RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TSPAN13O95857 204 aa9.28□□□□□ -0.92
VRK3-221ENST00000600284 LINC00158P58513 81 aa9.28□□□□□ -0.92
VRK3-221ENST00000600284 FAM19A1Q7Z5A9 133 aa9.28□□□□□ -0.92
VRK3-221ENST00000600284 ANAPC11Q9NYG5 84 aa9.28□□□□□ -0.92
VRK3-221ENST00000600284 M0R378 163 aa9.27□□□□□ -0.93
VRK3-221ENST00000600284 KRTAP13-2Q52LG2 175 aa9.27□□□□□ -0.93
VRK3-221ENST00000600284 Q8NDZ9 215 aa9.27□□□□□ -0.93
VRK3-221ENST00000600284 TMEM238C9JI98 176 aa9.26□□□□□ -0.93
VRK3-221ENST00000600284 PRLHP81277 87 aa9.26□□□□□ -0.93
VRK3-221ENST00000600284 HSBP1O75506 76 aa9.25□□□□□ -0.93
VRK3-221ENST00000600284 CTAG1AP78358 180 aa9.25□□□□□ -0.93
VRK3-221ENST00000600284 LINC00587B1AMM8 73 aa9.24□□□□□ -0.93
VRK3-221ENST00000600284 ATP6V1G1O75348 118 aa9.24□□□□□ -0.93
VRK3-221ENST00000600284 HERV-K104P63124 156 aa9.24□□□□□ -0.93
VRK3-221ENST00000600284 PLEKHB2Q96CS7 222 aa9.24□□□□□ -0.93
VRK3-221ENST00000600284 IGKV2D-26A0A0A0MRZ7 120 aa9.23□□□□□ -0.93
VRK3-221ENST00000600284 CBLN2Q8IUK8 224 aa9.23□□□□□ -0.93
VRK3-221ENST00000600284 A0A0U1RRA0 63 aa9.22□□□□□ -0.93
VRK3-221ENST00000600284 SMIM13P0DJ93 91 aa9.22□□□□□ -0.93
VRK3-221ENST00000600284 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
VRK3-221ENST00000600284 LINC00304Q8N9R0 145 aa9.22□□□□□ -0.93
VRK3-221ENST00000600284 MEIG1Q5JSS6 88 aa9.21□□□□□ -0.94
VRK3-221ENST00000600284 MYMXA0A1B0GTQ4 84 aa9.2□□□□□ -0.94
VRK3-221ENST00000600284 TRGC2P03986 189 aa9.2□□□□□ -0.94
VRK3-221ENST00000600284 NDUFA12Q9UI09 145 aa9.2□□□□□ -0.94
VRK3-221ENST00000600284 LEPROTL1O95214 131 aa9.19□□□□□ -0.94
VRK3-221ENST00000600284 BOD1L2Q8IYS8 172 aa9.19□□□□□ -0.94
VRK3-221ENST00000600284 MIR7-3HGQ8N6C7 128 aa9.19□□□□□ -0.94
VRK3-221ENST00000600284 MAP1LC3CQ9BXW4 147 aa9.19□□□□□ -0.94
VRK3-221ENST00000600284 PRYO14603 147 aa9.18□□□□□ -0.94
VRK3-221ENST00000600284 HIGD2AQ9BW72 106 aa9.18□□□□□ -0.94
VRK3-221ENST00000600284 LINC00337Q8N6G1 96 aa9.17□□□□□ -0.94
VRK3-221ENST00000600284 KCNQ1DNQ9H478 68 aa9.17□□□□□ -0.94
VRK3-221ENST00000600284 ZNF706Q9Y5V0 76 aaPredicted RBP9.17□□□□□ -0.94
VRK3-221ENST00000600284 LOC107984156A0A0G2JMH3 177 aa9.16□□□□□ -0.94
VRK3-221ENST00000600284 H0Y8G0 127 aa9.16□□□□□ -0.94
VRK3-221ENST00000600284 PLNP26678 52 aa9.16□□□□□ -0.94
VRK3-221ENST00000600284 SPRR1AP35321 89 aa9.16□□□□□ -0.94
VRK3-221ENST00000600284 ARL17AQ8IVW1 177 aa9.16□□□□□ -0.94
VRK3-221ENST00000600284 LEPROTO15243 131 aa9.15□□□□□ -0.94
VRK3-221ENST00000600284 SERF1AO75920 110 aa9.15□□□□□ -0.94
VRK3-221ENST00000600284 LINC00310P59036 64 aa9.15□□□□□ -0.94
VRK3-221ENST00000600284 SPRR4Q96PI1 79 aa9.15□□□□□ -0.94
VRK3-221ENST00000600284 HSPB8Q9UJY1 196 aa9.15□□□□□ -0.94
VRK3-221ENST00000600284 MUC2Q02817 5179 aa9.14□□□□□ -0.95
VRK3-221ENST00000600284 NCR3O14931 201 aa9.14□□□□□ -0.95
VRK3-221ENST00000600284 S100A12P80511 92 aa9.14□□□□□ -0.95
VRK3-221ENST00000600284 SPAG11AQ6PDA7 123 aa9.14□□□□□ -0.95
VRK3-221ENST00000600284 C3orf22Q8N5N4 141 aa9.13□□□□□ -0.95
VRK3-221ENST00000600284 KRTAP4-16G5E9R7 235 aaPredicted RBP9.12□□□□□ -0.95
VRK3-221ENST00000600284 J3QQQ9 107 aa9.12□□□□□ -0.95
VRK3-221ENST00000600284 DPM2O94777 84 aa9.12□□□□□ -0.95
VRK3-221ENST00000600284 NMUP48645 174 aa9.12□□□□□ -0.95
VRK3-221ENST00000600284 TSPEAR-AS2P59090 65 aa9.12□□□□□ -0.95
VRK3-221ENST00000600284 HERVK_113P61574 105 aa9.12□□□□□ -0.95
VRK3-221ENST00000600284 TRBV10-3A0A0K0K1G6 114 aa9.11□□□□□ -0.95
VRK3-221ENST00000600284 TRBV10-2A0A0K0K1G8 114 aa9.11□□□□□ -0.95
VRK3-221ENST00000600284 ETDCA0A1B0GVM5 59 aa9.11□□□□□ -0.95
VRK3-221ENST00000600284 RETNLBQ9BQ08 111 aa9.11□□□□□ -0.95
VRK3-221ENST00000600284 COLCA2A8K830 154 aa9.1□□□□□ -0.95
VRK3-221ENST00000600284 IGKCP01834 107 aa9.1□□□□□ -0.95
VRK3-221ENST00000600284 FABP4P15090 132 aa9.1□□□□□ -0.95
VRK3-221ENST00000600284 SMCR5Q8TEV8 140 aa9.1□□□□□ -0.95
VRK3-221ENST00000600284 TPRXLQ17RH7 258 aa9.09□□□□□ -0.95
VRK3-221ENST00000600284 IGLV7-46A0A075B6I9 117 aa9.08□□□□□ -0.96
VRK3-221ENST00000600284 A0A0U1RQV1 116 aa9.08□□□□□ -0.96
VRK3-221ENST00000600284 LGALS3P17931 250 aaKnown RBP9.08□□□□□ -0.96
VRK3-221ENST00000600284 DAND5Q8N907 189 aa9.08□□□□□ -0.96
VRK3-221ENST00000600284 NDUFC2O95298 119 aa9.07□□□□□ -0.96
VRK3-221ENST00000600284 DDTP30046 118 aa9.07□□□□□ -0.96
VRK3-221ENST00000600284 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
VRK3-221ENST00000600284 MIEN1Q9BRT3 115 aa9.07□□□□□ -0.96
VRK3-221ENST00000600284 SPANXB1Q9NS25 103 aaPredicted RBP9.07□□□□□ -0.96
VRK3-221ENST00000600284 B5MCH6 92 aa9.06□□□□□ -0.96
VRK3-221ENST00000600284 LINC00483Q53H64 154 aa9.06□□□□□ -0.96
VRK3-221ENST00000600284 SLC7A5P1Q8MH63 180 aa9.06□□□□□ -0.96
VRK3-221ENST00000600284 PMCHL2Q9BQD1 86 aa9.06□□□□□ -0.96
VRK3-221ENST00000600284 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
VRK3-221ENST00000600284 E9PLD3 99 aa9.03□□□□□ -0.96
VRK3-221ENST00000600284 IGLV6-57P01721 117 aa9.03□□□□□ -0.96
VRK3-221ENST00000600284 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
VRK3-221ENST00000600284 Q8NBF4 154 aa9.03□□□□□ -0.96
VRK3-221ENST00000600284 PPDPFQ9H3Y8 114 aa9.03□□□□□ -0.96
VRK3-221ENST00000600284 SPINK1P00995 79 aa9.02□□□□□ -0.97
VRK3-221ENST00000600284 S100A7L2Q5SY68 101 aa9.02□□□□□ -0.97
VRK3-221ENST00000600284 Q6ZRX8 168 aa9.02□□□□□ -0.97
VRK3-221ENST00000600284 A0A0J9YXY3 114 aa9.01□□□□□ -0.97
VRK3-221ENST00000600284 JOSD1Q15040 202 aaPredicted RBP9.01□□□□□ -0.97
VRK3-221ENST00000600284 GAGE2AQ6NT46 116 aa9.01□□□□□ -0.97
VRK3-221ENST00000600284 ERC2-IT1O76042 136 aa9□□□□□ -0.97
VRK3-221ENST00000600284 SSBP3-AS1Q7Z2R9 100 aa9□□□□□ -0.97
VRK3-221ENST00000600284 Q9BRP9 147 aa9□□□□□ -0.97
VRK3-221ENST00000600284 SYS1-DBNDD2H3BUS1 97 aa8.99□□□□□ -0.97
VRK3-221ENST00000600284 ADAMTSL4-AS1Q5T5F5 129 aa8.99□□□□□ -0.97
VRK3-221ENST00000600284 CBY1Q9Y3M2 126 aa8.99□□□□□ -0.97
VRK3-221ENST00000600284 MUC17Q685J3 4493 aa8.98□□□□□ -0.97
VRK3-221ENST00000600284 TRAV23DV6A0A075B6W5 121 aa8.98□□□□□ -0.97
VRK3-221ENST00000600284 RPS29P62273 56 aaKnown RBP8.98□□□□□ -0.97
VRK3-221ENST00000600284 SOSTDC1Q6X4U4 206 aa8.98□□□□□ -0.97
VRK3-221ENST00000600284 HIST1H2BKO60814 126 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 231.9 ms