00000604967 FAM19A1Q7Z5A9 133 aa6.23□□□□□ -1.41
TUBE1-210ENST00000604967 BOD1L2Q8IYS8 172 aa6.23□□□□□ -1.41
TUBE1-210ENST00000604967 PLEKHB2Q96CS7 222 aa6.23□□□□□ -1.41
TUBE1-210ENST00000604967 J3QQQ9 107 aa6.22□□□□□ -1.41
TUBE1-210ENST00000604967 TSPAN13O95857 204 aa6.22□□□□□ -1.41
TUBE1-210ENST00000604967 RPL13AP40429 203 aaKnown RBP6.22□□□□□ -1.41
TUBE1-210ENST00000604967 MEIG1Q5JSS6 88 aa6.22□□□□□ -1.41
TUBE1-210ENST00000604967 ADAMTSL4-AS1Q5T5F5 129 aa6.22□□□□□ -1.41
TUBE1-210ENST00000604967 HSPB8Q9UJY1 196 aa6.22□□□□□ -1.41
TUBE1-210ENST00000604967 LOC107984156A0A0G2JMH3 177 aa6.21□□□□□ -1.42
TUBE1-210ENST00000604967 TRBV10-3A0A0K0K1G6 114 aa6.21□□□□□ -1.42
TUBE1-210ENST00000604967 MYMXA0A1B0GTQ4 84 aa6.21□□□□□ -1.42
TUBE1-210ENST00000604967 IGKCP01834 107 aa6.21□□□□□ -1.42
TUBE1-210ENST00000604967 PLNP26678 52 aa6.21□□□□□ -1.42
TUBE1-210ENST00000604967 SPRR1AP35321 89 aa6.21□□□□□ -1.42
TUBE1-210ENST00000604967 HERV-K104P63124 156 aa6.21□□□□□ -1.42
TUBE1-210ENST00000604967 ARL17AQ8IVW1 177 aa6.21□□□□□ -1.42
TUBE1-210ENST00000604967 C3orf22Q8N5N4 141 aa6.21□□□□□ -1.42
TUBE1-210ENST00000604967 CRYGAP11844 174 aa6.2□□□□□ -1.42
TUBE1-210ENST00000604967 SYS1-DBNDD2H3BUS1 97 aa6.19□□□□□ -1.42
TUBE1-210ENST00000604967 FAM229BQ4G0N7 80 aa6.19□□□□□ -1.42
TUBE1-210ENST00000604967 TYMSOSQ8TAI1 123 aa6.19□□□□□ -1.42
TUBE1-210ENST00000604967 LITAFQ99732 161 aa6.19□□□□□ -1.42
TUBE1-210ENST00000604967 TTTY13Q9BZ97 58 aa6.19□□□□□ -1.42
TUBE1-210ENST00000604967 KCNQ1DNQ9H478 68 aa6.19□□□□□ -1.42
TUBE1-210ENST00000604967 IGKV2D-26A0A0A0MRZ7 120 aa6.18□□□□□ -1.42
TUBE1-210ENST00000604967 A0A0J9YXY3 114 aa6.18□□□□□ -1.42
TUBE1-210ENST00000604967 ERC2-IT1O76042 136 aa6.18□□□□□ -1.42
TUBE1-210ENST00000604967 LINC01545Q5VT33 79 aa6.18□□□□□ -1.42
TUBE1-210ENST00000604967 SMCR5Q8TEV8 140 aa6.18□□□□□ -1.42
TUBE1-210ENST00000604967 SPRR4Q96PI1 79 aa6.18□□□□□ -1.42
TUBE1-210ENST00000604967 MAP1LC3CQ9BXW4 147 aa6.18□□□□□ -1.42
TUBE1-210ENST00000604967 E9PLD3 99 aa6.17□□□□□ -1.42
TUBE1-210ENST00000604967 PRYO14603 147 aa6.17□□□□□ -1.42
TUBE1-210ENST00000604967 C3orf79P0CE67 100 aa6.17□□□□□ -1.42
TUBE1-210ENST00000604967 COA6Q5JTJ3 125 aaKnown RBP6.17□□□□□ -1.42
TUBE1-210ENST00000604967 HIGD2AQ9BW72 106 aa6.17□□□□□ -1.42
TUBE1-210ENST00000604967 NPC2P61916 151 aa6.16□□□□□ -1.42
TUBE1-210ENST00000604967 PRR4Q16378 134 aa6.16□□□□□ -1.42
TUBE1-210ENST00000604967 LINC00337Q8N6G1 96 aa6.16□□□□□ -1.42
TUBE1-210ENST00000604967 RETNLBQ9BQ08 111 aa6.16□□□□□ -1.42
TUBE1-210ENST00000604967 Q9BRP9 147 aa6.16□□□□□ -1.42
TUBE1-210ENST00000604967 B5MCH6 92 aa6.15□□□□□ -1.42
TUBE1-210ENST00000604967 ATP6V1G1O75348 118 aa6.15□□□□□ -1.42
TUBE1-210ENST00000604967 IGLV6-57P01721 117 aa6.15□□□□□ -1.42
TUBE1-210ENST00000604967 LGALS3P17931 250 aaKnown RBP6.15□□□□□ -1.42
TUBE1-210ENST00000604967 NMUP48645 174 aa6.15□□□□□ -1.42
TUBE1-210ENST00000604967 MUC2Q02817 5179 aa6.14□□□□□ -1.43
TUBE1-210ENST00000604967 HERVK_113P61574 105 aa6.14□□□□□ -1.43
TUBE1-210ENST00000604967 TRBV10-2A0A0K0K1G8 114 aa6.13□□□□□ -1.43
TUBE1-210ENST00000604967 LINC00587B1AMM8 73 aa6.13□□□□□ -1.43
TUBE1-210ENST00000604967 LCE2DQ5TA82 110 aaPredicted RBP6.13□□□□□ -1.43
TUBE1-210ENST00000604967 PET117Q6UWS5 81 aa6.13□□□□□ -1.43
TUBE1-210ENST00000604967 LINC00304Q8N9R0 145 aa6.13□□□□□ -1.43
TUBE1-210ENST00000604967 PPDPFQ9H3Y8 114 aa6.13□□□□□ -1.43
TUBE1-210ENST00000604967 NDUFC2O95298 119 aa6.12□□□□□ -1.43
TUBE1-210ENST00000604967 DDTP30046 118 aa6.12□□□□□ -1.43
TUBE1-210ENST00000604967 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
TUBE1-210ENST00000604967 SPANXB1Q9NS25 103 aaPredicted RBP6.12□□□□□ -1.43
TUBE1-210ENST00000604967 LINC00483Q53H64 154 aa6.11□□□□□ -1.43
TUBE1-210ENST00000604967 LINC00308Q8TCZ7 52 aa6.11□□□□□ -1.43
TUBE1-210ENST00000604967 ETDCA0A1B0GVM5 59 aa6.1□□□□□ -1.43
TUBE1-210ENST00000604967 KRTDAPP60985 99 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms