RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	LRP2	P98164	4655 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	TGIF2-C20orf24	A0A0A6YYL0	155 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	IGHV3OR16-9	A0A0B4J2B5	98 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	ZNF727	A8MUV8	499 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740		F8W036	122 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	NDUFA1	O15239	70 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	CKS2	P33552	79 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	RPL13A	P40429	203 aa	Known RBP	1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	SPAG11B	Q08648	103 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	C9orf116	Q5BN46	136 aa	Predicted RBP	1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	FAM104B	Q5XKR9	115 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	SLC7A5P1	Q8MH63	180 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	EIF5A2	Q9GZV4	153 aa	Known RBP	1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	NAT8B	Q9UHF3	227 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	CARHSP1	Q9Y2V2	147 aa	Known RBP	1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	UBE2D4	Q9Y2X8	147 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	CBY1	Q9Y3M2	126 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	TNXB	P22105	4242 aa		1.63	□□□□□ -2.15
LAMA4-222	ENST00000604740	TRAV13-1	A0A0B4J241	112 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	TRBV30	A0A0K0K1B3	111 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740		A0A0U1RQV1	116 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740		A0A1W2PNN7	141 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	SMIM27	A0A1W2PRY6	76 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	LINC01549	A6NIU2	74 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740		K7EMI3	77 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	IGLV7-43	P04211	117 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	SRP19	P09132	144 aa	Known RBP	1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	RAB5A	P20339	215 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	G0S2	P27469	103 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	IFI27	P40305	119 aa	Predicted RBP	1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	CEBPG	P53567	150 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	SEC11A	P67812	179 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	HBB	P68871	147 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	RPL18A	Q02543	176 aa	Known RBP	1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	MRPL51	Q4U2R6	128 aa	Known RBP	1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	C1orf137	Q5JT78	98 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	ALKAL2	Q6UX46	152 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740		Q6ZUT4	128 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	ATP5L2	Q7Z4Y8	100 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	C5orf38	Q86SI9	138 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	AKAP14	Q86UN6	197 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	AMN1	Q8IY45	258 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	ORAOV1	Q8WV07	137 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	LINC00526	Q96FQ7	95 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	SMIM2	Q9BVW6	85 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	NAT8	Q9UHE5	227 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	LAMTOR2	Q9Y2Q5	125 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740		V9GYV3	84 aa		1.62	□□□□□ -2.15
LAMA4-222	ENST00000604740	RNF213	Q63HN8	5207 aa		1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740		A0A1B0GXF2	115 aa		1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740	NDUFC2-KCTD14	E9PQ53	114 aa		1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740	NUPR1	O60356	82 aa		1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740	ATP5L	O75964	103 aa		1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740	RPL23	P62829	140 aa	Known RBP	1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740	PEA15	Q15121	130 aa		1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740		Q6ZN92	141 aa		1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740	PHF5A	Q7RTV0	110 aa	Known RBP	1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740	ORMDL3	Q8N138	153 aa		1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740	TMEM141	Q96I45	108 aa		1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740	PACRG	Q96M98	296 aa	Predicted RBP	1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740	C2orf88	Q9BSF0	95 aa		1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740	TP73-AS1	Q9UF72	201 aa		1.61	□□□□□ -2.15
LAMA4-222	ENST00000604740		D6R8Y8	96 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	SMKR1	H3BMG3	65 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740		M0QXV9	152 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	NPY	P01303	97 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	CXCL5	P42830	114 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	RPL28	P46779	137 aa	Known RBP	1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	UBE2D1	P51668	147 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	CKS1B	P61024	79 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	RPL39	P62891	51 aa	Known RBP	1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	UBE2B	P63146	152 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	KIAA0087	Q14695	138 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	ADIRF	Q15847	76 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	ORMDL2	Q53FV1	153 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	RNASE13	Q5GAN3	156 aa	Known RBP	1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	UNQ6190/PRO20217	Q6UXQ8	127 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	TEX43	Q6ZNM6	134 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	TMEM136	Q6ZRR5	245 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	FAM19A3	Q7Z5A8	133 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740		Q8IZM0	81 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	PRELID3A	Q96N28	172 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	PPDPF	Q9H3Y8	114 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	MAP1LC3A	Q9H492	121 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	NXT2	Q9NPJ8	142 aa	Known RBP	1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	C6orf48	Q9UBA6	75 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740	CYSLTR1	Q9Y271	337 aa		1.6	□□□□□ -2.15
LAMA4-222	ENST00000604740		F8VRH5	84 aa		1.59	□□□□□ -2.15
LAMA4-222	ENST00000604740	MT-ND4L	P03901	98 aa		1.59	□□□□□ -2.15
LAMA4-222	ENST00000604740	CRYGA	P11844	174 aa		1.59	□□□□□ -2.15
LAMA4-222	ENST00000604740	HERVK_113	P63121	156 aa		1.59	□□□□□ -2.15
LAMA4-222	ENST00000604740	MRPL54	Q6P161	138 aa	Known RBP	1.59	□□□□□ -2.15
LAMA4-222	ENST00000604740	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	1.59	□□□□□ -2.15
LAMA4-222	ENST00000604740		Q8N8P6	123 aa		1.59	□□□□□ -2.15
LAMA4-222	ENST00000604740	AMELX	Q99217	191 aa		1.59	□□□□□ -2.15
LAMA4-222	ENST00000604740	TIMM17A	Q99595	171 aa		1.59	□□□□□ -2.15
LAMA4-222	ENST00000604740	TRAV9-1	A0A075B6T8	112 aa		1.58	□□□□□ -2.16
LAMA4-222	ENST00000604740	IGIP	A6NJ69	53 aa		1.58	□□□□□ -2.16
LAMA4-222	ENST00000604740	BCE1	O60756	84 aa		1.58	□□□□□ -2.16

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