RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 C7orf77A4D0Y5 90 aa3.68□□□□□ -1.82
LINC00343-209ENST00000601607 S100A1P23297 94 aa3.68□□□□□ -1.82
LINC00343-209ENST00000601607 FOXA3P55318 350 aaPredicted RBP3.68□□□□□ -1.82
LINC00343-209ENST00000601607 KIAA0087Q14695 138 aa3.68□□□□□ -1.82
LINC00343-209ENST00000601607 GNG13Q9P2W3 67 aa3.68□□□□□ -1.82
LINC00343-209ENST00000601607 MUC12Q9UKN1 5478 aa3.68□□□□□ -1.82
LINC00343-209ENST00000601607 IGHV3OR16-9A0A0B4J2B5 98 aa3.67□□□□□ -1.82
LINC00343-209ENST00000601607 F2Z2F3 143 aa3.67□□□□□ -1.82
LINC00343-209ENST00000601607 RPS20P60866 119 aaKnown RBP3.67□□□□□ -1.82
LINC00343-209ENST00000601607 FAM231DQ6ZW35 169 aa3.67□□□□□ -1.82
LINC00343-209ENST00000601607 TRBV6-5A0A0K0K1A5 114 aa3.66□□□□□ -1.82
LINC00343-209ENST00000601607 PRLHP81277 87 aa3.66□□□□□ -1.82
LINC00343-209ENST00000601607 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
LINC00343-209ENST00000601607 LINC01551Q86U37 167 aa3.66□□□□□ -1.82
LINC00343-209ENST00000601607 SLC7A5P1Q8MH63 180 aa3.66□□□□□ -1.82
LINC00343-209ENST00000601607 TP73-AS1Q9UF72 201 aa3.66□□□□□ -1.82
LINC00343-209ENST00000601607 NDUFA12Q9UI09 145 aa3.66□□□□□ -1.82
LINC00343-209ENST00000601607 CSDC2Q9Y534 153 aaKnown RBP3.66□□□□□ -1.82
LINC00343-209ENST00000601607 ZNF727A8MUV8 499 aa3.65□□□□□ -1.83
LINC00343-209ENST00000601607 RPL35P42766 123 aaKnown RBP3.65□□□□□ -1.83
LINC00343-209ENST00000601607 YPEL4Q96NS1 127 aa3.65□□□□□ -1.83
LINC00343-209ENST00000601607 CNFNQ9BYD5 112 aa3.65□□□□□ -1.83
LINC00343-209ENST00000601607 EIF5A2Q9GZV4 153 aaKnown RBP3.65□□□□□ -1.83
LINC00343-209ENST00000601607 ST20Q9HBF5 79 aa3.65□□□□□ -1.83
LINC00343-209ENST00000601607 OSTCQ9NRP0 149 aa3.65□□□□□ -1.83
LINC00343-209ENST00000601607 NAT8Q9UHE5 227 aa3.65□□□□□ -1.83
LINC00343-209ENST00000601607 XKRY2A2RUG3 117 aa3.64□□□□□ -1.83
LINC00343-209ENST00000601607 RPL23P62829 140 aaKnown RBP3.64□□□□□ -1.83
LINC00343-209ENST00000601607 RHEBQ15382 184 aa3.64□□□□□ -1.83
LINC00343-209ENST00000601607 SVBPQ8N300 66 aa3.64□□□□□ -1.83
LINC00343-209ENST00000601607 PLEKHB2Q96CS7 222 aa3.64□□□□□ -1.83
LINC00343-209ENST00000601607 SMIM7Q9BQ49 75 aa3.64□□□□□ -1.83
LINC00343-209ENST00000601607 BIN3Q9NQY0 253 aa3.64□□□□□ -1.83
LINC00343-209ENST00000601607 TRAV9-1A0A075B6T8 112 aa3.63□□□□□ -1.83
LINC00343-209ENST00000601607 TRBV27A0A0K0K1C4 114 aa3.63□□□□□ -1.83
LINC00343-209ENST00000601607 K7EN84 100 aa3.63□□□□□ -1.83
LINC00343-209ENST00000601607 SNAPINO95295 136 aa3.63□□□□□ -1.83
LINC00343-209ENST00000601607 SPINK1P00995 79 aa3.63□□□□□ -1.83
LINC00343-209ENST00000601607 FCER1GP30273 86 aa3.63□□□□□ -1.83
LINC00343-209ENST00000601607 POLR2KP53803 58 aaKnown RBP3.63□□□□□ -1.83
LINC00343-209ENST00000601607 RPL32P62910 135 aaKnown RBP3.63□□□□□ -1.83
LINC00343-209ENST00000601607 CENPWQ5EE01 88 aa3.63□□□□□ -1.83
LINC00343-209ENST00000601607 TRBV24-1A0A075B6N3 115 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 IGKV2-28A0A075B6P5 120 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 A0A1B0GV50 99 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 F8W036 122 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 PPP1R2P9O14990 202 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 IGKV2D-28P01615 120 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 GNG4P50150 75 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 SMAGPQ0VAQ4 97 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 SMIM15Q7Z3B0 74 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 FAM19A2Q8N3H0 131 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 FAM104AQ969W3 186 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 V9GYV3 84 aa3.62□□□□□ -1.83
LINC00343-209ENST00000601607 TGIF2-C20orf24A0A0A6YYL0 155 aa3.61□□□□□ -1.83
LINC00343-209ENST00000601607 SMIM27A0A1W2PRY6 76 aa3.61□□□□□ -1.83
LINC00343-209ENST00000601607 SCO1O75880 301 aa3.61□□□□□ -1.83
LINC00343-209ENST00000601607 MT-ND4LP03901 98 aa3.61□□□□□ -1.83
LINC00343-209ENST00000601607 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
LINC00343-209ENST00000601607 FAM19A1Q7Z5A9 133 aa3.61□□□□□ -1.83
LINC00343-209ENST00000601607 A0A1B0GXF2 115 aa3.6□□□□□ -1.83
LINC00343-209ENST00000601607 APOC3P02656 99 aa3.6□□□□□ -1.83
LINC00343-209ENST00000601607 RPL39P62891 51 aaKnown RBP3.6□□□□□ -1.83
LINC00343-209ENST00000601607 SPRR4Q96PI1 79 aa3.6□□□□□ -1.83
LINC00343-209ENST00000601607 TIMM21Q9BVV7 248 aa3.6□□□□□ -1.83
LINC00343-209ENST00000601607 A0A0U1RRA0 63 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 C9orf92A6NGG3 77 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 A8MWL6 223 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 TMEM238C9JI98 176 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 E9PLD3 99 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 SLC25A20O43772 301 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 CKS1BP61024 79 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 HBBP68871 147 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 ATP5L2Q7Z4Y8 100 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 CBLN2Q8IUK8 224 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 Q8N9L7 120 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 HIGD2AQ9BW72 106 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 SMCO4Q9NRQ5 59 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 TOMM7Q9P0U1 55 aa3.59□□□□□ -1.83
LINC00343-209ENST00000601607 A0A1B0GW15 77 aa3.58□□□□□ -1.84
LINC00343-209ENST00000601607 COLCA2A8K830 154 aa3.58□□□□□ -1.84
LINC00343-209ENST00000601607 SMKR1H3BMG3 65 aa3.58□□□□□ -1.84
LINC00343-209ENST00000601607 COX19Q49B96 90 aa3.58□□□□□ -1.84
LINC00343-209ENST00000601607 NKAPP1Q8N9T2 125 aa3.58□□□□□ -1.84
LINC00343-209ENST00000601607 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
LINC00343-209ENST00000601607 TMEM126AQ9H061 195 aa3.58□□□□□ -1.84
LINC00343-209ENST00000601607 RPS29P62273 56 aaKnown RBP3.57□□□□□ -1.84
LINC00343-209ENST00000601607 ADIRFQ15847 76 aa3.57□□□□□ -1.84
LINC00343-209ENST00000601607 GNB1LQ9BYB4 327 aa3.57□□□□□ -1.84
LINC00343-209ENST00000601607 M0R378 163 aa3.56□□□□□ -1.84
LINC00343-209ENST00000601607 GATCO43716 136 aaKnown RBP3.56□□□□□ -1.84
LINC00343-209ENST00000601607 MT2AP02795 61 aa3.56□□□□□ -1.84
LINC00343-209ENST00000601607 MRPS36P82909 103 aaKnown RBP3.56□□□□□ -1.84
LINC00343-209ENST00000601607 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
LINC00343-209ENST00000601607 C6orf226Q5I0X4 101 aa3.56□□□□□ -1.84
LINC00343-209ENST00000601607 Q6Q795 121 aa3.56□□□□□ -1.84
LINC00343-209ENST00000601607 AMN1Q8IY45 258 aa3.56□□□□□ -1.84
LINC00343-209ENST00000601607 SPANXA1Q9NS26 97 aa3.56□□□□□ -1.84
LINC00343-209ENST00000601607 LINC00846Q9NV44 126 aa3.56□□□□□ -1.84
LINC00343-209ENST00000601607 NAT8BQ9UHF3 227 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms