RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 LRP4O75096 1905 aa8.2□□□□□ -1.1
SCN8A-208ENST00000599343 ACYP2P14621 99 aa8.2□□□□□ -1.1
SCN8A-208ENST00000599343 FHL3Q13643 280 aa8.2□□□□□ -1.1
SCN8A-208ENST00000599343 IGHV3OR16-9A0A0B4J2B5 98 aa8.19□□□□□ -1.1
SCN8A-208ENST00000599343 FN1P02751 2386 aaKnown RBP8.19□□□□□ -1.1
SCN8A-208ENST00000599343 IGLV8-61A0A075B6I0 122 aa8.19□□□□□ -1.1
SCN8A-208ENST00000599343 LINC01546A6NGU7 62 aa8.19□□□□□ -1.1
SCN8A-208ENST00000599343 PLA2G1BP04054 148 aaKnown RBP8.19□□□□□ -1.1
SCN8A-208ENST00000599343 MUC4Q99102 2169 aa8.18□□□□□ -1.1
SCN8A-208ENST00000599343 COL5A1P20908 1838 aaPredicted RBP8.17□□□□□ -1.1
SCN8A-208ENST00000599343 TP53AIP1Q9HCN2 124 aa8.17□□□□□ -1.1
SCN8A-208ENST00000599343 MDFIQ99750 246 aa8.17□□□□□ -1.1
SCN8A-208ENST00000599343 USP9YO00507 2555 aaPredicted RBP8.17□□□□□ -1.1
SCN8A-208ENST00000599343 LINC00315P59091 139 aa8.16□□□□□ -1.1
SCN8A-208ENST00000599343 RPL37AP61513 92 aaKnown RBP8.16□□□□□ -1.1
SCN8A-208ENST00000599343 PHF5AQ7RTV0 110 aaKnown RBP8.16□□□□□ -1.1
SCN8A-208ENST00000599343 PKD1L2Q7Z442 2459 aa8.15□□□□□ -1.1
SCN8A-208ENST00000599343 ELOF1P60002 83 aaKnown RBP8.15□□□□□ -1.1
SCN8A-208ENST00000599343 Q6ZQT0 140 aa8.15□□□□□ -1.1
SCN8A-208ENST00000599343 TET2Q6N021 2002 aaPredicted RBP8.15□□□□□ -1.1
SCN8A-208ENST00000599343 LINC00476Q8WZB0 136 aa8.15□□□□□ -1.11
SCN8A-208ENST00000599343 CENPFP49454 3210 aa8.15□□□□□ -1.11
SCN8A-208ENST00000599343 CHTF8P0CG12 524 aa8.15□□□□□ -1.11
SCN8A-208ENST00000599343 ATP11AUNQ6ZP68 121 aa8.15□□□□□ -1.11
SCN8A-208ENST00000599343 ST20-AS1Q8NBB2 130 aa8.14□□□□□ -1.11
SCN8A-208ENST00000599343 TM2D3Q9BRN9 247 aa8.13□□□□□ -1.11
SCN8A-208ENST00000599343 PRO0461Q9UI25 63 aa8.13□□□□□ -1.11
SCN8A-208ENST00000599343 FAM19A4Q96LR4 140 aa8.12□□□□□ -1.11
SCN8A-208ENST00000599343 CEP295Q9C0D2 2601 aa8.12□□□□□ -1.11
SCN8A-208ENST00000599343 SPINT4Q6UDR6 99 aa8.11□□□□□ -1.11
SCN8A-208ENST00000599343 LINC00313P59037 77 aa8.1□□□□□ -1.11
SCN8A-208ENST00000599343 Q6ZRX8 168 aa8.1□□□□□ -1.11
SCN8A-208ENST00000599343 Q8NBF4 154 aa8.1□□□□□ -1.11
SCN8A-208ENST00000599343 ADAMTS20P59510 1910 aa8.1□□□□□ -1.11
SCN8A-208ENST00000599343 IGLV5-45A0A087WSX0 123 aa8.1□□□□□ -1.11
SCN8A-208ENST00000599343 EPM2AB3EWF7 344 aa8.1□□□□□ -1.11
SCN8A-208ENST00000599343 BCE1O60756 84 aa8.09□□□□□ -1.11
SCN8A-208ENST00000599343 NHLRC4P0CG21 123 aaPredicted RBP8.09□□□□□ -1.11
SCN8A-208ENST00000599343 LOC110117498A0A087WWA1 95 aa8.09□□□□□ -1.12
SCN8A-208ENST00000599343 TRAV22A0A0B4J277 110 aa8.09□□□□□ -1.12
SCN8A-208ENST00000599343 LRRK2Q5S007 2527 aa8.08□□□□□ -1.12
SCN8A-208ENST00000599343 ANKRD11Q6UB99 2663 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-208ENST00000599343 ZNF462Q96JM2 2506 aa8.07□□□□□ -1.12
SCN8A-208ENST00000599343 C8orf87E5RJ46 101 aa8.07□□□□□ -1.12
SCN8A-208ENST00000599343 RPS28P62857 69 aaKnown RBP8.06□□□□□ -1.12
SCN8A-208ENST00000599343 RTL8CO15255 209 aa8.06□□□□□ -1.12
SCN8A-208ENST00000599343 H3BPC8 53 aa8.05□□□□□ -1.12
SCN8A-208ENST00000599343 Q96NJ1 140 aa8.05□□□□□ -1.12
SCN8A-208ENST00000599343 TYMSOSQ8TAI1 123 aa8.05□□□□□ -1.12
SCN8A-208ENST00000599343 UTRNP46939 3433 aa8.03□□□□□ -1.12
SCN8A-208ENST00000599343 A0A1B0GW54 56 aa8.03□□□□□ -1.12
SCN8A-208ENST00000599343 SSBP3-AS1Q7Z2R9 100 aa8.02□□□□□ -1.13
SCN8A-208ENST00000599343 TRBV7-4A0A0J9YYF1 115 aa8.02□□□□□ -1.13
SCN8A-208ENST00000599343 FAM168BA1KXE4 195 aa8.02□□□□□ -1.13
SCN8A-208ENST00000599343 C16orf90A8MZG2 172 aa8.01□□□□□ -1.13
SCN8A-208ENST00000599343 K7EQZ3 153 aa8.01□□□□□ -1.13
SCN8A-208ENST00000599343 MTORP42345 2549 aa8□□□□□ -1.13
SCN8A-208ENST00000599343 A8MUN3 132 aa8□□□□□ -1.13
SCN8A-208ENST00000599343 Q6ZRP5 223 aa8□□□□□ -1.13
SCN8A-208ENST00000599343 CHD8Q9HCK8 2581 aa8□□□□□ -1.13
SCN8A-208ENST00000599343 LINC00588Q9Y4M8 146 aa8□□□□□ -1.13
SCN8A-208ENST00000599343 COA5Q86WW8 74 aa7.99□□□□□ -1.13
SCN8A-208ENST00000599343 H3BNG1 76 aa7.99□□□□□ -1.13
SCN8A-208ENST00000599343 LINC01600Q96MT4 127 aa7.99□□□□□ -1.13
SCN8A-208ENST00000599343 NBDYA0A0U1RRE5 68 aa7.98□□□□□ -1.13
SCN8A-208ENST00000599343 FAM229AH3BQW9 127 aa7.97□□□□□ -1.13
SCN8A-208ENST00000599343 LITAFQ99732 161 aa7.97□□□□□ -1.13
SCN8A-208ENST00000599343 A8MWP4 228 aa7.97□□□□□ -1.13
SCN8A-208ENST00000599343 PTPRBP23467 1997 aa7.97□□□□□ -1.13
SCN8A-208ENST00000599343 LOC101927531A0A1B0GV80 90 aa7.97□□□□□ -1.13
SCN8A-208ENST00000599343 GVQW2A0A096LPI5 108 aaPredicted RBP7.97□□□□□ -1.13
SCN8A-208ENST00000599343 Q8NAQ8 132 aa7.95□□□□□ -1.14
SCN8A-208ENST00000599343 MRPL34Q9BQ48 92 aaKnown RBP7.95□□□□□ -1.14
SCN8A-208ENST00000599343 VPREB1P12018 145 aa7.95□□□□□ -1.14
SCN8A-208ENST00000599343 SPTBN4Q9H254 2564 aa7.95□□□□□ -1.14
SCN8A-208ENST00000599343 IGLV6-57P01721 117 aa7.94□□□□□ -1.14
SCN8A-208ENST00000599343 APLNQ9ULZ1 77 aa7.94□□□□□ -1.14
SCN8A-208ENST00000599343 F8P00451 2351 aa7.94□□□□□ -1.14
SCN8A-208ENST00000599343 COL27A1Q8IZC6 1860 aaPredicted RBP7.93□□□□□ -1.14
SCN8A-208ENST00000599343 DSCR10P59022 87 aa7.93□□□□□ -1.14
SCN8A-208ENST00000599343 KRTAP24-1Q3LI83 254 aa7.92□□□□□ -1.14
SCN8A-208ENST00000599343 UQCR11O14957 56 aa7.9□□□□□ -1.15
SCN8A-208ENST00000599343 IGLV1-50A0A075B6I6 118 aa7.89□□□□□ -1.15
SCN8A-208ENST00000599343 IGFL1Q6UW32 110 aa7.88□□□□□ -1.15
SCN8A-208ENST00000599343 A0A0G2JQZ4 141 aa7.88□□□□□ -1.15
SCN8A-208ENST00000599343 A0A1W2PNN7 141 aa7.88□□□□□ -1.15
SCN8A-208ENST00000599343 CYP4F30PQ9H0H9 118 aa7.88□□□□□ -1.15
SCN8A-208ENST00000599343 ERC2-IT1O76042 136 aa7.87□□□□□ -1.15
SCN8A-208ENST00000599343 MIR22HGQ0VDD5 57 aa7.87□□□□□ -1.15
SCN8A-208ENST00000599343 EIF4EBP3O60516 100 aaPredicted RBP7.87□□□□□ -1.15
SCN8A-208ENST00000599343 C9orf92A6NGG3 77 aa7.86□□□□□ -1.15
SCN8A-208ENST00000599343 DNAH10OSP0CZ25 163 aa7.86□□□□□ -1.15
SCN8A-208ENST00000599343 C8orf17Q9NRJ1 99 aa7.86□□□□□ -1.15
SCN8A-208ENST00000599343 POLQO75417 2590 aa7.86□□□□□ -1.15
SCN8A-208ENST00000599343 CRIPTQ9P021 101 aa7.85□□□□□ -1.15
SCN8A-208ENST00000599343 KCNQ1DNQ9H478 68 aa7.85□□□□□ -1.15
SCN8A-208ENST00000599343 OBSCN-AS1Q96MR7 158 aa7.84□□□□□ -1.15
SCN8A-208ENST00000599343 FASNP49327 2511 aaKnown RBP7.84□□□□□ -1.15
SCN8A-208ENST00000599343 LINC00528Q8N1L1 170 aa7.84□□□□□ -1.15
SCN8A-208ENST00000599343 DNAH12Q6ZR08 3092 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms