RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 H7BZZ5 65 aa10.34□□□□□ -0.75
LYSMD4-211ENST00000604213 HRCT1Q6UXD1 115 aa10.34□□□□□ -0.75
LYSMD4-211ENST00000604213 UNQ6190/PRO20217Q6UXQ8 127 aa10.34□□□□□ -0.75
LYSMD4-211ENST00000604213 C16orf95Q9H693 158 aa10.34□□□□□ -0.75
LYSMD4-211ENST00000604213 HAMPP81172 84 aa10.34□□□□□ -0.75
LYSMD4-211ENST00000604213 TRAV10A0A0B4J240 114 aa10.33□□□□□ -0.76
LYSMD4-211ENST00000604213 ITPR3Q14573 2671 aa10.33□□□□□ -0.76
LYSMD4-211ENST00000604213 EPM2AB3EWF7 344 aa10.33□□□□□ -0.76
LYSMD4-211ENST00000604213 C9orf66Q5T8R8 295 aa10.33□□□□□ -0.76
LYSMD4-211ENST00000604213 Q6ZQY7 126 aa10.33□□□□□ -0.76
LYSMD4-211ENST00000604213 ZNF843Q8N446 348 aa10.33□□□□□ -0.76
LYSMD4-211ENST00000604213 BAHCC1Q9P281 2608 aa10.32□□□□□ -0.76
LYSMD4-211ENST00000604213 PRB1P04280 392 aa10.32□□□□□ -0.76
LYSMD4-211ENST00000604213 MUC7Q8TAX7 377 aa10.32□□□□□ -0.76
LYSMD4-211ENST00000604213 ZNF462Q96JM2 2506 aa10.31□□□□□ -0.76
LYSMD4-211ENST00000604213 SPAG11BQ08648 103 aa10.31□□□□□ -0.76
LYSMD4-211ENST00000604213 A0A0J9YWU9 116 aa10.31□□□□□ -0.76
LYSMD4-211ENST00000604213 IGHV4-30-4P0DP06 118 aa10.31□□□□□ -0.76
LYSMD4-211ENST00000604213 PDE6GP18545 87 aa10.31□□□□□ -0.76
LYSMD4-211ENST00000604213 CXCL6P80162 114 aa10.31□□□□□ -0.76
LYSMD4-211ENST00000604213 KLKP1Q107X0 134 aa10.3□□□□□ -0.76
LYSMD4-211ENST00000604213 ZFYVE26Q68DK2 2539 aa10.3□□□□□ -0.76
LYSMD4-211ENST00000604213 CYSRT1A8MQ03 144 aa10.3□□□□□ -0.76
LYSMD4-211ENST00000604213 WFDC11Q8NEX6 87 aa10.3□□□□□ -0.76
LYSMD4-211ENST00000604213 SERP1Q9Y6X1 66 aa10.3□□□□□ -0.76
LYSMD4-211ENST00000604213 H3BQ85 93 aa10.29□□□□□ -0.76
LYSMD4-211ENST00000604213 UBR5O95071 2799 aaPredicted RBP10.29□□□□□ -0.76
LYSMD4-211ENST00000604213 NBEAL2Q6ZNJ1 2754 aa10.29□□□□□ -0.76
LYSMD4-211ENST00000604213 APCP25054 2843 aa10.28□□□□□ -0.76
LYSMD4-211ENST00000604213 GCN1Q92616 2671 aaKnown RBP10.28□□□□□ -0.76
LYSMD4-211ENST00000604213 LYRM9A8MSI8 78 aa10.28□□□□□ -0.76
LYSMD4-211ENST00000604213 SNURFQ9Y675 71 aa10.26□□□□□ -0.77
LYSMD4-211ENST00000604213 CCDC168Q8NDH2 2452 aa10.26□□□□□ -0.77
LYSMD4-211ENST00000604213 TRBV7-4A0A0J9YYF1 115 aa10.26□□□□□ -0.77
LYSMD4-211ENST00000604213 RMI2Q96E14 147 aa10.26□□□□□ -0.77
LYSMD4-211ENST00000604213 DEFB4AO15263 64 aa10.25□□□□□ -0.77
LYSMD4-211ENST00000604213 DIRC1Q969H9 104 aa10.25□□□□□ -0.77
LYSMD4-211ENST00000604213 GVQW2A0A096LPI5 108 aaPredicted RBP10.24□□□□□ -0.77
LYSMD4-211ENST00000604213 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.24□□□□□ -0.77
LYSMD4-211ENST00000604213 FLNAP21333 2647 aaKnown RBP10.24□□□□□ -0.77
LYSMD4-211ENST00000604213 ANK3Q12955 4377 aaKnown RBP10.24□□□□□ -0.77
LYSMD4-211ENST00000604213 SCXQ7RTU7 201 aa10.23□□□□□ -0.77
LYSMD4-211ENST00000604213 FASNP49327 2511 aaKnown RBP10.23□□□□□ -0.77
LYSMD4-211ENST00000604213 ZNF73O43830 326 aaPredicted RBP10.22□□□□□ -0.77
LYSMD4-211ENST00000604213 TM2D3Q9BRN9 247 aa10.22□□□□□ -0.77
LYSMD4-211ENST00000604213 XAGE1AQ9HD64 81 aa10.22□□□□□ -0.77
LYSMD4-211ENST00000604213 C6orf48Q9UBA6 75 aa10.22□□□□□ -0.77
LYSMD4-211ENST00000604213 F8WEM9 126 aa10.22□□□□□ -0.77
LYSMD4-211ENST00000604213 COX7BP24311 80 aa10.22□□□□□ -0.77
LYSMD4-211ENST00000604213 KRTAP1-1Q07627 177 aa10.22□□□□□ -0.77
LYSMD4-211ENST00000604213 PRR34Q9NV39 138 aa10.22□□□□□ -0.77
LYSMD4-211ENST00000604213 TRBV7-6A0A0J9YX20 115 aa10.21□□□□□ -0.78
LYSMD4-211ENST00000604213 ELOF1P60002 83 aaKnown RBP10.2□□□□□ -0.78
LYSMD4-211ENST00000604213 DAD1P61803 113 aa10.2□□□□□ -0.78
LYSMD4-211ENST00000604213 LELP1Q5T871 98 aa10.2□□□□□ -0.78
LYSMD4-211ENST00000604213 KLK12Q9UKR0 248 aa10.2□□□□□ -0.78
LYSMD4-211ENST00000604213 KRTAP10-3P60369 221 aa10.19□□□□□ -0.78
LYSMD4-211ENST00000604213 DEFB135Q30KP9 77 aa10.19□□□□□ -0.78
LYSMD4-211ENST00000604213 CELA1Q9UNI1 258 aa10.18□□□□□ -0.78
LYSMD4-211ENST00000604213 MTORP42345 2549 aa10.17□□□□□ -0.78
LYSMD4-211ENST00000604213 NDUFC1O43677 76 aa10.17□□□□□ -0.78
LYSMD4-211ENST00000604213 VPREB1P12018 145 aa10.16□□□□□ -0.78
LYSMD4-211ENST00000604213 NREPQ16612 68 aa10.16□□□□□ -0.78
LYSMD4-211ENST00000604213 FP248Q71RG6 208 aaPredicted RBP10.16□□□□□ -0.78
LYSMD4-211ENST00000604213 SMIM26A0A096LP01 95 aa10.15□□□□□ -0.78
LYSMD4-211ENST00000604213 MIFP14174 115 aa10.15□□□□□ -0.79
LYSMD4-211ENST00000604213 BPY2O14599 106 aa10.14□□□□□ -0.79
LYSMD4-211ENST00000604213 ACANP16112 2415 aa10.14□□□□□ -0.79
LYSMD4-211ENST00000604213 HTN3P15516 51 aa10.14□□□□□ -0.79
LYSMD4-211ENST00000604213 Q8NAQ8 132 aa10.13□□□□□ -0.79
LYSMD4-211ENST00000604213 MRAPQ8TCY5 172 aa10.13□□□□□ -0.79
LYSMD4-211ENST00000604213 LINC00336Q6ZUF6 198 aa10.12□□□□□ -0.79
LYSMD4-211ENST00000604213 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
LYSMD4-211ENST00000604213 M0R378 163 aa10.11□□□□□ -0.79
LYSMD4-211ENST00000604213 ERC2-IT1O76042 136 aa10.11□□□□□ -0.79
LYSMD4-211ENST00000604213 TMEM254Q8TBM7 123 aa10.11□□□□□ -0.79
LYSMD4-211ENST00000604213 IGKV4-1P06312 121 aa10.11□□□□□ -0.79
LYSMD4-211ENST00000604213 ATP5EP56381 51 aaPredicted RBP10.11□□□□□ -0.79
LYSMD4-211ENST00000604213 Q8N9L7 120 aa10.11□□□□□ -0.79
LYSMD4-211ENST00000604213 HIGD2BQ4VC39 106 aa10.1□□□□□ -0.79
LYSMD4-211ENST00000604213 APOC4P55056 127 aa10.1□□□□□ -0.79
LYSMD4-211ENST00000604213 CAMK2N2Q96S95 79 aa10.09□□□□□ -0.79
LYSMD4-211ENST00000604213 SPART-AS1P0CW21 52 aa10.09□□□□□ -0.79
LYSMD4-211ENST00000604213 LINC00474Q9P2X8 69 aa10.09□□□□□ -0.79
LYSMD4-211ENST00000604213 PRO0628Q9UI54 55 aa10.09□□□□□ -0.79
LYSMD4-211ENST00000604213 VWFP04275 2813 aa10.08□□□□□ -0.8
LYSMD4-211ENST00000604213 EGFEM1PQ0D2K5 195 aa10.08□□□□□ -0.8
LYSMD4-211ENST00000604213 Q6ZRU5 148 aa10.07□□□□□ -0.8
LYSMD4-211ENST00000604213 OCR1Q9BZK8 76 aa10.07□□□□□ -0.8
LYSMD4-211ENST00000604213 KRTAP26-1Q6PEX3 210 aa10.06□□□□□ -0.8
LYSMD4-211ENST00000604213 A0A0U1RQV1 116 aa10.05□□□□□ -0.8
LYSMD4-211ENST00000604213 HIVEP2P31629 2446 aa10.05□□□□□ -0.8
LYSMD4-211ENST00000604213 PDZD2O15018 2839 aa10.05□□□□□ -0.8
LYSMD4-211ENST00000604213 FLNBO75369 2602 aaKnown RBP10.04□□□□□ -0.8
LYSMD4-211ENST00000604213 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
LYSMD4-211ENST00000604213 PRYO14603 147 aa10.02□□□□□ -0.8
LYSMD4-211ENST00000604213 WFDC10BQ8IUB3 73 aa10.02□□□□□ -0.8
LYSMD4-211ENST00000604213 HELZ2Q9BYK8 2649 aaKnown RBP10.02□□□□□ -0.81
LYSMD4-211ENST00000604213 C3orf84H3BNL1 204 aa10.01□□□□□ -0.81
LYSMD4-211ENST00000604213 Q6ZRP5 223 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms