RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 LINC01561Q8N1V8 128 aa7.11□□□□□ -1.27
HOMER3-211ENST00000599808 TOMM6Q96B49 74 aa7.11□□□□□ -1.27
HOMER3-211ENST00000599808 VAMP8Q9BV40 100 aa7.11□□□□□ -1.27
HOMER3-211ENST00000599808 TP73-AS1Q9UF72 201 aa7.11□□□□□ -1.27
HOMER3-211ENST00000599808 CRCT1Q9UGL9 99 aa7.11□□□□□ -1.27
HOMER3-211ENST00000599808 FSIP2Q5CZC0 6907 aa7.11□□□□□ -1.27
HOMER3-211ENST00000599808 PRSS2P07478 247 aa7.1□□□□□ -1.27
HOMER3-211ENST00000599808 G0S2P27469 103 aa7.1□□□□□ -1.27
HOMER3-211ENST00000599808 CKS1BP61024 79 aa7.1□□□□□ -1.27
HOMER3-211ENST00000599808 TOMM7Q9P0U1 55 aa7.1□□□□□ -1.27
HOMER3-211ENST00000599808 PYGO1Q9Y3Y4 419 aa7.1□□□□□ -1.27
HOMER3-211ENST00000599808 RPL37AP8A6NKH3 93 aa7.09□□□□□ -1.27
HOMER3-211ENST00000599808 FAM229BQ4G0N7 80 aa7.09□□□□□ -1.27
HOMER3-211ENST00000599808 KRTAP13-1Q8IUC0 172 aa7.09□□□□□ -1.27
HOMER3-211ENST00000599808 TMEM141Q96I45 108 aa7.09□□□□□ -1.27
HOMER3-211ENST00000599808 LINC00167Q96N53 147 aa7.09□□□□□ -1.27
HOMER3-211ENST00000599808 PRO1933Q9H354 126 aa7.09□□□□□ -1.27
HOMER3-211ENST00000599808 C6orf226Q5I0X4 101 aa7.08□□□□□ -1.28
HOMER3-211ENST00000599808 ZC2HC1BQ5TFG8 222 aa7.08□□□□□ -1.28
HOMER3-211ENST00000599808 C2orf66Q6UXQ4 117 aa7.08□□□□□ -1.28
HOMER3-211ENST00000599808 Q6ZN92 141 aa7.08□□□□□ -1.28
HOMER3-211ENST00000599808 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
HOMER3-211ENST00000599808 PAM16Q9Y3D7 125 aa7.08□□□□□ -1.28
HOMER3-211ENST00000599808 TRAV12-1A0A0B4J245 112 aa7.07□□□□□ -1.28
HOMER3-211ENST00000599808 LINC00587B1AMM8 73 aa7.07□□□□□ -1.28
HOMER3-211ENST00000599808 DDTP30046 118 aa7.07□□□□□ -1.28
HOMER3-211ENST00000599808 SPATA45Q537H7 98 aa7.07□□□□□ -1.28
HOMER3-211ENST00000599808 Q8IZM0 81 aa7.07□□□□□ -1.28
HOMER3-211ENST00000599808 ATOH7Q8N100 152 aa7.07□□□□□ -1.28
HOMER3-211ENST00000599808 CYSLTR1Q9Y271 337 aa7.07□□□□□ -1.28
HOMER3-211ENST00000599808 GAGE10A6NGK3 116 aa7.06□□□□□ -1.28
HOMER3-211ENST00000599808 LINC01547P58512 204 aaPredicted RBP7.06□□□□□ -1.28
HOMER3-211ENST00000599808 ERASQ7Z444 233 aa7.06□□□□□ -1.28
HOMER3-211ENST00000599808 SCGB3A1Q96QR1 104 aa7.06□□□□□ -1.28
HOMER3-211ENST00000599808 TIMM17AQ99595 171 aa7.06□□□□□ -1.28
HOMER3-211ENST00000599808 IGKV2D-26A0A0A0MRZ7 120 aa7.05□□□□□ -1.28
HOMER3-211ENST00000599808 IGIPA6NJ69 53 aa7.05□□□□□ -1.28
HOMER3-211ENST00000599808 F8VRH5 84 aa7.05□□□□□ -1.28
HOMER3-211ENST00000599808 H0Y8G0 127 aa7.05□□□□□ -1.28
HOMER3-211ENST00000599808 IGLC3P0DOY3 106 aa7.05□□□□□ -1.28
HOMER3-211ENST00000599808 UBE2AP49459 152 aa7.05□□□□□ -1.28
HOMER3-211ENST00000599808 CTAG1AP78358 180 aa7.05□□□□□ -1.28
HOMER3-211ENST00000599808 MIEN1Q9BRT3 115 aa7.05□□□□□ -1.28
HOMER3-211ENST00000599808 C2orf88Q9BSF0 95 aa7.05□□□□□ -1.28
HOMER3-211ENST00000599808 AMELXQ99217 191 aa7.04□□□□□ -1.28
HOMER3-211ENST00000599808 PMCHL2Q9BQD1 86 aa7.04□□□□□ -1.28
HOMER3-211ENST00000599808 HSBP1L1C9JCN9 74 aa7.03□□□□□ -1.28
HOMER3-211ENST00000599808 NPSP0C0P6 89 aa7.03□□□□□ -1.28
HOMER3-211ENST00000599808 KRTAP4-1Q9BYQ7 146 aa7.03□□□□□ -1.28
HOMER3-211ENST00000599808 UQCR10Q9UDW1 63 aa7.03□□□□□ -1.28
HOMER3-211ENST00000599808 DPM2O94777 84 aa7.02□□□□□ -1.29
HOMER3-211ENST00000599808 IGKCP01834 107 aa7.02□□□□□ -1.29
HOMER3-211ENST00000599808 FAM19A3Q7Z5A8 133 aa7.02□□□□□ -1.29
HOMER3-211ENST00000599808 VCX2Q9H322 139 aa7.02□□□□□ -1.29
HOMER3-211ENST00000599808 CDKN2A-AS1Q9UH64 79 aa7.02□□□□□ -1.29
HOMER3-211ENST00000599808 IGLV5-37A0A075B6J1 123 aa7.01□□□□□ -1.29
HOMER3-211ENST00000599808 PLNP26678 52 aa7.01□□□□□ -1.29
HOMER3-211ENST00000599808 ASB16-AS1Q495Z4 193 aa7.01□□□□□ -1.29
HOMER3-211ENST00000599808 CXCL5P42830 114 aa7□□□□□ -1.29
HOMER3-211ENST00000599808 PRLHP81277 87 aa7□□□□□ -1.29
HOMER3-211ENST00000599808 C3orf22Q8N5N4 141 aa7□□□□□ -1.29
HOMER3-211ENST00000599808 C14orf144Q96I85 54 aa7□□□□□ -1.29
HOMER3-211ENST00000599808 CHTOPQ9Y3Y2 248 aaKnown RBP7□□□□□ -1.29
HOMER3-211ENST00000599808 IGKV2-28A0A075B6P5 120 aa6.99□□□□□ -1.29
HOMER3-211ENST00000599808 IGKV2D-28P01615 120 aa6.99□□□□□ -1.29
HOMER3-211ENST00000599808 COX8AP10176 69 aa6.99□□□□□ -1.29
HOMER3-211ENST00000599808 HERVK_113P63121 156 aa6.99□□□□□ -1.29
HOMER3-211ENST00000599808 PMVKQ15126 192 aa6.99□□□□□ -1.29
HOMER3-211ENST00000599808 KRTAP13-3Q3SY46 172 aa6.99□□□□□ -1.29
HOMER3-211ENST00000599808 ANKRD39Q53RE8 183 aa6.99□□□□□ -1.29
HOMER3-211ENST00000599808 PAPPA-AS1Q5QFB9 102 aa6.99□□□□□ -1.29
HOMER3-211ENST00000599808 LINC00337Q8N6G1 96 aa6.99□□□□□ -1.29
HOMER3-211ENST00000599808 NKAPP1Q8N9T2 125 aa6.99□□□□□ -1.29
HOMER3-211ENST00000599808 DLEU1O43261 78 aa6.98□□□□□ -1.29
HOMER3-211ENST00000599808 SLC25A34Q6PIV7 304 aa6.98□□□□□ -1.29
HOMER3-211ENST00000599808 FP248Q71RG6 208 aaPredicted RBP6.98□□□□□ -1.29
HOMER3-211ENST00000599808 CST9LQ9H4G1 147 aa6.98□□□□□ -1.29
HOMER3-211ENST00000599808 SEC11AP67812 179 aa6.97□□□□□ -1.29
HOMER3-211ENST00000599808 FAM19A1Q7Z5A9 133 aa6.97□□□□□ -1.29
HOMER3-211ENST00000599808 GEMIN7Q9H840 131 aaKnown RBP6.97□□□□□ -1.29
HOMER3-211ENST00000599808 SMIM1B2RUZ4 78 aa6.96□□□□□ -1.3
HOMER3-211ENST00000599808 SPAG11AQ6PDA7 123 aa6.96□□□□□ -1.3
HOMER3-211ENST00000599808 BOD1L2Q8IYS8 172 aa6.96□□□□□ -1.3
HOMER3-211ENST00000599808 PLEKHB2Q96CS7 222 aa6.96□□□□□ -1.3
HOMER3-211ENST00000599808 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
HOMER3-211ENST00000599808 COX7B2Q8TF08 81 aa6.95□□□□□ -1.3
HOMER3-211ENST00000599808 TMEM126AQ9H061 195 aa6.95□□□□□ -1.3
HOMER3-211ENST00000599808 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
HOMER3-211ENST00000599808 E9PLD3 99 aa6.93□□□□□ -1.3
HOMER3-211ENST00000599808 M0R143 59 aa6.93□□□□□ -1.3
HOMER3-211ENST00000599808 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
HOMER3-211ENST00000599808 C2orf91Q6ZV80 131 aa6.93□□□□□ -1.3
HOMER3-211ENST00000599808 SNHG12Q9BXW3 62 aa6.93□□□□□ -1.3
HOMER3-211ENST00000599808 M0R378 163 aa6.92□□□□□ -1.3
HOMER3-211ENST00000599808 NMUP48645 174 aa6.92□□□□□ -1.3
HOMER3-211ENST00000599808 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
HOMER3-211ENST00000599808 PCP2Q8IVA1 136 aa6.92□□□□□ -1.3
HOMER3-211ENST00000599808 VPREB1P12018 145 aa6.91□□□□□ -1.3
HOMER3-211ENST00000599808 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
HOMER3-211ENST00000599808 HIGD1BQ9P298 99 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms